Pseudoliparis swirei (Mariana hadal snailfish): 130198608
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Entry
130198608 CDS
T09868
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130198608
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Other domain-containing proteins
Patched domain-containing proteins
130198608
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
MMPL
Motif
Other DBs
NCBI-GeneID:
130198608
NCBI-ProteinID:
XP_056277807
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All DBs
Position
8:complement(9683892..9687514)
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AA seq
835 aa
AA seq
DB search
MARLRTNCIERPLRMCYEMLGHFIGSHPWWFLIAPLVLSAGLGSGFYLLEDRTSNDIEEQ
FTPLDGQAKLERKYIQETFPRNDSMFSRLRLSTDGNYATLIATSDRNILTVDSLQHILDL
DFRVRSMIVYFDNRSFEYADICAEVMGSCTSNDILDIIEYSANNIDTVNLTYPWYYSDSK
NIPLYLSLGSVKTYEESSVVESSEALQVHYYLREDNKTKTDLWLESFINLVSNKSSTSIQ
VSYSTSMSMQWEFRKTPASVIYLFSITYATAITFSIISCWRLDNVRTKVWVASCGVLSTG
LAVLSGFGALLLLDQPFVMTVASCPFMILGIGLDDMFIMISCWQRTRVLDSVPDRLADAY
KDAAVSISITTVTDALALFLGYSSPFGSVRSFCLYSGVSICFCYLYSITFLGACLALNGQ
REAENKHWFTCAKIPEDVPCRGSKAFRVCCVGGNYDRVTEKEETEPLSFMFERFYGPFLT
HKCIKACVFVFYAGYLAVSVYGCFILKEGFDIGNLALDDSYIVEYYNNQRQHFSEYRYNL
MVAVKHPLRYWDEDEQKLLRSCISSFESLNFVNGTFGWFLSFLQYANATNLNIGSQEAFR
THLLHFLDRNSMFKQDINFTADYKIQASRFFVQTLSNTTTKDLMIGLRKAAEESPVELLV
YHPAFIYFDQYTVIMDNTIQTILVAVIVMLVVSLLLIPSPLCSLWVAFAMCSVLVGVTGF
MALWGVNLDCISMIHLVMCIGFSVDFSAHISYSFVSSSKIDANEKAIDALAHLGYPILQG
ALSTILGVVVLSMSGSYIFRTFFKIVFLVISFGLLHGLVFIPVFLTLVGSRGAWC
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggccagactccgcacaaattgcatagagagacctctacgcatgtgctatgagatgttg
ggtcattttattggttcccatccctggtggttcttgatcgccccacttgttctctcggca
ggtctggggagcggattttatctcctggaggacagaacgtcgaacgatatcgaggagcag
ttcacaccactcgatggacaagccaagctggagaggaaatatatccaagaaactttccca
agaaacgattccatgttttcacgtttaagactgagcacggatgggaattatgcaactctc
atagctacgagtgaccggaatattctgactgtggattcactccagcacattctagacttg
gactttagagttcggagtatgatagtgtattttgacaaccgatcatttgaatatgctgat
atttgtgctgaggtgatgggatcctgcacctccaatgacattttagatattattgaatac
agtgccaacaatatagatactgtaaatttgacatatccgtggtattactccgattctaag
aatattcctttatatttaagtcttgggagtgtgaagacgtacgaggagagctcagtggtt
gaaagttctgaagccttacaggtccattactatttacgtgaggacaacaaaacaaagacc
gacctttggttggaaagcttcatcaatctggtctcaaacaaatcatcaacgtccattcag
gtgtcttactccacctccatgtcaatgcagtgggaatttagaaaaactcccgcatccgtc
atctatttattctccatcacctacgccactgccatcacattttcaatcatttcatgttgg
aggttggataatgtgaggacaaaggtgtgggtggcgtcctgcggggtgctctccacgggt
ctggccgtcctgagtggttttggtgcgctgctgttgctggatcaaccttttgtcatgaca
gtggcctcctgtcctttcatgatattaggtattggactggatgatatgttcatcatgatc
tcttgctggcagaggacccgcgttctggacagcgtccccgaccggctggccgacgcctac
aaggatgctgccgtctccatctccatcaccacggtgaccgacgctctggctctcttcctg
ggctacagctcgcccttcggctcagtgcggtccttctgcctgtactctggggtttctatt
tgcttctgctatctgtacagcatcacattcctgggggcgtgtctggctttgaatggacag
agagaggcagagaacaagcactggttcacctgtgccaaaatcccagaagatgtaccatgt
cgaggttcaaaagccttccgcgtgtgctgtgttggggggaactacgatagggtcactgag
aaagaggaaactgagcccctgagtttcatgttcgagcgcttctatggcccatttctgacc
cacaagtgcataaaagcttgtgtttttgtcttttacgcaggctatttagctgttagtgtc
tacggttgttttattttaaaggaaggattcgacattgggaatctggctttggatgattcc
tacatcgtcgaatactacaacaatcaaaggcaacacttctctgaatatcgctataacttg
atggtagcagtgaagcatcccctgcggtactgggatgaagatgaacagaagcttttgcgt
tcatgcatttcaagttttgagagtttaaactttgtgaatgggacttttggttggtttctt
tcctttctacaatatgcaaatgcaaccaatctcaatataggttctcaagaggctttccga
acacatctgctacatttcttagaccgtaattccatgttcaaacaagacatcaacttcact
gcagactataagattcaggcttctcgcttttttgttcagacgctgagcaacacaacaacg
aaggacttgatgattggactgagaaaagcagcagaggaaagtccagtagagctcctggtg
taccaccctgctttcatctactttgaccagtacaccgtcatcatggacaacaccattcaa
actatcctggtggccgtgattgtgatgctggtcgtctcgcttctcctgatacccagtcct
ctgtgttccctgtgggtggcttttgccatgtgctcagtcctggttggtgtgacaggcttc
atggcgctgtggggcgtaaacctggactgcatctccatgatccacctggtcatgtgcatt
ggcttttctgtggacttctcagcacatatttcttactcttttgtctccagctccaagatt
gatgccaatgagaaagcgattgatgctttggctcatttaggctatccaatcctgcaagga
gcattgtccactattttaggggtggtggtgctgtccatgtctgggagttacatctttagg
acgttcttcaagattgtgtttcttgtgatttcatttgggctgctccacggcttagtgttc
attccagtgtttctgaccctggttgggtcccgtggggcgtggtgttaa
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