Pseudoliparis swirei (Mariana hadal snailfish): 130199093
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Entry
130199093 CDS
T09868
Name
(RefSeq) paired box protein Pax-7-like
KO
K09381
paired box protein 3/7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130199093
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130199093
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
Homeobox_KN
HTH_23
HTH_Tnp_IS1
DUF6033
Motif
Other DBs
NCBI-GeneID:
130199093
NCBI-ProteinID:
XP_056278287
LinkDB
All DBs
Position
9:1199757..1235099
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AA seq
493 aa
AA seq
DB search
MSSLPVLMRAAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAH
HGVRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRD
SPGMFSWEIRDKLLKDGVCDRSAAPSGEASSVSSISRVLRARLGKREEEEECDKKDEDGE
KKSKHSIDGILGDKGGRMDELSDVESEPDLPLKRKQRRSRTTFTAEQLEELENAFERTHY
PDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPTLP
TYQLPESSYPSNSLSQDGGGTVHRPQPLPPSSMHQNADGGSAYGLASNRHGFSSYSDSFN
NHVNPVSNGLSPQVMSILSNPGGVSSQPQLDFSPLHSALDSPPPNGAGCSQRAAEASIKT
VDSLPSPQSYCPSTYSTGGYSMDPAAGYQYSQYGQTAVDYLAKNGGLSSQRRMKLADHSA
VLGLLQVETGQAY
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccctcccggtcctgatgcgcgcggctcccggacagaactacccccgcaccggg
ttccctctggaagtgtccactcctctgggtcagggccgggtcaaccagctcgggggggtc
ttcatcaacggccggccgctgcccaaccacatccggcacaagatcgtggagatggcgcac
cacggggtccggccctgcgtcatctcccgccagctgcgcgtgtcccacggctgcgtctcc
aagatcctgtgccggtaccaggagaccgggtccatccggcccggggccatcggcggcagc
aagcccaggcaggtcgccacgccggacgtggagaagcggatcgaggagtacaagcgggac
agccccggcatgttcagctgggagatccgggacaagctgctgaaggacggggtgtgcgac
cggagcgcggcgccgtcaggtgaggcctcctccgtgagttccatcagccgcgtgctgcgg
gctcggttagggaagagggaggaagaggaggagtgtgacaagaaggatgaagacggagag
aagaagagcaaacacagcatcgacggcatcctgggcgacaaaggcggccggatggacgag
ctgtcggacgtggagtcggagcccgacctcccgctgaagaggaagcagcgccgcagccgg
acgacgttcacggcggagcagctggaggagctggagaacgccttcgagaggacgcactac
cccgacatctacacccgggaggagctggcccagaggaccaagctcaccgaggcccgggtc
caggtttggttcagtaaccgaagggccaggtggaggaaacaagcgggagccaatcagctg
gcggcgttcaaccacctgttgccgggcggattccctcccacggggatgccgacacttcct
acataccagctgccagagtccagctacccgtccaacagcctgtcccaagacggcggtggt
acggtccaccgcccccagccgctgcctccgtcctccatgcaccagaacgcagacggcggc
tccgcctacggcctggcctccaaccgccacggcttctccagctactcggactccttcaac
aaccacgtcaaccccgtcagcaacggactctccccccaggtgatgagcatcctcagtaac
cccggcggcgtctcctcacagcctcaactcgacttctcgccgctccacagtgccttggac
tcgcctccacccaacggcgccggctgcagccagcgggcggccgaggcctccatcaagacc
gtggacagccttccctcgccgcagtcctactgcccctccacctacagcaccggcggctac
agcatggacccggccgccggctaccagtacagccagtacggccagacggcggtggattac
ctggcgaagaacggcggcctgtccagtcagcgccggatgaagctggccgaccactcggct
gtactgggcctgctgcaggtggagacgggtcaggcctactag
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