Pseudoliparis swirei (Mariana hadal snailfish): 130199127
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Entry
130199127 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: calcium-responsive transactivator-like
KO
K15623
protein SSXT
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130199127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130199127
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130199127
GBAF(ncBAF) complex
130199127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
130199127
NCBI-ProteinID:
XP_056278324
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Position
9:23707089..23714354
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AA seq
408 aa
AA seq
DB search
MSVAFSSARPRSKGEVTQQAIQQMLDENHHLIQCIMDHQSKGKTADCTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTPNMSVGPGGMGPSNLNDNMATGPPPSAMMQSQMSNGPGHA
PMQQHAAQVQSATPSASLSLQAGGYGSPASGYGHSAPSSQSTGPGYGSSSSSSYTPSSSS
SRSNLNMQSNQISMMQQQSATAHYSSAQVGGQHYQGQQAMGMMGQGGVTSQRPGGTYRSA
QQGRGRDFFGASVAFXQDGFYXGQYGLTQSSNQPINRQYYPDCHGEYSYQQYSYQQSSYG
EQGYDRSFDESSQHYYEGGNSQYSQQQAQYQQGSGEQPFSQQQFSYQQGYGGQPQGYGPG
QAGSSQYSQYQQCQSQQYGSYRSSQAGSGAQTQRPYAYEQGQYGNYQQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgttttcatcggcgcgccccaggagtaaaggggaggtgacgcagcaagcc
atccaacagatgctggatgagaatcaccacttaatacaatgtataatggatcaccaaagc
aaaggcaagacagccgattgtacacagtatcagcagatcctgcacagaaatcttgtgtac
ttggccacgatagcagattccaatcagaacatgcagtcactactacccgcacctcccact
cccaacatgtcggtgggtcctggagggatgggcccgagcaacctcaatgacaacatggca
accggaccacccccctcggcaatgatgcagagccaaatgagcaatggccccggccacgcc
cccatgcagcagcatgccgctcaggtgcagtcggccactccctccgcatccctcagcctg
caggccggcggctacggcagcccggcctccggctacggccactctgcgccttcctctcag
agcaccgggcctggctacggctcctcctcctcctcttcctacacaccctcctcttcctcc
tcccgcagcaacctcaacatgcaatccaaccaaatatccatgatgcagcaacagtccgcg
actgcacactactcctcagcccaggtcgggggtcaacactatcagggacagcaggccatg
ggcatgatgggtcagggcggcgtgacgtctcagagacccgggggaacctaccgctccgca
cagcaaggtagggggcgagacttcttcggggcaagcgtggcgttctaacaagacgggttc
tactgaggccagtatggactcactcagagctccaaccagcccataaaccggcaatattac
ccggattgtcacggggagtactcgtaccaacagtactcgtaccaacagtcttcgtacggg
gagcaaggctacgaccggtcctttgatgaatcttcacagcattactacgaaggaggtaac
tcccagtacagccagcagcaggcccagtatcagcagggatctggcgagcagcccttcagc
cagcagcagttctcctatcaacaaggctacggcgggcagccgcagggatacggtcctggc
caggctggatcctctcagtattctcagtaccagcagtgtcaaagccaacagtacgggtcc
taccgctcctcgcaggccggctctggagcgcagactcagaggccctacgcctacgaacag
ggtcagtatggaaactatcaacaataa
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