Pseudoliparis swirei (Mariana hadal snailfish): 130198817
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Entry
130198817 CDS
T09868
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130198817 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130198817 (clasp2)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
130198817 (clasp2)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
130198817 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
RTP1_C1
MMS19_C
HEAT_DAAF5
ParcG
Motif
Other DBs
NCBI-GeneID:
130198817
NCBI-ProteinID:
XP_056277906
LinkDB
All DBs
Position
1:10336063..10389069
Genome browser
AA seq
1537 aa
AA seq
DB search
MEDHDTMDYFYQQVVQKDVTRRLQVGQELIDYLNDPSRSPDVEQDKPRLDKTMDELTGWV
NSSNFKVALVGIDICGAFVDRLGERFRGYLATVLPALVDRLGDGKDQVRENSQAVILRCM
EQSASPMYVWERLLPGFKHKNFRSREGICLCLSATLTTYGAQPLSLSKLVPHLCSLTGDQ
NPQVREASIATLVDVYRHVGEKVRADLGRRGLSAARLQALFTRFDEALNSGNMALSPGHD
RSFEDDDSVDGNRSSAAQAAFKVPKVPKKPAESSSARRPSATGGKLVSKESAGGVDEEDF
IRAFTDVPTVQIYSSRDLEDNLNKIREICSDEKHDWDQRANAMKKVRSLLVAGATNYDCF
YQHLRLLDGAFKLSAKDLRSQVVREACITVAYLSSVLGNKFDHGAEAIVPVLFNLIPNCA
KVMATSGMLAIRIIIRHTHVPRLIPLITSNCTCKSVAVRRRCFDFLELLLQEWQTHSLER
HTAVLVESIKKGLRDADSEARVEARKAYWGLRNHFPAETDALYNSLEPSYQKILQSCLKS
SGSVASLPQSDRSSSSSQESLNRPLTSKWTATPGRVPAGSTGGLPSASLQRSRSDVDVNA
AAVAKHRHVGQTRVTGRLPPGGYSSLDDASDQTDGTRSDNGRVRTKQPLSTASSVSSQVD
SRGRSRTKMVSQSQRSDESDCTPGSQSATPVGAGSRSGSPGRVLTSTALSTMNSGAHRVL
AGSSGDKTRRSRIPRSQGCSRDSSPTRLSVAPSSISSIYNGASRGARGSRIPRPSMSQGC
SREASRESSRDTSPVRSFTPLASRSYSRSTGALHTPDTFGAAGGSSFGISQSSHLSSSVS
AMRVLNTGSDVEEALADALLLGDMQSKKKPARRRYENSSMYSDDDANSDASSACSERSYS
SRNGGAIPTYMRQTEDVAEVLNRCASANWSERKEGLLGLQALLKNERILSRVELKRLCEI
FTRMFADPHSKVFSMFLETLVDFIHVHKEDLQDWLFVLLTQLLKKMGADLLGSVQAKVQR
ALDVTRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILKYIDTLTLQMEAPDFVNSSETR
LAISRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLAALPKTFQDGATKLLQNHL
KNTGNAAQAPMGSPLTRHTPRSPASWSSPVTSPTNTSQNTPSPSAFDYDTENMNSEDIYS
SLKGVTEAIQNFSVRSQEDMNEPVHRREGEEGDSGTDGRVSDFVEGGRMALDNKTSLLNT
PLLSSSPRGAREHFSDSPFKHSRKDTSMDDSEHPTDDSSLDQSELVAELLKELSNHNERI
EERKTALRDLLKLIRENTLQVWDEHFKTILLLLLETMGDREHVIRTLALRVLREILSKQP
WRFKNYAELTIMKALEAHKDPHKEVVRAAEETAAMLALSISPDQCVKVLCPIIQSADYPI
NLAAIKMQTKVVERVPREGLMSLLPEIVPGLIQGYDNSESSVRKASVFCLVAIYAVIGED
LKPHLNQLSGSKLKLLNLYIKRAQSGSSGSEPPSEGL
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcatgacaccatggactatttttaccagcaggtagtgcagaaagatgttacc
cgtaggttgcaggtcggccaggagctcattgactacctcaatgacccgagccgctccccg
gacgtggagcaggacaaaccccgcctggataagaccatggatgagctgacgggatgggtg
aactccagcaatttcaaggtggctttggtggggatagacatctgcggtgcgtttgtggac
cgcctgggagagcgtttcagaggatacctggccacagttttgccagctttggtggacagg
ctgggcgatgggaaggaccaggtcagggagaacagccaagctgtcatccttcgctgtatg
gagcagagtgcctcgcccatgtacgtttgggaaaggctacttcctggttttaaacataag
aacttccgcagtcgagaaggaatctgcctctgtctcagtgccacgctcaccacgtacgga
gcccagccactgagcctcagtaagctagttcctcatctctgctctctgaccggagaccag
aacccacaggtacgtgaggcctccatagcaacattggtggatgtttatcgtcacgttgga
gagaaggtccgagcagacctgggcaggagaggtctgtcggctgcacggttacaggcgtta
ttcactcgttttgatgaagccttgaattcaggcaacatggctctcagcccgggtcacgat
cgtagttttgaagatgatgacagtgtggatgggaatcgttcttctgccgcccaggctgcc
ttcaaggtcccaaaagttcccaagaagcctgcagagtcctcttctgcacgcaggcccagc
gctaccggtggcaagcttgtgtccaaggaaagtgcagggggagttgatgaagaggacttc
attcgagctttcacagatgtgcccactgtccagatttactcatcgagggatcttgaagac
aacctgaataagatccgggagatctgctctgatgaaaaacatgactgggaccagagagcc
aacgctatgaagaaggtccgctcactgctggtggcaggcgcgacgaattacgactgtttc
taccagcatctccggctactggacggagccttcaaactgtccgctaaagacctgcgctca
caagttgtccgagaggcctgcatcactgtggcctacctttcatcagtgctggggaataaa
tttgaccatggagcggaagctattgttcccgttctgttcaacctcatccccaactgtgcc
aaagtcatggccacctccggtatgttggctattcgcatcatcatacggcacacccacgtc
ccccggctcatccccctgatcaccagcaactgcacatgcaagtctgtggctgtccgaagg
cgctgttttgatttcctggaacttctgctccaggaatggcaaacccactctctggagagg
cacacggcagttctggttgagagcatcaagaagggacttcgagatgcagactcggaggct
agagtagaggctcgcaaggcctactggggtctgaggaaccactttccagcggagaccgac
gctctctacaactccctggagccatcgtaccagaagatccttcagtcctgcttgaagagc
tctggcagcgtggcctctcttccccagagtgaccgctcctcgtcctcctctcaagagagc
ctcaatcggcctctgacttctaaatggacagcaactccaggccgagtccctgcgggttca
acgggtgggttgccgtcggcctccctgcagcgatcccgtagtgacgtggatgttaatgca
gccgcagtcgctaagcaccgacacgtcggccagaccagggtaacggggcgcctgccccct
ggcggctactcctcactggatgatgcctctgatcaaacggatgggaccaggtcagacaat
ggccgtgtacgtaccaagcagcccttgtccactgccagcagcgtgtccagccaggtggac
tcaagaggacgcagccgcactaagatggtctcccagtcccaacgttccgacgaatccgat
tgcacaccaggatctcagtctgctacccctgttggtgctggcagtcgcagtggctctccg
ggtcgtgtgctgacgagtacggccctgagcaccatgaactcaggggcccaccgggtgctg
gcggggtccagcggggacaaaaccagacgcagccgtatcccccgtagccagggctgctcc
agagactcttcccccacccgcctgtcagttgctccttccagtattagttccatctacaac
ggagcaagcagaggagctcggggcagtcgtatccctcggcccagtatgagtcagggctgc
agcagagaggccagcagggagagcagccgcgacacgagccctgttcgctccttcactccc
cttgcatcacgaagctactctcgctccaccggagctctccacacacctgacacttttggg
gctgcaggaggatcaagttttggcatcagccagtccagtcatctctcttcttcagtcagc
gccatgagggtcctcaacacgggctcagatgtagaagaggctctcgccgatgctctgctg
ttgggagacatgcagtccaagaagaagccagcacggcggcgatacgaaaactccagcatg
tactctgacgatgacgccaacagcgacgcatccagcgcctgttcggagaggtcttacagc
tccaggaacggaggagccatccccacctacatgaggcagacagaagacgtagctgaggtg
ctgaaccgctgtgccagtgccaactggtcagagaggaaggaagggcttttgggtctccag
gcgctgctgaagaacgaacgcatcctcagtcgggtggagctaaagcggctctgtgaaatc
ttcacccggatgtttgcagaccctcacagtaaggtgttcagtatgttcctggagacgctg
gtagatttcatccacgtccataaggaagatctgcaggactggttgttcgtcctgctcaca
cagctgctgaagaagatgggagctgacctgctgggctccgtacaggccaaagttcagaga
gccctggatgtcacacgggagtcttttcccaatgaccttcagtttactattctcatgagg
tttactgtggaccagacacagacacccaacctcaaggtgaaggtggccattttgaagtat
atcgacaccctgacgttacagatggaagctccagactttgtgaactccagtgagactcgg
ctcgccatctcccgcatcatcacctggacgactgaacccaagagctctgacgtcagaaag
gcggcccagtcggtgttaatctcactgttccagctcaacactccagagttcactatgctg
ctggcagctctgcccaaaaccttccaggacggagccaccaagctgcttcaaaaccatctg
aagaacactggcaacgctgcacaggcaccaatgggcagccctctgacgcgccacaccccc
cgatctccagcaagctggtccagcccggtcacttcccccaccaacacttcccagaacacc
ccctcaccaagtgcatttgactacgacacggagaacatgaactcagaggacatctacagc
tcactgaaaggtgtcactgaggcgatccagaactttagcgtccgcagccaggaggacatg
aatgaaccggtccaccggcgggagggagaggagggggacagcgggacagacggcagagtg
tcagactttgtggaaggaggccgcatggctctggacaacaagacgtccctcctcaacacc
cccctgctttcctccagcccccgaggggcccgcgagcacttctcagactctcccttcaaa
cacagccgcaaagacaccagcatggacgactctgagcatcccactgatgacagcagcctc
gaccaatcggagctggtggccgagctgctgaaagagctgtccaatcacaacgagcgcatt
gaggagaggaagacagcgctgcgcgacctgctgaagctgattcgcgagaacaccctgcag
gtgtgggacgaacatttcaagaccatcctgctgctgctgctggaaacgatgggcgacaga
gagcatgtgatccgaacgctagctctgcgggtgctgagagagattctcagcaagcagcca
tggaggttcaaaaactacgcagagctcaccatcatgaaggccctggaggctcacaaagac
cctcacaaggaggtggtacgagcagcagaggagacggcagccatgttggccttgtccatc
agtcccgaccagtgtgtcaaggtgttgtgtcccattatccagtcagccgactaccccatc
aacctggctgccatcaagatgcagaccaaagtagtggagagggttccccgcgagggcctg
atgagcctcttgcctgagatagtgccaggactcatacagggttacgacaactctgagagc
agtgtaaggaaagccagtgtgttctgcttggtggccatttatgcagtgatcggagaggac
ctcaaaccgcacctcaaccaactctccggcagcaagctgaagctgttgaatctgtacatc
aagcgcgcccagtctggctcgagcggcagtgaacctccgtctgagggcctatag
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integrated database retrieval system
