Pseudoliparis swirei (Mariana hadal snailfish): 130199111
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Entry
130199111 CDS
T09868
Name
(RefSeq) tubulin alpha-1C chain-like
KO
K07374
tubulin alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04145
Phagosome
pswi04210
Apoptosis
pswi04517
IgSF CAM signaling
pswi04530
Tight junction
pswi04540
Gap junction
pswi04814
Motor proteins
pswi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130199111
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130199111
09143 Cell growth and death
04210 Apoptosis
130199111
09144 Cellular community - eukaryotes
04530 Tight junction
130199111
04540 Gap junction
130199111
09142 Cell motility
04814 Motor proteins
130199111
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130199111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130199111
03036 Chromosome and associated proteins [BR:
pswi03036
]
130199111
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130199111
04147 Exosome [BR:
pswi04147
]
130199111
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130199111
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
130199111
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
130199111
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130199111
Exosomal proteins of other body fluids (saliva and urine)
130199111
Exosomal proteins of colorectal cancer cells
130199111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
130199111
NCBI-ProteinID:
XP_056278305
LinkDB
All DBs
Position
9:complement(19607209..19609829)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSGKTSGGGDDSYNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEVIDIVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLDHSDCSFMVDNEAIFDICRRNLDVERPSYSNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKACHEQLTVAEITNSCFEPAN
QFVKCDPRHGKYMACCLLYRGDVVPKDVNAAIANIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVGDDEEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctccatccacgtcggtcaggccggggtccagattggcaatgcctgc
tgggagctttactgtctggaacatgggatccagccggatggacagatgcccagtggaaag
acctccggaggaggagacgattcctacaacaccttcttcagtgagactggagccggaaag
cacgtccccagagccgtgtttgtggatctggagcccactgtcattgatgaggtgcgcact
gggacttaccgccagctgttccaccctgagcagctgatcactggtaaggaggatgctgcc
aacaattacgcccgtggacactacaccatcggcaaggaagtcatcgacatcgtgctggac
aggatccgcaaactgtcggaccagtgcaccggccttcagggcttcctggttttccacagc
tttggcggtggcaccggctctggcttcacctctctgctgatggagcgtctgtctgtcgac
tacggcaagaagtccaagctggagttctccatctacccagctccccaggtgtccaccgct
gtggtggagccctacaacgccatcctgaccacccacaccaccctagatcactctgactgt
tccttcatggtcgataacgaggccatcttcgatatctgccggaggaacctcgatgttgag
cgtccctcttacagcaacctgaacaggttgatcagtcagattgtgtcctccatcaccgct
tcccttcggttcgatggcgccctcaatgttgatctgacagagttccagaccaacttggtg
ccatatccccgtatccacttccctctggccacctatgcccccgtcatctctgctgagaaa
gcttgccatgagcagttaacggtggccgaaatcaccaactcctgctttgaaccagccaat
caatttgtaaaatgtgacccccgccacggtaaatacatggcctgctgccttttgtatcgt
ggtgatgtggtgcccaaagatgtaaatgctgccattgccaacattaaaaccaagcgctcc
atccagtttgtggactggtgccccactggtttcaaggttggcatcaactaccagccgccc
actgtagttcctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcgacttgaccacaagtttgatctgatgtacgct
aagcgtgcctttgtccactggtatgtgggtgaaggtatggaggagggagagttctctgag
gccagagaggacatggcagctctggagaaggattacgaggaggttggagctgatagtgtc
ggagacgatgaggaagaaggagaagagtattaa
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