Pseudoliparis swirei (Mariana hadal snailfish): 130198623
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Entry
130198623 CDS
T09868
Name
(RefSeq) dynein intermediate chain 3, ciliary-like
KO
K11143
dynein axonemal intermediate chain 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130198623
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130198623
04812 Cytoskeleton proteins [BR:
pswi04812
]
130198623
Cilium and associated proteins [BR:
pswi03037
]
Motile cilia and associated proteins
Dynein arm
130198623
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
130198623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_SPT8
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
130198623
NCBI-ProteinID:
XP_056277829
LinkDB
All DBs
Position
1:complement(22457532..22481143)
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AA seq
556 aa
AA seq
DB search
MEIVHVYTKLRLQFGRQCLFSDRPAELLVDVPTDQNLAPQFIQKTHRDQGLQACRDMSEH
QCSSGCRDPNQVKRTVTGLSWHPDGGRKLAAAYSCLEFQKASKDMNLDSYVWDVENPNRP
EMTLKPASPLVCLEYNPKDCHTLVGGSYNGQIAYWDTRKGSQPVETSSVEHSHRDPVYKI
IWLQSKTGTDIFSASTDGQVLWWDVRKLTEPTSCPRVSQPTKFLVGTEQGVVVSCNRKAK
TPAEKIVCTYDGHQGPVYALQRNPFFPKNFLTVGDWTARIWSEDIKDSHVSTLPPVRYQT
SYLMDACWSPVRPSVFFTVKMDGMLDVWDILFKQNDPTLSLKVCDEALYSLRLQDNGRLL
ACGSQQGGVSLLEVCPGLSTLQKNEKSLLAAMFERETKREKILEARQREIRLKERSRSEQ
SRDEDGGRDDGDQSPHQLIARAEDHFYVVTETEMKRRREKVDQTAESVGQSQGQGQSQSQ
SQGQGQSQGQSQDQGQGQSQGQSQGQSQSQGQSQDQGQGQSQSQGQSQDQGQSQSQSQGQ
DQGQSQGQSQDHSSEY
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgtccatgtctacacgaagctccgcctccagtttggccgtcagtgtctcttc
tccgaccgccctgcagagctgctggttgacgttcctacagaccagaatctggctccacag
tttatccagaaaacccaccgagaccagggcctgcaggcctgccgggacatgtcggagcac
cagtgttcctctggctgcagagacccgaaccaggtgaagcggaccgtcaccggtctgtcg
tggcatcctgacggcggcaggaagctggcggccgcctactcttgcctcgagttccagaaa
gcctccaaagacatgaacctggactcctacgtctgggacgtcgagaacccgaacagaccg
gagatgactctgaagccggcgtctccgctcgtctgtctggaatacaaccccaaagactgc
cacacgctggtgggaggcagctacaacggacagattgcgtactgggacactcggaaaggc
agccagccggtggagacgtcctctgtggagcacagtcacagagacccggtctacaagatc
atctggctgcagtccaagactgggacagacatcttctctgcatctactgatggacaggtt
ctgtggtgggacgtccgcaagttgaccgagcccacgtcgtgtccacgtgtctctcagccc
actaagttcctggtgggaacggaacagggcgtggtggtgtcctgcaacaggaaggcaaag
actccggcagagaagattgtctgtacgtacgatggccaccagggacccgtctacgctctg
cagaggaaccccttcttccccaagaacttcctcaccgtgggggactggaccgcccgcatc
tggtctgaggacatcaaggactcccatgtgtctacgttacctcctgtcagatatcagacg
tcctatctgatggacgcctgctggagtcctgtccgtccctctgtcttcttcactgtgaag
atggacggcatgttggacgtctgggacatcttgttcaagcagaacgaccccacgctgagt
ctcaaggtctgtgacgaggccctgtacagcctccggctgcaggacaacgggcggctgctg
gcgtgcggctctcagcagggcggagtctcgctgctggaggtctgtcccggactgtccacc
ctccagaagaacgagaagagcctgctggctgcgatgtttgagcgagagaccaagagagaa
aagatcctggaggcccggcagagagagatccgtctcaaggagaggagccgctccgagcaa
agccgggacgaggacgggggacgggatgacggagaccagagtccacaccagctgatagcc
agagccgaggaccacttctacgtcgtcacggagacggagatgaagaggaggagggagaag
gtggaccagacagccgaatcagtgggccagagccagggccaaggtcaaagtcagagccag
agccagggccaaggtcagagccagggtcagagccaggaccagggccaaggtcagagccag
ggtcagagccagggtcaaagtcagagccagggtcagagccaggaccagggccaaggtcaa
agtcagagccagggtcagagccaggaccaaggtcaaagtcagagccagagccaaggtcag
gaccagggtcagagccagggtcagagccaggaccattcttctgagtactga
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