Pseudoliparis swirei (Mariana hadal snailfish): 130198630
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Entry
130198630 CDS
T09868
Symbol
lrp12
Name
(RefSeq) low-density lipoprotein receptor-related protein 12
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130198630 (lrp12)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
130198630 (lrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
130198630
NCBI-ProteinID:
XP_056277840
LinkDB
All DBs
Position
1:complement(22487558..22522266)
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AA seq
725 aa
AA seq
DB search
MDYNLYGKGKGFRLSYITGKAEVSSCDVDQFHCSNGKCVPDRWRCNSMDECGDNSDEDLC
AESPFSFQPCSLNQFPCLSRYTRIYTCLPHSLRCDGSIDCQDLGDEIDCDVPTCGEWLRN
FYGSFSSPNYPDFYPPGSNCTWLINTGDHRKVVLRFTDFKLDGTGYGDYVKVYDGLEENP
RRLLRVLTAFDSRAPVAVVSSSGQLRVHFYADKVNAARGFNVTYQVDGFCLPWEVPCGGN
WGCYTEQQRCDGYWHCPNGRDELNCSTCQEEEFPCSRNGACYPRSDRCNYQNRCPNGSDE
KNCFFCQPGNFHCKNNRCVFESWVCDAQDDCGDGSDEESCPVIVPTRVITAAVIGSLICG
LLLVIALGCTCKLYSLRMFERRSFETQLSRVEAELLRREAPPSYGQLIAQGLIPPVEDFP
VCSGSQASVLENLRLAVRSQLGFTSLRLPSSGHRSSLWHRLFPFSRSRRSGSLALVSADL
EDGTVSSDLPSPDSDDPDAEGERGLGAAGGPVAPLPQKTPPSAAVEAVVFVTTSVTPTPT
CRQGLDRLRENPAASSPAPVVTPSPDPESHSYASEFRAPPTSALQRLAQNLHRLARNLTR
TSLNWQDQNWTNHSPLHHLETGIGGSEAGEQRDNGEEEEEDVELLIPASDFDSSSPPVPD
IRQTLLERYPASTTGHAPRHNRGNGGGRDGPCEHCGMVHTARIPDACLEATSKTESSDDE
LLLLC
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggactacaacctctatgggaaagggaaaggcttccggctgtcctacatcactggtaaa
gcagaggtctccagctgtgacgtggaccagttccactgctccaacgggaagtgcgtccca
gatcggtggcgctgtaactccatggacgagtgtggagacaactctgacgaggatctgtgc
gccgagtctcccttctccttccagccctgcagtctgaaccagttcccctgcctgtcccgc
tacacccggatctacacctgtctgccccacagcctgaggtgtgacggcagcatcgactgc
caggacctcggggatgaaatcgactgtgacgttcccacttgtggagagtggttgaggaac
ttctacggctccttcagctctccaaactaccccgacttttaccctccaggaagtaactgc
acgtggctgatcaacacgggagaccacaggaaggtggtcctgaggtttactgacttcaaa
ctggacgggacgggttacggcgactacgtcaaggtgtacgacggcctggaggagaaccct
cgccgcctcctcagggtgctgaccgccttcgactccagagcgccggtcgctgtggtttca
tcctccggtcagctgcgagttcacttctacgccgacaaggtcaacgcggccagaggcttc
aacgtcacctaccaggtggacgggttctgccttccgtgggaggtcccttgtggcggtaac
tggggctgttacacggagcagcagcgctgtgacgggtactggcattgccccaacggccgg
gatgagctcaactgttccacgtgtcaggaggaggagtttccctgttccagaaacggcgcc
tgttacccccgatcggaccgctgcaactatcagaaccgctgccccaacggttctgacgag
aagaactgcttcttctgccagcccggaaacttccactgcaagaacaaccgctgcgtgttt
gagtcgtgggtgtgcgacgctcaggacgactgcggcgacggcagcgacgaggagagctgt
cccgtcatcgttcccacgcgggtcatcaccgccgccgtcatcggcagcctcatctgtggc
ctcctattggtcatcgccctcggctgcacctgcaagctctactcgctgcgcatgtttgaa
cgcaggtcatttgagacccagctgtccagagtggaagcagagttgcttcggagggaagcc
ccgccctcctatggtcagctgatcgcccagggtctgatcccgccggtggaggacttccca
gtgtgctctgggagccaggcctccgtcctggagaacctccgcctggctgtgcgctctcag
ctcggcttcacctccctgagactgccttcctctggccatcgcagcagcctgtggcaccgc
ctcttccccttctcgcggtcacggcggtccggttctttggcgctggtctctgctgacctg
gaggacggcaccgtgagctcagacctgccgtctccggactcggacgatccggacgcagag
ggcgagcgaggcttgggcgcggcgggcgggccggtcgcgccccttccccaaaagacacct
ccctccgccgcggtggaagccgtcgtgtttgtgacgacttccgtgaccccgacgcccacc
tgtaggcaaggtcttgatcggctcagagagaacccggccgcatcaagccccgcccccgtg
gtaactcccagtccagatcctgaaagtcacagctatgcctcagagttccgagctccgccc
acctctgccctgcagcgactggcccagaacttgcaccgcctcgccaggaacttgaccaga
accagcctgaactggcaggaccagaactggaccaatcacagtccacttcaccacctggag
acgggtatcggtgggtcggaggccggagagcagcgagacaacggagaagaagaagaagaa
gacgtggagctcctgatcccagcctccgatttcgactcctcctccccgccggtccccgac
atccggcagacgctgctagaacggtaccctgcttctaccacaggccacgccccccgccac
aatcgcggaaacgggggagggcgggacggcccctgtgaacactgtgggatggtccacacg
gctcggatccccgacgcctgcctggaggccacgagcaaaacggagagcagcgacgacgag
ctgctgctgctgtgctaa
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