Pseudoliparis swirei (Mariana hadal snailfish): 130198886
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Entry
130198886 CDS
T09868
Symbol
pard6b
Name
(RefSeq) partitioning defective 6 homolog beta
KO
K06093
partitioning defective protein 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
pswi04517
IgSF CAM signaling
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130198886 (pard6b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130198886 (pard6b)
09144 Cellular community - eukaryotes
04530 Tight junction
130198886 (pard6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130198886 (pard6b)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
130198886 (pard6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
130198886
NCBI-ProteinID:
XP_056277941
LinkDB
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Position
9:complement(1485867..1501532)
Genome browser
AA seq
399 aa
AA seq
DB search
MNKTHRVPSNRSLSAVEVKSKFGAEFRRFSLDRSKPGRFDEFYGLLQHVHRIPNVELLVG
YADVHGDLLPINNDDNYHKAISTASPLLRLFLQRKEEADYTFGTNSLTRKKNGVLAAVLL
RPDAGRKKPPVLISLPRDFRPVSSIIDVDILPETHRRVRLYKHGQEKPLGFYIRDGSSVR
VTPQGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKSLDQVTDMMIANSH
NLIITVKPANQRNNVVRTGGGTASGSSGRSSDSGASYYGYSSHAGGAASSSSAPAHIIQN
FPAGELESDEDDEDLVIEVGGEAEPVGRRAPPAAYGVPSLPRYEPHLNLRAAAVDANGLL
PASGSSGSLGDAGATSTTPSPDRAARRRSLEEDGTVITL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacccaccgggtgccgagcaaccgttcactcagtgcggtggaggtgaagagc
aagttcggtgcagagtttcgtcggttctcgctggatcggtcgaagccgggccgcttcgat
gagttctacggcctcctgcagcacgtgcaccgcatccccaacgtggagctgctggtgggc
tacgccgacgtccacggagacctgctgcccatcaacaatgacgacaactaccacaaggcc
atctccaccgccagccccctgctccggctgttcctgcagaggaaagaggaagccgactac
acgttcggcaccaactctctgaccaggaagaagaacggcgtgctggcggcggtgctcctg
cggcccgacgccggcaggaagaagcccccggtgctcatcagcctgccgagggacttccgg
cccgtgtcctccatcatcgacgtggacatcctgccggagacgcaccgccgcgtccggctc
tacaagcacggccaggagaagccgctgggcttctacatccgcgacggctccagcgtgcgc
gtcacgccgcagggcctggagaaggtgccgggcatcttcatatctcggatggtgcctgga
gggttggcggagagcaccgggctgctggcggtcaacgatgaggtgctggaggtgaacggc
atcgaggtggcgggcaagtctctggaccaggtgacggacatgatgatcgccaacagccac
aacctcatcatcaccgtgaagccggccaaccagcggaacaatgtcgtccgcaccggcggc
ggcacggcgtccggcagctcgggccgctcgtccgacagcggcgccagctactacggctac
tcgtcgcacgccggcggcgccgcctcgtcgtcgtccgcgccggcgcacatcatccagaac
ttccccgccggggagctggagagcgacgaggacgacgaggacttggtgatcgaggtgggc
ggcgaggcggagcccgtcgggcgccgcgccccgccggccgcctacggcgtgccctcgctg
ccgcgctacgagccgcacctcaacctgcgcgccgccgccgtcgacgccaacgggctgctg
cctgccagcggcagcagcggatcgctcggcgacgccggcgccacttcgaccacaccgtcc
ccggacagggcggcgaggaggcggagcctggaggaggacggcaccgtcatcactctgtag
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