Pseudoliparis swirei (Mariana hadal snailfish): 130199010
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Entry
130199010 CDS
T09868
Symbol
hnf4a
Name
(RefSeq) hepatocyte nuclear factor 4-alpha isoform X1
KO
K07292
hepatocyte nuclear factor 4-alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130199010 (hnf4a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pswi03310
]
130199010 (hnf4a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
130199010 (hnf4a)
Nuclear receptors [BR:
pswi03310
]
2. Hepatocyte nuclear factor 4 like
2A. Hepatocyte nuclear factor 4 receptor
130199010 (hnf4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
130199010
NCBI-ProteinID:
XP_056278139
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Position
9:complement(19496930..19515592)
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AA seq
454 aa
AA seq
DB search
MDMADYSEALDPAYTTLEFENMQMLPLGTDSSPTESANMNATGHLGVGSLCAICGDRATG
KHYGASSCDGCKGFFRRSVRKNHMYSCRFNRQCIVDKDKRNQCRYCRLKKCFRAGMKKEA
VQNERDRISTRRSSYEDSSLPSINALIQADVLSRQITSPAPILNSDIRTKKIAAITDVCE
SMKQQLLVLVEWAKYIPAFCDLPLDDQVALLRAHAGEHLLLGVAKRSMLYKDILLLGNDH
IIPRNCPELEVGRVAVRILDELVLPFQELQIDDNEYACLKAIVFFDPDSKGLSDPGKIKR
MRYQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMAKIDNLL
QEMLLGGSANEASHAPHSLHPHLVQEHLSSNVIVTSNIPTPIHNGQISTPETPIPSPPTA
SSSEHYKLTQGVIATVPKQPTSIPQPTITKQEAI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggacatggcagactacagcgaggctctggacccagcgtataccacactggagtttgaa
aacatgcaaatgctccccttgggcacagactcctcaccgactgagagcgccaacatgaat
gctaccggccacctcggggttggcagcctgtgtgccatatgtggagacagagccaccggc
aaacactacggggcctccagctgtgacggctgcaagggcttcttcagacgcagcgtccgc
aaaaaccacatgtactcgtgcaggttcaacagacaatgcattgtggacaaagacaagcga
aatcaatgcagatactgcagactgaagaaatgtttcagagccggcatgaagaaagaagcc
gtgcaaaatgaaagagacagaatcagcaccaggagatccagctatgaagacagcagttta
ccctcaatcaatgcactcatccaggcagacgtgctgtcaagacagatcacctcccctgct
cctatactgaacagcgacataaggactaaaaagatcgccgccatcacggatgtgtgtgag
tccatgaaacagcagttgctggtcttagtggagtgggccaagtacatcccagccttctgt
gacctgcccctggatgaccaggtggcgttgctgcgagcgcatgctggagagcacctcttg
cttggcgttgcaaagaggtcgatgctttacaaagacattctcttattaggaaatgaccac
atcattcccagaaactgcccagagttagaggttggcagggtggcggtgagaatcctggat
gaactggtgcttcccttccaggagcttcagatagacgacaatgaatatgcctgcttgaaa
gccatcgttttctttgacccagattctaaaggtctgagtgaccctggaaaaatcaagcgg
atgcgataccaggtccaggtcagcctggaagactacatcaacgataggcagtacgactcc
cggggacgcttcggggagctgctcctgctgctgccgacgctacagagcatcacctggcaa
atgatcgaacagatccagtttgtcaaactcttcggcatggccaagatcgacaacctgcta
caggaaatgcttctcggaggttctgccaatgaggcttcacacgcacctcactctctgcac
cctcacctggttcaagagcacctcagcagcaatgttatagtgaccagcaacatcccaacg
ccgatccataacggtcaaatctccactcctgaaaccccaatcccatctccacctactgcc
tccagctcagaacattataaactgactcagggggtcatagccaccgtgcccaagcagcca
acctccatccctcagcctactattacaaagcaagaggccatctaa
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