Pseudoliparis swirei (Mariana hadal snailfish): 130198600
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Entry
130198600 CDS
T09868
Name
(RefSeq) rho GTPase-activating protein 29-like isoform X1
KO
K20644
Rho GTPase-activating protein 29
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130198600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130198600
Membrane trafficking [BR:
pswi04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
130198600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
GMIP-like_FCH
RHG29_45_N
C1_1
PhoQ_Sensor
Motif
Other DBs
NCBI-GeneID:
130198600
NCBI-ProteinID:
XP_056277799
LinkDB
All DBs
Position
8:complement(8165229..8198481)
Genome browser
AA seq
1374 aa
AA seq
DB search
MLRKSSSSGGSGTENTQGLPGHISKPHIGSLSAGSTKTWDMGRSSNNPNPLSSMGLTSHL
VGAPGVDPEYVMHLVNDVRGFADVLLNLKEAFQCKENPEGLQCLVQERLAELLRVLKAII
SKHQTLNSVDILGAAGTVIAKVKGINFKEENQENIKAIFGEIHISIDTLAFTFGNVVSDF
LMGDVDSGSGLGTPLTRRSRSFDNLSVDPEGYASEKNDLVEVPLTREEEVDLTLLKNDSG
VESALLYAKAWSKYIKDLLAWMEKRLALDIEYGKSCAKMSESAKTLVSQQVFMPFSDVYV
SSFKNDIEYKQLLIQTAMSLQTNKFIQPLLVRKNELDKLRKDIKEQWQREQKKMHEADAT
LRKARVLKAQRREEYQKAHSSTNRSQEEQSNAGNKQLEKKRKLEEEALQKAEEAQDQSQI
CMADAGVRRMDLANTKSSILTQIREMVFQCDLTLKAVTVNWFQMQQTQTVSLPAHYQTLS
ESAKLYEPGECYAEFVRNLPKNLPKEHVHLDSTSSDNTRFVFNKRSIGSTHSSHGNLSQA
SITSCDVLSGDEVDSPLQGPAKIRERRSNSSTDIQALRSEAPLKAWASSSQGSQSGMCSD
SESAGGSSESRSMDSPPASPGDFKRQLPRTPSTGTMSSADDLDEREPPSDNGLAEMVTET
ASSPGPFRNAQMSKAAQTHKLRKLRAPSKCRECDSLVVFHGAECEECSLACHKKCLETLA
IQCGHKKLQGRLQLFGIDFVQAAKNSADGIPFIIKKCTSEIESRALNIKGIYRVNAAKSR
VEKLCQAFENGKDLVELSDLSPHDISNVLKLYLRQLPEPLIQYRYYNDIIGLAKECQRVI
VEEVGKPQSTQPGQKGGASIQLHKVILKIRDLLRQLPTANYRTLRFLIAHLNRVTEQAEE
NKMTASNLGIIFGPTLVKPRQTDAEVSLSSLVDYPYQALMVELLVRHFHTVFDVSLLSGS
DITTTGQASPRLTPLEKLQRLSRHSTSLVDIKENAKVYKRYSSVTPSSHIMDELQEVQPG
TDRTAVSALDRLNGIQTSNEGEVQRSTLVFGRPSTTSAVASKVELRTQRTRHVSRPISMP
LERLPNPGRISERNYRNNAAKDGESSAEQDPISETIQEIPEPEKARQSGSSRVSTYYITP
FIDTQTMPRRTWDRKYKHYDVTPRTAMIVANLPSSASSGVQPVKATVAVTAATASVLPAT
CSVSTVFSNNPYTVSGKPGWTSKRENDADNSVGPSSSSPNLMLTLRAARTLQPPPGTFYK
PPVSINSRARTLPTWTATTTTTTTTTSSTAPTNSAQVVAPSPALTSLPRTRLQTQDSTDS
VIDPGVSTFTTLSPPQSPPPSSPDDLSPSDTKPVYQRLRTRRLQELEHREAHFV
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgctacggaagagcagcagtagtggtggcagtgggactgagaatacccagggtctgcca
ggacatatctccaagcctcacatcggatctctgtctgctggatccaccaagacctgggat
atgggccgcagctccaataacccaaatcctctgagcagcatggggctaacgtctcacctg
gtgggggcaccaggagtggatccggagtacgtaatgcatcttgtgaatgatgtacggggg
ttcgctgatgtgttactcaacctcaaggaggctttccagtgtaaagagaatccggaaggt
cttcagtgtctggtgcaggaacgcttggcagagttactccgcgtcctcaaggccatcatc
agcaaacaccagaccctcaactcagtggacatcctgggagcggctggcacggtcattgcc
aaggtgaaaggcattaacttcaaggaagagaaccaagaaaacataaaagctatatttggc
gagatacacatctccattgacaccttggcattcacattcggcaatgtagtttctgacttc
ctgatgggagatgtggacagtggctcagggttggggacccccctgaccaggagaagccgg
tcttttgacaatctctctgtggatcccgagggatacgcttcagagaaaaatgatcttgtg
gaggtgccgctgacacgggaggaagaagttgacttgaccctgctgaagaatgacagcggt
gtggagtccgctctactctacgccaaggcctggtccaagtatatcaaagaccttctggcc
tggatggagaagcgattggctctggatattgagtatggcaaaagctgtgcaaaaatgtct
gagtctgctaagacactggtcagtcaacaggtcttcatgccattcagtgatgtctacgtt
tcttcattcaagaacgacattgagtacaaacagctgctcattcaaactgcaatgtctctt
cagaccaataaattcatacagcctcttctggtccgtaaaaatgaactggacaagttgagg
aaagacatcaaggagcagtggcagagggagcaaaagaaaatgcatgaggcagatgcaacc
ttgcgtaaggcacgagtgctgaaggcccagaggagagaggagtaccagaaagcccactca
tctaccaaccgctcccaggaggagcagtccaatgctgggaacaaacagctggagaagaag
aggaagctcgaggaggaggctctgcagaaggcggaggaggcccaggaccagtcccagatc
tgtatggctgacgcaggcgtcaggagaatggatctggccaacaccaagagctccatcctc
acacaaatccgagagatggtcttccagtgtgacctcacactaaaagctgtgacagtgaac
tggtttcagatgcagcagacgcagaccgtgtcgctccctgcccactaccagaccctgagt
gagagcgccaagttgtacgaaccgggtgaatgctacgcagagttcgtccggaatctgccc
aaaaatctgcctaaagaacacgtgcacctagactccacctcctctgacaataccaggttt
gtgttcaacaaaaggtcaattggcagcactcactcctcccatggcaacctgtctcaggct
tccatcacctcctgtgatgtgttgagtggagacgaagtggacagtcccctacaggggcct
gctaagatcagggagcgcaggtccaacagcagcacggacatacaagcgctgagaagcgag
gccccgctgaaagcctgggcctccagtagccaggggagccagagtgggatgtgcagtgac
tcagagagtgcgggaggcagcagcgagtcaaggtccatggactcccctcctgccagtcca
ggtgacttcaaacgacaactgccaaggactccctccactgggaccatgtcttctgctgat
gacttggatgagagagagccgccctcggacaatggtctcgcagaaatggtgacggagacc
gccagttctccgggtcccttccgaaacgcccagatgtccaaagctgctcaaacccataag
ctgaggaaactacgcgccccgtcgaagtgcagagagtgtgacagtttggtggttttccat
ggagccgagtgtgaagagtgctccctggcctgccataagaagtgtctcgagacgctcgct
atccagtgtggccataaaaagctgcaaggaagactacagctgtttggtatcgactttgtc
caagcagcaaagaacagcgcagatggaatccccttcatcatcaagaagtgcacgtctgag
attgagagtcgagccctcaacatcaaggggatttatcgtgtgaatgctgccaaatcgcgt
gttgagaaactttgtcaggcgtttgaaaatgggaaggacttggtggagctctcggacctc
tcgcctcacgacatcagcaatgtgctcaaactctacctgagacagttaccagagccattg
atccagtatcgatactacaacgacattatcggcttggccaaagagtgccagagagtgatt
gtggaggaggtaggtaaacctcagagcacccagccaggacagaaggggggggcaagcatc
cagctccacaaagtcatcctcaagatccgagaccttctccgccagctgcctacagccaat
tacaggactctgcgtttccttattgcacacctcaacagagtgacggagcaggccgaggag
aacaagatgactgcgagtaacctgggcattatctttggccccacactggtcaagccacgg
cagaccgacgctgaggtgtccctttcctccctggtggactacccctaccaggccctgatg
gtggagctgctggtgcgacactttcacacagtctttgatgtgtcgcttttgtccggctct
gacattaccacgactggccaggcgtcccccaggctcacccccctcgagaagctgcagcgg
ctcagcagacactccacctccctggtggacatcaaagagaatgccaaagtgtacaaaaga
tactcgtcagtaaccccatcctcacacatcatggacgagcttcaggaggtccagccggga
acagacagaacagccgtctcagccctggacaggctcaacgggatccagacatctaatgaa
ggagaagtccagaggtcgaccttggtgtttggccgccccagcaccaccagcgctgtggca
tcaaaggtcgagctccgcacccagcgcaccagacatgtgtctcgaccgatcagcatgccg
ctggagcgcctgcccaaccccggccggatcagcgagaggaattaccgtaacaatgctgct
aaagatggcgaaagctctgctgagcaggacccgatctctgaaaccatacaggagataccg
gagccagaaaaggctcgccaaagcggctcatcacgggtcagcacgtactacatcacccct
ttcattgacacgcagacgatgccgaggagaacgtgggacaggaagtacaagcactatgat
gttacgcccaggaccgccatgatcgtggccaacctgccctcctctgccagctctggagtc
caacctgttaaggcaacggtggcggtcacagcggccacggcttctgtgctccccgccaca
tgtagtgtgagcaccgttttctccaacaacccctacacagtgtcaggcaagcctggctgg
acttctaaaagggagaacgatgcagataattcggtcggtccgtccagcagctcaccaaac
ctcatgttgacgcttagggcagcgagaactctgcagcctcccccgggaaccttctataag
ccccctgtttccatcaacagcagggcgaggacgcttccaacctggaccgctaccaccacc
accaccaccaccaccacctcatcgaccgcccccaccaactccgcccaggtagtcgccccg
tcccccgccctgacgagcctcccacggacacggctccagacacaggactccaccgacagc
gtcattgaccccggggtctcgaccttcacgaccctttcgcccccacagtccccgcccccg
agcagcccagacgatctcagccccagtgacactaaacccgtctaccaaagactgcgaact
cggcggctgcaggagctggagcacagagaggcccattttgtctga
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