Pseudoliparis swirei (Mariana hadal snailfish): 130198949
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Entry
130198949 CDS
T09868
Symbol
rtel1
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of telomere elongation helicase 1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pswi03032
]
130198949 (rtel1)
Enzymes [BR:
pswi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
130198949 (rtel1)
DNA replication proteins [BR:
pswi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
130198949 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
Rhamno_transf
Motif
Other DBs
NCBI-GeneID:
130198949
NCBI-ProteinID:
XP_056278043
LinkDB
All DBs
Position
9:735235..762363
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AA seq
1170 aa
AA seq
DB search
MPSLTLRGVTVDFPYPPYDCQRDYMSKVLQCLQQKANGVLESPTGTGKTLCLLCATLAWR
DHFKDSISARKIAEKLGGGDMFPSTPVASWGTAATDGATATYYTDVPKIIYASRTHSQLA
QVINELKTTSYSPKVCVLGSRDQLCINPEVMRQENHHAKVHMCRGKVSTRSCVFYNNVEE
KSTDRDLGTSILDVEDLVKYGNKQRVCPYYLSRALKQQADIIFMPYNYLLDPKSRKAHSI
ELSGAVVIFDEAHNVEKTCEEATSFDLSPYDVASAVSAVDRLLLDQAREEVREEDFNMEG
LGSGLKINLESIATVKQILLDLEAAIDAFEVPSEKGLTKPGIFIYELLERVHLTYSSRTA
VSEALEQIIGHLAGQSGVFLNTSGLQKLLDIIQLVFCGDPSEKDRLQQMQTNTAHFKVHI
HRDKSYQKKPQSADVWASSSSKKQGNVLSYWCFSPGFSMQDLVAQGVRCLILTSGTLAPL
SSFTCEMRIPFSVSLENSHVIQRDQIFVGVIERGPDGVQLSSAFDRRFLPENMASLGNTV
ANLSRVVPEGLLVFFPSFPLMEKTLESWRSSGHAARIESVKPIFVEPKGNLKGTFNEVIE
GYYRQVNDPTARGGTFCAVCRGKASEGLDFADSFGRAVVITGLPFPPKMDPRVVLKMQYL
DEMSRRKEPGVKYLSGQDWYRQQAFRAVNQAIGRVIRHKDDYGAILLCDHRFQGSGARAQ
LPSWVQPYVRLYEGFGNVVRDVAQFFRVAQKMRPVVQKKAAAPSRGPVSSDLPSCSTTQN
ASGFPSCSGPQKAKKLDAHLPSLKRRRPDDPSGANGMARICIITSELRDXKRSANLLDAL
EQVEQEEEQEEEQEEGAEKAGHLSTLSLQWDKRMEEELRGGRRKIKLVQGQKGGGPEAVS
GGSSSSHKAKSFLVQMKSLSQVNFDRVMQALQAYKKTDRLDLLLTEAAVLTEDAHTHALL
RGLYQFIRPHHKSMFDERCQQLTGLGCGYRASHALPAASSSSASCSQLDTQQLNQGGPHL
NQQGPGDPQAASSSASCSQLDTQQLNQGGPHLNQQGPGDPQAGSAPGVHAFLADVRSAIG
AEKSSVLFRALQTFRRTDGYEALEATAVSLLTERDQDFTLLARFGRFIPARHRRRYQELL
GALTGADHQRPPVPSSLPFKTQSKIPFKKL
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgctgaccctgaggggcgtcacggtggacttcccgtaccccccctacgactgc
cagcgggactacatgagcaaggtgctgcagtgcctgcagcagaaggccaacggggtcctg
gagagccccacagggaccgggaagaccctgtgcctgctgtgtgccacgctggcctggcgg
gaccacttcaaggactccatctccgcccgcaagatagcggagaagctgggcgggggggac
atgttccccagcacccccgttgcatcctgggggacggctgccaccgacggggccacagca
acctactacacggatgtccctaagatcatctacgcctccaggactcactcccagctggcc
caggtcatcaatgagctgaagaccacctcgtacagccccaaggtctgcgtgctggggtcc
agagaccagctgtgcatcaacccggaagtgatgcgccaggagaaccaccacgccaaggtc
cacatgtgcagaggaaaggtctccaccaggtcctgtgtcttctacaacaacgtggaagag
aagagcactgaccgagacctggggacctccatcctggacgtggaggacctggtgaaatac
ggcaacaagcaaagggtctgtccctactacctgtcccgggccctgaagcagcaagcagac
atcatcttcatgccctacaactacctgctggatccaaagagccgtaaagctcacagcatc
gagctgagtggagccgtggtgatctttgacgaggcccacaacgtggagaagacgtgtgag
gaggccacgtccttcgacctcagtccctacgacgtggcctcggccgtcagcgccgtggac
cggctgctgctggaccaggcccgggaggaggtccgggaggaggacttcaacatggagggt
ctgggctcaggtctaaagataaacctggagagcatcgctacggtgaagcagattcttctg
gacctggaggcggccatcgatgccttcgaggtcccgagtgagaagggcctcacgaagccg
ggcatcttcatctacgagctgctggagagagtccacctgacctacagcagcaggacggcc
gtctccgaagctctggagcagatcatcggacacctggcgggacagtccggagtcttcctg
aacaccagtggcctgcagaagctgttggacatcatccagctggtgttctgcggcgacccc
tcggagaaggaccggctgcagcagatgcagaccaacacggctcatttcaaggttcacatc
caccgagacaaaagctaccagaagaaaccgcagagcgccgacgtgtgggcctcctcttca
tcgaagaaacaaggcaacgtcctgagctactggtgcttctctccgggcttcagcatgcag
gacctggtggctcaaggggtccgctgcctcatcctgaccagcgggaccctcgcccccctc
tcctccttcacctgtgagatgaggattccgttctcagtgagtctggagaacagtcatgtg
atccagagggaccagatcttcgttggcgtcattgagcgcggtccggacggcgtccagctg
agctcggcgtttgacaggaggttcctccctgagaacatggcgtcgctaggcaacactgtt
gccaacctgagccgggtggtccctgaaggcctcctggtgttcttcccttcgttccccctg
atggagaagaccctcgagtcctggaggtccagtggacatgcagctcgtatcgaaagcgtg
aagccgatctttgtggaacctaaaggaaacctgaagggcaccttcaacgaggtgattgag
ggttactacaggcaggtgaacgatcccacagccaggggcgggaccttctgcgctgtgtgc
cgaggcaaggccagcgaggggctggactttgcggactccttcggtcgggcggtggtcatc
accggcctgcccttcccccccaagatggacccgcgagtcgtcctgaagatgcagtacctg
gatgagatgagccggaggaaagagcccggagtgaagtacctctctggtcaggactggtac
cggcagcaggccttcagggccgtgaaccaggccatcgggagagtcatccggcacaaggac
gactacggagccatcctgctgtgtgaccacaggttccagggttctggggcccgggcccag
ctgccgtcctgggtccagccctacgtgcgcctgtacgaaggcttcgggaacgtggtccgg
gacgtggcccagttcttcagggtggctcagaagatgaggccggtggtgcagaagaaggcc
gcggctccgagccgagggccggtgagctcagacctcccgtcctgctccactacccagaat
gcatctggcttcccctcctgctccggcccccagaaggccaagaagctggacgcccacctg
cccagcctgaagaggaggagaccagatgacccctcgggagccaatgggatggccaggatc
tgcatcatcacgagtgagctcagagatnggaagagatcggccaacctcctggacgctctg
gagcaagtagagcaggaggaggagcaggaggaggagcaggaggagggagcagagaaggcc
ggccatctgtccacgttgtccctgcagtgggacaagaggatggaggaggagctgagggga
gggagacgcaagatcaagctggtccagggtcagaaggggggcggcccagaggccgtctct
ggaggatcctcctccagccacaaggccaagagcttcctggtccagatgaagtctctgagc
caggtgaacttcgaccgcgtcatgcaggccctgcaggcctacaagaagacggaccggctg
gacctgctgctcacggaggccgccgtcctcacggaggacgcccacacacacgcgctgctc
cgaggcctctaccagttcatccggcctcatcacaagagcatgtttgatgagcgctgccag
cagctgacggggctgggctgcggctaccgggccagccacgcactgcctgcggcctccagt
agctccgcctcctgcagccagctggacacacagcagctgaaccaagggggcccccacctg
aaccagcagggaccaggagaccctcaggccgccagtagctccgcctcctgcagccagctg
gacacacagcagctgaaccaagggggcccccacctgaaccagcagggaccaggagaccct
caggccggctcggcgcccggtgtccacgccttcctggccgacgtgaggagcgccatcgga
gcggagaagtcgtccgtcctgttccgggccctccagaccttcaggaggacggacggctac
gaggccctggaggcgaccgccgtgagcctgctgacggagagggaccaggacttcacgctg
ctcgcccggttcggccggttcatccccgcccgccacaggaggaggtaccaggagctgctg
ggcgctctgaccggtgctgaccaccagcggccaccagttccgtcgtcgctgcctttcaag
actcaaagcaagattcccttcaaaaagctgtag
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