Pseudoliparis swirei (Mariana hadal snailfish): 130198915
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Entry
130198915 CDS
T09868
Symbol
snai1b
Name
(RefSeq) LOW QUALITY PROTEIN: snail family zinc finger 1b
KO
K05707
snail 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130198915 (snai1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130198915 (snai1b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
130198915 (snai1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-C2HE
zf-met
Zf-C2H2_ZNF451_6th
PARM
zf-C2H2_15
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
130198915
NCBI-ProteinID:
XP_056277996
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All DBs
Position
9:28660476..28677945
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AA seq
391 aa
AA seq
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MPRSFLVKKFSPGRKPLNRERALQSQAAYVPECFAQAVAPTHCPTTPLFWDAVAAPPPPA
PSPLGPLDLSGAPSSGEDEEDGGRTSDPPSPDAIPLYGSAGPPPPPAEAAAPPAFLCRHC
PKAYGSLGALKMHIRSHTLPCVCCTCGKAFSRPWLLRGHIRTHTGERPFSCQHCSRAFAD
RSNLRAHLQTHSEVKKYGCSCAXSRMSLHKHAALLPRLVAVIRPILKKPTLDPEVLANYR
PISNLAFLSKVLEKTSKTTETSKTTETSETSKTTETSKTTETSKTTETSETSKTTKTTET
SKTTETSETSKTTKTTETSKTTETSKTTETSKTTETSETSKTTKTTETSKTTETSKTTET
SKTTETSKTTETSKTTETSKTTETTGSGLDP
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctcgttcctcgtgaagaagttctcccccggccggaagccgctcaaccgggag
cgcgcgctgcagagccaggccgcttacgtcccagaatgctttgcgcaggccgtggccccg
acgcactgcccgaccactccgttgttctgggacgccgtggccgcccctcccccccccgcc
ccctcgccgctcggccctctggacctcagcggcgctccgtccagcggcgaggacgaggag
gacggcgggcgcacctccgacccgccgtccccggacgccatcccgctctacggctccgcc
ggcccgccgccgccgcccgccgaggccgccgcccccccggccttcctgtgccgacactgc
cccaaggcgtacggcagcctgggcgccctgaagatgcacatccgctctcacacgctgccc
tgcgtctgctgcacctgcgggaaggccttctccaggccctggctgctgaggggccacatc
cgcacacacacaggcgagcgtcccttctcctgccagcactgcagccgcgccttcgctgac
cgctccaacctgcgcgctcacctgcagacgcactccgaggtgaagaagtacggatgcagc
tgcgccnncagccgcatgtcgcttcataagcacgccgcgctgctgccccgcctcgttgct
gtcatccgtcccattctgaagaagcccaccctggacccggaggttctcgccaactacagg
cctatctccaaccttgccttcctgtccaaggtgttggagaagaccagcaagaccactgag
accagcaagaccactgagaccagtgagaccagtaagaccactgagaccagcaagaccact
gagaccagcaaaaccactgagaccagtgagaccagtaagaccactaagaccactgagacc
agcaagaccactgagaccagtgagaccagtaagaccactaagaccactgagaccagcaag
accactgagaccagcaagaccactgagaccagcaaaaccactgagaccagtgagaccagt
aagaccactaagaccactgagaccagcaagaccactgagaccagcaagaccactgagacc
agcaagaccaccgagaccagcaagaccactgagaccagcaagaccactgagaccagcaag
accactgagaccaccggcagcggcctcgacccctag
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