Pseudoliparis swirei (Mariana hadal snailfish): 130199006
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Entry
130199006 CDS
T09868
Symbol
pym1
Name
(RefSeq) partner of Y14 and mago
KO
K14294
partner of Y14 and mago
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013
Nucleocytoplasmic transport
pswi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130199006 (pym1)
03015 mRNA surveillance pathway
130199006 (pym1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130199006 (pym1)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130199006 (pym1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
GvpG
AAA_23
EIF3I
Motif
Other DBs
NCBI-GeneID:
130199006
NCBI-ProteinID:
XP_056278133
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Position
9:complement(17111366..17114725)
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AA seq
209 aa
AA seq
DB search
MATLCVTDESDEAFSEFGKYISATQRPDGTWRKPRRVKDGYTPQEEVPVYENKFVKFFKS
KSDLPPGMNLSEGAPTKQQQEILCGDNEAAGLSKAAKRNMKRKEKRKHQPHEDVDSVSND
IENMSISQSDKSSNKTAVAVSVSSPNDYSAEADEKAKKIKNLKKKLRQVEELQQKMDSGE
ITEPTKDQLEKLLRVQALQDELQQLERDS
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctctgtgtcacagatgaatccgatgaggccttttctgaattcgggaaatac
atttctgctactcagcgacctgatggaacatggaggaagccgaggcgggtgaaggatggt
tatactccacaggaagaagtgccagtctatgaaaacaaatttgtgaagtttttcaagagc
aaatccgacctgccacctgggatgaatctgtctgagggggctccgacaaagcagcagcaa
gagattctctgcggggacaacgaggcggctggtctctcaaaggctgccaaacgcaacatg
aaacgtaaagaaaaacgaaaacatcaaccgcacgaggatgtggactcggtgagcaacgac
atcgagaatatgtctatttcacagagcgacaagtcttcaaacaagacggcggtggcggtt
tctgtctcgtctcccaatgattactcggcagaagcagacgaaaaggccaagaagataaaa
aacctgaaaaagaagctgcggcaagttgaagaattgcagcagaaaatggactcgggggaa
ataacagagccaacaaaggatcagttggaaaagctgcttcgggttcaggccttacaggat
gagttacagcagcttgagcgtgattcttga
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