Pseudoliparis swirei (Mariana hadal snailfish): 130198597
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Entry
130198597 CDS
T09868
Symbol
astn1
Name
(RefSeq) astrotactin-1 isoform X1
KO
K24479
astrotactin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130198597 (astn1)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130198597 (astn1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
Annexin_2
ASTN1_2_fn3
FXa_inhibition
TM_ErbB1
fn3
NDNF
MACPF
Motif
Other DBs
NCBI-GeneID:
130198597
NCBI-ProteinID:
XP_056277795
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All DBs
Position
8:complement(20475169..20938129)
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AA seq
1307 aa
AA seq
DB search
MASVNMGPRPLPRPLLLLLLGLAWVLMAALAPGVRGLNGHEDQDTECKMKSVTVSALPFL
RENDLSIMHSPSASEPKLLFSVRNDFPGDVLVVDDLENTELPFFVLEISGNSEDIPLVRW
KQQWLENGTLLFHIHHQDGGLGPPEPTGHPATDSAKEELRILHISVMGGMIALLLSILFL
VLILYTRRRWCKRRRIPQPQKSASAEAANEIHYIPSVLMGGQARESLRNSRGQGPNSSGT
LSIRETTILDGYEYDITDLRHHLQRECMNGGEEFASQVTRTLDSLQGCNDKNSMDLTPVS
DNTKLALMNKYKDNIIATNPIDSNHQQNTLLPHNTSTSQRKRLSNNTRAGSTFLNPDGDS
GTEADSEPQLAFYTDPNRSRRRSRGSPRSPINKTTLTLISVISCVIGLVYSSHMSCSIAV
RVILHVPEHLIADGSRFILLQGSQLDASDWLNPAQILLYYQQNSSGPWLGELCGRRLLDP
CEHQCDQETGQCLCLDGYMKDPVHKHLCIRSEWGPNQGPWPYTIFQRGFDLVMGEQPSDR
IFRFTYTLGEGMWLPLSKSFVIPPAELAINPSAKCKTDMTVMEDAVDVREELMISSSFES
LEVLLDSFGPVRDCTKDNGGCSRNFRCISDRKLDSTGCMCPPGLSPMKDGTGCYDHHIGI
DCSDGFNGGCEQLCLQQLAPLEDDPTLYNIQMFCGCIEDYKRGPDGRSCLPLSEACTEGI
DCAEATDIPANQTVFGDLFYGFNNHTKESTSGQILRATFRQKNYARGIEQQLPDGMVVAS
VPTEVQCHEELSDPVPDPEYLTGMVNYSEVSGYPLVQHWSLRSVLYHVKLNQWVLSQAFS
LAIHSLDGATQRGDFVSILREFGNHYVQEAMYGFQESCTIWYPNKQVQRQLWLEYQDISK
GNSPSEESEERDKEPRTLTYPAYIASLLDTGSKRMAAGVRMDCNSQGQCPRSCHLCHMSP
RVVQGRQRSEPVLLQITKSAPIYELVSNNETYQALQEAMMSMLWCSCKGAVIDDWCRCDS
SAFGADGLPTCAPLPHPMLKLSYTYEPSSSLVIMEWNHTEPPIGVRIVDYLISQEKVTER
TDHSKVETETLLSFVDDILSGARSPCVMLGDIPNILSSSISMIIRCLDPDTTYMFRLWAV
DNTGRRSSPSEVTIKTPCPTVDDVKSQEIADKIYNLFNGYTSGKEQQTAYNTLMDLGAPT
LHRVLYHYNQRYASFGEFTWRCEDELGPRKAGLILTQLDELSPWCKALLLEQKIGLRRMS
LKFLSCRYTDTKAFGLNWSHMGQDVHKACNEQTLAVMYNDYGEPKEL
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgtcaacatggggccgagaccgctgccgcgtccgctgctgctgctgctgctg
gggctcgcgtgggtcctcatggccgccctcgcgcccggcgtccgaggtctgaacggccac
gaggaccaggacaccgagtgcaagatgaagagcgtcaccgtgtcggcgctgccgtttctg
cgggagaacgacctgagcatcatgcacagtccgtcggcctccgagcccaagctgctgttc
tccgtgcggaacgatttccccggcgacgtcctggtggtggacgacctggagaacacagag
ctcccgttcttcgtcctcgagatctctggtaattccgaggacatccccctggtgcgctgg
aagcagcagtggctggagaacggcacactgctcttccacatccaccaccaggacggcggc
ctgggccccccggagcccaccggacacccggccaccgactcggccaaggaggagctccgc
atcctgcacatctccgtcatgggcgggatgatcgcccttctgctgtccatcctgttcttg
gtcctgatcctctacacccgccgccgctggtgtaagcgccgccgcatcccccagccgcag
aagagcgccagcgccgaggcggcgaacgagatccactacatcccctcggtgctgatggga
ggccaggcccgagagagcttgaggaactctaggggtcaggggcccaactccagcggcacc
ctcagcatccgggagacaacgattttggacgggtacgagtatgacataacggacctgcgc
caccacctgcagcgggagtgtatgaatgggggcgaggagttcgccagccaggtcaccaga
accctggactccctccagggctgtaatgacaagaatagtatggacctcacgcctgtgagc
gacaacaccaagctggccctgatgaacaagtacaaggacaacatcatcgccacgaatccc
atcgacagcaaccaccagcagaacacgctgctgccgcacaacacctccaccagccagcgc
aagcgcctctccaacaacacccgcgcgggttcaacattcttgaacccagacggggactct
ggaacggaggccgacagcgagcctcagctggccttttacaccgaccccaaccgcagccgg
cgccggagtcgaggttccccgcggagccccatcaataagaccaccctgacgttgatcagc
gtcatcagctgcgtgatcggcctggtctactcctcacacatgtcctgcagcatcgcggtg
cgcgtgatcctgcacgtgccggagcacctcatcgccgacggatccaggttcatcttgctg
caggggagccagctggacgcctcggactggctgaacccggcgcagatcttgttgtactac
cagcagaattccagcgggccgtggctcggcgagctgtgcggacggcgcctcctggacccc
tgcgagcaccagtgtgaccaggagacaggacaatgcctttgcctcgacggctacatgaag
gacccggtccacaagcacctctgcatccgcagtgagtgggggcccaatcagggtccctgg
ccttacaccatcttccagcgcgggtttgatctggtgatgggagaacagccctctgatcgc
attttcagattcacatacaccttaggagaagggatgtggctgccgttgagcaagagcttc
gtcatcccgcccgccgagctcgccatcaacccctcggccaagtgcaagacggacatgacg
gtcatggaggacgcggtggacgtacgagaggagctgatgatcagctcgtccttcgaatcg
ttggaggtcctcctggactcgttcgggcccgtcagggactgcaccaaagacaacggaggc
tgcagccgcaacttccgctgcatttcggaccgaaagctggactccaccggatgcatgtgc
cctccgggtttgagccccatgaaggatgggactgggtgctacgaccaccacatcggcatc
gactgctccgacggtttcaacggcgggtgcgagcagctgtgcctccagcagctggcgcct
ctagaggatgacccgacgctctacaacatccagatgttctgcgggtgcatcgaggactac
aagcgcggtccagacgggaggtcgtgcttgccgctgtccgaggcctgcaccgagggcatc
gactgcgccgaggcgacggacatccccgctaaccagacggtgttcggagacctgttctac
ggattcaacaaccacaccaaagagagcacctccggacagattctcagggccacgttcagg
cagaagaactacgcccgcggcatcgagcagcagctcccggacggcatggtggtggcgtcg
gtgccaacggaggtccagtgccacgaggagctgtcagaccccgtccccgacccagagtac
ctcacaggtatggtgaactacagcgaggtgtccggctacccgctggttcagcactggagc
ctccgctcggtgctctaccacgtcaaactcaatcagtgggtcctctctcaagccttcagc
ttggccatccattctctggacggtgcgacgcagcgtggcgactttgtctccatcctcagg
gagtttggcaaccactacgtgcaggaggcgatgtacggcttccaggagtcctgtaccatc
tggtaccccaacaaacaggtccagagacagctgtggctggagtaccaggacattagcaaa
ggaaactcgccctcagaggagtcggaggagcgcgacaaggagccccggacgctgacctac
cccgcgtacatcgccagcctgctggacacgggctccaagcgcatggcggccggcgtccgc
atggactgcaacagccagggccagtgcccacgctcctgccacctctgccacatgagcccc
agggtggtgcaggggcggcagcggtccgagcccgtcctgctgcagatcaccaaatccgcg
ccaatatacgagctggtgtccaacaacgagacctaccaggctttgcaggaggcgatgatg
agcatgctgtggtgttcgtgcaaaggcgccgtcatcgacgactggtgccggtgcgactcc
agcgctttcggcgcagacggactgcccacctgcgccccgcttccccatcccatgctgaag
ctgtcctacacctacgagcccagcagctcattggtcatcatggagtggaaccacaccgag
ccgccaatcggagtgcggatcgtcgattacctcataagccaggagaaggtgacggagagg
accgaccactccaaagttgagacagaaacccttttgagcttcgtggacgacatcctgtct
ggggccagatctccgtgcgtgatgttaggggacatccccaacatcctgtcctcgtccatc
agcatgatcatccgctgcctggaccctgacaccacatacatgttccggctgtgggccgta
gacaacacaggccgccgttccagtccaagtgaggtcaccatcaagactccgtgtccaact
gtggatgatgtcaaatctcaagaaatagccgacaagatctacaacctgttcaatggttac
accagcgggaaagagcagcagacggcctacaacactctgatggacctgggcgccccaacg
ctgcaccgcgtgctctaccactacaaccagcgctacgcgagctttggggaattcacctgg
aggtgtgaggatgagctgggacccaggaaggccggcctcatcctcacccagctcgatgaa
ctgtccccgtggtgtaaggctcttcttctggagcagaagatcggcctccgcaggatgtcc
ctcaagttcctgtcctgccgctacaccgacaccaaggcctttgggctgaattggtcgcac
atgggtcaggacgtacacaaggcctgcaacgagcagacgctcgcagtcatgtataacgac
tacggcgagcccaaggagctgtga
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