KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130198983
Entry
130198983         CDS       T09868                                 
Name
(RefSeq) tubulin alpha chain-like isoform X1
  KO
K07374  tubulin alpha
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04145  Phagosome
pswi04210  Apoptosis
pswi04517  IgSF CAM signaling
pswi04530  Tight junction
pswi04540  Gap junction
pswi04814  Motor proteins
pswi05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    130198983
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    130198983
  09143 Cell growth and death
   04210 Apoptosis
    130198983
  09144 Cellular community - eukaryotes
   04530 Tight junction
    130198983
   04540 Gap junction
    130198983
  09142 Cell motility
   04814 Motor proteins
    130198983
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    130198983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pswi03019]
    130198983
   03036 Chromosome and associated proteins [BR:pswi03036]
    130198983
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pswi04812]
    130198983
   04147 Exosome [BR:pswi04147]
    130198983
Messenger RNA biogenesis [BR:pswi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     130198983
Chromosome and associated proteins [BR:pswi03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     130198983
Cytoskeleton proteins [BR:pswi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    130198983
Exosome [BR:pswi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130198983
  Exosomal proteins of other body fluids (saliva and urine)
   130198983
  Exosomal proteins of colorectal cancer cells
   130198983
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 130198983
NCBI-ProteinID: XP_056278102
LinkDB
Position
9:complement(16214148..16219511)
AA seq 450 aa
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGLMPNGKTTGGKDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIELVLD
RTRKLAERCVGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCSFMVDNEAIYDICCRKLDVERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNSCFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNVAIANIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVGDEDEDDGQF
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctcggtgcacgtcggtcaggctggtgtccagattggcaatgcctgc
tgggagctttactgcctggaacacggcatccagccggacggactgatgcccaatggcaag
accacgggaggaaaagatgattccttcaacaccttcttcagtgagaccggagctgggaag
cacgtcccaagagccgtctttgtggacctggagcccacagtcatcgatgaggtgcgcagt
gggacttaccgccagctgttccaccctgagcagctgatcactggcaaggaggatgctgcc
aacaactacgcccgtgggcactacaccgtcggcaaagagatcattgagctggtgctggac
aggacccgcaaactggctgaaaggtgcgtcggccttcagggcttcctgattttccacagc
tttggcggtggcaccggctctggcttcacctctctgctgatggagcgtctgtctgtcgac
tacggcaagaagtccaagctggagttctccatctacccagctccccaggtgtccaccgct
gtggtggagccctacaacgccatcctgaccacccacaccaccctggagcactccgactgt
tccttcatggtcgataacgaggccatctacgatatctgctgtaggaaactcgatgtcgag
cgtccctcttacaccaacctgaacaggttgatcagtcagattgtgtcctccatcaccgct
tcccttcggttcgatggcgccctcaatgttgacctgacagagttccagaccaacttggtg
ccatatccccgtatccacttccctctggccacctatgcccccgtcatctccgctgagaag
gcgtaccacgagcagctaacggtgtctgaaatcaccaactcctgctttgagcccgccaat
cagatggtcaaatgtgaccctcgccacggtaaatacatggcctgctgccttttgtaccgt
ggtgatgtggtgcccaaagatgtgaatgttgccattgccaacatcaaaaccaagcgctcc
atccagtttgtggactggtgccccactggtttcaaggtgggcatcaactaccagccgccc
actgtagttcctggtggagacctggccaaggtccagagggccgtgtgcatgctgagcaac
accactgctatcgcagaggcctgggctcggcttgaccacaagtttgatctgatgtacgcc
aagcgtgcctttgtccactggtatgtgggggaaggtatggaggagggagagttctccgag
gccagagaggacatggcggcgctggagaaggattacgaggaggttggcgctgatagtgtg
ggagatgaggatgaagacgatggacagttttaa

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