KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130199014
Entry
130199014         CDS       T09868                                 
Symbol
kdm5c
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pswi01009]
    130199014 (kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pswi03036]
    130199014 (kdm5c)
Enzymes [BR:pswi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     130199014 (kdm5c)
Protein phosphatases and associated proteins [BR:pswi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130199014 (kdm5c)
Chromosome and associated proteins [BR:pswi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130199014 (kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD PHD_4
Other DBs
NCBI-GeneID: 130199014
NCBI-ProteinID: XP_056278141
LinkDB
Position
9:20502642..20524071
AA seq 1568 aa
MEGEEFVPPPECPVFEPSWEEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFSVELDT
FRFTPRIQRLNELEAETRVKLNYLDRIARFWEVQSSSLKIPHIERRILDLFSLSRVVTDE
GGFEMVCKERRWARVAQRLGYPPGKNIGSLLRSHYERIVYPFEVFHSGVSLPHCKPKHYD
GEEVDKEYKPHSIPLRQSVHPSKTSSYGRRANRCQPDGPEDLAPHPLTTGSQLISAPEPT
EEDIEKNPELKKLQIYGAGPKMMGLGLVARYKGIRKKDELPQTVTIKASASPAPGDTSVK
AEPLEPQEKQSDGGTSSPQPPRPTIAVKTEVKKEEPEVEGGKKKEDDVTACTKMTMRLRR
NLNNPQSVDSFVCRMCGRGDDDEKLLLCDGCDDNYHTYCLLPPLTEPPKGNWRCPKCLAE
DCKKPSEAFGFEQATREYTLQSFGEMADAFKADYFNMPVHMVPTELVEREFWRLVSSIEE
DVVVEYGADIHSKDFGSGFPMNNGKKELTKEEEEYARSGWNLNVMPVLEQSLLCHINGDI
SGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSVAAERLEEVMKKLTP
ELFEFQPDLLHQLVTIMNPNILMSHGVPVVRTNQCAGEFVVTFPRAYHSGFNQGYNFAEA
VNFCTADWLPAGRSCIEHYRRLRRYCVFSHEELTCKMATSPEKLDLNLAAATHREMFIIV
QEERKLRKGLMERGITEAEREAFELLPDDERQCDLCKTTCFLSALACSNCPAKLVCLSHT
QDLCNCPTEKLYLRYRYTLDELLAMLHRLKVRSESFDSWANRVKEALEQEEGNKIGIDDL
KMLKLEAVEKKFPDNELLRKLNTVVKDIERCQQTSTELLSNSMTSESKMTLAELKSLVEK
MQNLPCVIAQLEEVQVVLRTVEDFQRQAQLLANDRDWRRDSSPPEQLQTLLEQGAQLLVV
VPECDLLQGLKEQSHWLAEVRRTLGTEGGERQEVMLDVLRNLMEAGCNVPQSVSVETAMA
ELQELLTIAERWEEKAQICLEQRQKHPLSTLEAIVNEAQLIPVKLPNILALQDCLTRARA
WVTDLEEIQNGEHYPCLDDLEGLVAIGRDLPVFMEELRQLELQVASAHSWRDKATKTFLK
KSSQHSLLEVLCPCAKRRERRGEMGPLEDTNTLGLSAHDLRDPAAIVLAFKEGEQQEKEA
LLRLRKLNMCKSGLNSSSCKENKENGRWEDAMETDTSSHSVDSIKENGAAPPQSVCVCTG
QPRAPQLRCHLCKDWFHGGCVPSPSLLPSSGPPSGNPLCWWDWDARFLCPRCQRSRRPRL
ETILALLVALQRLPVRLPEGEALQCLTERAITWQGRAKEAVETPELQRALQRLQVLRCDA
ETKETKGSAVIVLSDSEGGEAEEGVIDLTDENSPKKNPKESNGTQAGCENGISKKSVTGV
GSLLPLLPLLRGQVVALLPATKVQLEELQLEGDLLEVSLDQTLIIHRVLQAASAPQRETL
RTLIQIELEEQRRTSRGRAKDSKRKRKSHRGGSGDGAGERSLDPSESKKNCPLSPAPQLP
VQTNPEIL
NT seq 4707 nt   +upstreamnt  +downstreamnt
atggaaggggaagagtttgtacctcctccggagtgtccagtatttgaaccgtcatgggag
gagttccaggacccccttggctacattgccaagattcgtccaattgcagagaagtctgga
atctgcaaaatccgaccgccagcagactggcaaccaccgttttcagtggagctggatacc
ttccggttcacaccccgcatccagaggcttaatgagttggaggcggagaccagagtgaaa
cttaattatttggaccgcatcgccaggttttgggaagtccagtcatcctccttgaaaatc
ccacatattgaaaggcgcatccttgatcttttcagcctctcaagggttgtgacagatgaa
ggaggttttgagatggtctgtaaggaacggcgctgggctcgtgtggcccagagacttggc
tacccgccaggcaagaatattggttctctgctgcgctcgcactatgagaggatcgtctac
ccctttgaagtgttccattctggtgtcagcttgccgcattgcaagccaaagcactacgat
ggtgaggaagtggataaagagtacaagccacactccatccccctgcgacagtctgtgcat
ccctccaaaacaagcagttatggacgcagagcgaaccgctgccagcctgatggtccagag
gatctggccccccatcctctcaccactggctctcaactcatctctgcgcctgaacctaca
gaggaagacatagagaagaacccagaactgaagaagcttcagatctacggggcaggacca
aagatgatgggacttggacttgtggcaaggtacaaaggcatcaggaagaaagatgaactg
cctcaaaccgttaccatcaaggccagcgcgtctcctgctcccggtgatacctccgtcaaa
gcggagccactggagcctcaagagaagcagagtgacggcggtacgtccagcccccaaccg
ccgcgtccgaccatcgcagtaaagacggaagtgaagaaggaagaaccagaggtagaaggt
ggtaaaaaaaaggaggacgatgttacagcgtgcaccaaaatgaccatgaggcttcgtcgc
aacctcaacaacccgcagagtgtggattcttttgtgtgtcgaatgtgtggtcggggagat
gacgacgagaaactcttgctgtgtgatggctgcgacgacaactaccacacctactgtcta
ctgccccccctcacggagcctcccaaaggcaactggcgttgccctaaatgtctggcagag
gactgcaagaaaccttccgaagcgtttggctttgaacaggcgacacgagagtacactctg
cagagttttggggaaatggcagatgctttcaaagcggattacttcaacatgcctgtccac
atggttcccactgagctggtggagcgagagttctggaggttggttagtagtatcgaggaa
gacgtggttgttgagtacggagcggacatacactcgaaggattttggcagcggtttcccg
atgaacaatggcaagaaggagctcacaaaggaagaagaggaatacgcccgcagcggctgg
aacctgaatgtgatgcccgtgctggagcagtcgctcctgtgccacattaatggagacatc
tctgggatgaaggtgccgtggctttatgtcggcatggtgttctcggctttctgctggcac
attgaggatcactggagctactccatcaactacctgcactggggggaacccaagacgtgg
tatggggttccctctgtggcagctgagcgacttgaggaagtgatgaagaagctgacgcca
gagctgtttgagtttcaacctgacctcctgcaccagctggtcaccatcatgaaccccaat
atcctcatgtctcatggcgtaccggttgttcgtaccaaccagtgtgctggtgagtttgtc
gtcaccttccccagagcctaccacagcggcttcaatcagggatacaactttgccgaagct
gtcaacttctgcactgcagactggctgcctgctggccgttcctgtatcgagcactaccgg
cgtctgaggcggtattgtgtgttctcgcacgaagagctcacctgtaaaatggctaccagc
cccgagaagctagacctcaacctggctgcagctacacaccgagaaatgttcattattgtt
caggaggagaggaagctgcgaaagggtctgatggaaaggggcattactgaagcggagcgc
gaggcatttgagctgctgcctgacgatgagaggcagtgtgacctctgtaagaccacgtgc
ttcctctccgctctggcctgctcgaactgtcccgcgaagctggtgtgcctctcgcacact
caggatctgtgcaactgccccactgaaaaactctacctcagatacagatacacccttgat
gagctgttggccatgctgcatcgattaaaggttcggtccgagtcctttgattcctgggcc
aaccgagtgaaagaggcacttgagcaggaagaaggaaacaagataggaattgacgacctg
aagatgctgaagctggaagcggtggaaaaaaagtttcccgacaatgaactgctgcggaag
ctcaacactgttgttaaagacatagaacgctgccagcagaccagcacggagctcctcagt
aactcaatgaccagtgaaagtaagatgaccttggcagagctgaaatccttggtggagaag
atgcagaacctgccatgtgtgatcgcccagctggaggaagtgcaggtggttctgcggaca
gtggaggatttccaaaggcaggctcaattactggccaatgacagggactggaggagggac
tcctcgccacctgagcagttgcagactctgttggagcagggcgcccagctgctcgttgtg
gtgccggagtgtgatttactccagggcctcaaggagcagagccattggctcgcagaggtg
agacgcacccttggcacagaggggggagaaaggcaggaggtgatgttggacgttttgaga
aacctgatggaagcgggctgcaacgtaccccagagtgtttccgtggagacggccatggca
gagctccaggagctgctcacgattgccgagcgttgggaggagaaggcgcagatctgcctc
gagcagaggcaaaaacatcccctctcgactctggaggccatcgtgaacgaggcccagctg
atcccagtcaagctgcccaacattctcgctctccaggactgtctcactcgagcacgcgcc
tgggtcacagacctcgaggagatccagaacggggagcattacccctgcctggatgacctc
gagggcctggtggctattggaagagacttgcccgtcttcatggaggagttaaggcagctg
gagctgcaggtagccagcgctcattcctggagggacaaggccaccaagaccttcctgaag
aagagcagtcagcacagtctgctggaggttttatgtccgtgtgcaaaaaggagggagagg
cgaggtgagatggggcccctggaggataccaacactctgggcctctctgctcacgacctg
agggacccggccgctatagtgctggcgttcaaagaaggggagcagcaggaaaaggaggcg
ctgctgagattacggaaactgaacatgtgcaagtctggacttaactcctcaagttgcaag
gagaacaaggagaacgggcggtgggaggacgccatggagacggacacgtccagccactcg
gtggactctataaaggagaacggcgccgcccccccccagtccgtctgcgtgtgcaccggt
cagccccgcgcgcctcagctccgctgtcacctgtgcaaggactggttccacggcggctgc
gttccctccccctccctgctcccctcctccggcccgcccagcgggaaccccctctgctgg
tgggactgggacgcgcgcttcctgtgtccgcggtgccagcggtcccggcgcccgcgcctg
gagacgatcctggcgctgctcgtcgccctgcagcggctgccggtgcgcctgccggagggc
gaggcgctgcagtgcctcacggagcgggccatcacctggcagggccgggccaaggaggcg
gtggagacccccgagctgcagcgggccctccagaggctgcaggtactccggtgcgacgcg
gagaccaaggagaccaaagggagcgccgtgatcgttttgtccgactccgagggcggggag
gcggaggagggcgtcatcgacctgacggacgagaattcgcccaaaaagaaccccaaggaa
agcaacggcactcaggccggatgtgaaaatggcatcagcaagaagtctgttacaggcgtg
ggctctctgctgccgctgctgccgctgctccggggtcaggtggtggcgctgctgccggcc
accaaagtccagctggaggagctgcagctggaaggcgatctgctcgaggtgtccctggac
cagacgctcatcatccacagagttctgcaagctgcgtccgctccacaacgagaaacactg
cgcacactcatccagattgagctcgaagagcagaggcggacgagccgcgggcgagccaag
gactccaagcggaagagaaagagccaccgaggaggcagcggggacggggcaggagaacgg
tcactggacccctcggagtccaagaaaaactgtcccctcagccccgcccctcagttacct
gtccagaccaatccagagattttgtga

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