Pseudoliparis swirei (Mariana hadal snailfish): 130198971
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Entry
130198971 CDS
T09868
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130198971 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130198971 (hnrnpa1b)
03041 Spliceosome [BR:
pswi03041
]
130198971 (hnrnpa1b)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130198971 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
130198971 (hnrnpa1b)
Spliceosome [BR:
pswi03041
]
Common components
Common spliceosomal components
hnRNP proteins
130198971 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_3
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
130198971
NCBI-ProteinID:
XP_056278081
LinkDB
All DBs
Position
9:14335435..14339309
Genome browser
AA seq
390 aa
AA seq
DB search
MSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPNTKRSRGFGFVT
YSSVDEVDAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHL
RDYFSQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTIHSHNCEVRKAL
TRQEMQTTGMGRSSSSSSSSGGGGRPYEYDRGFNQGSRGRYGDSPYNCNGGDGGGGGGGY
GGGGGGGPSGPGGYNNSGNRGYNQGYNQGGGGGGSGGGGGGGGGGYGGSAYESNGYGNCS
GGGSSGGGGGGGNNYNNMGHYDPQASNFGPMKNNFGGGGGGSGGVSRNFGGGGGSGGGGG
GSGGGGGSSGGSSSYGGGSNTGGYGRSGRF
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagatgtcccacgtgaaccggagcagcttcgcaagctgttcattggaggcttg
agcttcgagaccacagacgaaagcctgcgggctcattttgagcaatgggggagccttaca
gactgcgtggttatgagggatcccaacacaaagagatcaaggggctttggcttcgttaca
tactcttctgtggatgaagttgatgctgccatgtctgcccgcccccacaaggttgatgga
agagttgttgaacctaaacgagcagtttctcgggaggactccaaccggccaggggcccac
gtaacagtgaaaaagatatttgttggcggcatcaaggaagatacagaggagtcccacttg
cgagattacttctcacaatttggcaaaatagaggtcattgatatcatgactgaccgtaat
actggaaagaagaggggctttgcttttgtgacatttgatgatcatgactccgtcgacagg
attgtcatccaaaaataccacacaatccactctcacaactgtgaggtgaggaaggctctt
acaaggcaggaaatgcagactacaggaatgggacgcagcagcagcagcagcagcagcagc
ggtggtggtggaaggccttatgaatatgacagaggtttcaatcaaggaagcaggggtaga
tatggagacagtccttacaattgcaatggaggtgatggcggtggcgggggtggtggatat
ggcggcggtggtggtggtggtcccagcggtcctgggggatataacaatagtggcaaccga
ggatataaccaaggttacaaccagggaggaggaggcggtggcagcggtggtggaggagga
ggcggcggcggaggttatggaggaagtgcctatgaaagcaacggctatggtaactgtagt
ggaggtggaagcagcgggggcggcggcggaggaggaaataactacaacaacatgggccac
tatgacccccaagcctccaatttcggcccaatgaagaacaactttggtggtggtggcggc
ggcagcggtggagttagcaggaacttcggaggaggaggtggtagtggtggtggtggtggt
ggtagtggtggtggtggtggaagcagtggcggcagcagcagctatggagggggctcaaac
actggtggatatggccgttctggacgtttttga
DBGET
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