Pseudoliparis swirei (Mariana hadal snailfish): 130199150
Help
Entry
130199150 CDS
T09868
Symbol
sort1b
Name
(RefSeq) sortilin 1b
KO
K12388
sortilin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130199150 (sort1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
130199150
NCBI-ProteinID:
XP_056278378
LinkDB
All DBs
Position
9:12321358..12334699
Genome browser
AA seq
820 aa
AA seq
DB search
MMGLLLHSLLLLSLSTFTAGVDFQLESKPFAQSFLRHLNIEERAVSIIRRALPAWLSASP
NHKRTRRNAELGENCKALQGYDTKLADNTHRYNFNDLSGSVSLAWVGDGTGVILALTTFQ
VPFFMLRLGQSKLYRSENYGKSFEDVTNLINNTFIRSEFGIAIGSSGKVILTGEVSGGYG
SRVFVSNDFGKSFTPRDLPFIPLMQITYNPDNSNVLLALSNSNELWLSEDVGNNWKKIHD
MVCLVKWGRKDTIFFTANHNGSCSNRGMLELKRSTDLGKNIKTIAGKIYSFGQGGRFLFA
SVMTGKGTLRMIHVSVDQGETWNMAQLPPVGHEQFYSILAANDDMVFMHVDEPGDTGFGT
IYVSDDRGTVYSKSLERHLYTTTGGDTDFTNVTSLRGVFLTSVLAEDKSVHSVVSFDQGG
EWVPLRKPANSKCDATAKDPAKCSLHIHAAYSTAMRLNFPMLPLTETNAVGLILAHGSVG
DSISVMKPDVYVSDDGGYTWIKALIGPHHYAILDSGGLLVAVEHSTRPINTIKFSTDEGQ
CWGVYNFTKDPIYFTGLASEPGALSMNVSIWGYRDSLLSQYWICTTIDFRALLTRDCGDQ
DYVQWLAHSNDISDPKDGCILGYKEKFLRLKKDSVCWNGRDYQVNTLPTPCLCTLDDFLC
DFGYYRQENSSECVEQPELKGKVLEFCLHGKEEQLQTSGYRKIPGDKCEGGKMPERKEIE
LSMKCVSDLVAPQFLIDTHSSKFVGITVTVIIIMLLSVAAGVVFVKKYVCGGRFLVHRYS
VLQQHVEDNAVDVIDDPLETNHTQNGKIEFHDDSDEDMLE
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgatgggacttttgctgcactctctcctgctgttatctctctccacgttcacagccggt
gtcgattttcagctggaatcaaaacccttcgcacagtcgttcttgagacatttaaacatt
gaagagagagccgtgagcatcataaggagagctctgcctgcatggctgtctgcatcgccc
aaccacaagagaacacgaagaaacgccgagctgggcgaaaactgcaaagctcttcaagga
tatgacaccaagttagcagacaacacgcaccgttataacttcaatgacctgagtgggtcg
gtgtcgctggcctgggttggagatggcacaggggtcatcctggctttgacaacttttcag
gtgcccttcttcatgttacggctcgggcagtctaaactctatcgaagtgagaactacggg
aagtcattcgaggatgtgaccaatctaatcaacaacaccttcatcagatcagagtttggc
attgcaattggtagctctgggaaagtgatcctgacgggagaggtgtccggaggttatggg
tctcgggtctttgtctccaatgactttgggaagagtttcacccctcgggacctgcccttc
atccccctgatgcagatcacgtacaacccagataattccaatgtgctgctggccctcagc
aacagcaatgaactctggctgtctgaagatgttggcaacaactggaaaaagatccacgac
atggtgtgtcttgtaaaatggggaagaaaagataccatcttctttacagccaatcacaac
ggatcctgcagtaatcggggaatgctggaactgaaaaggtcgacagacttgggtaaaaac
atcaagactatcgccggtaagatctactccttcggccagggtggacgcttcctgtttgcc
tctgttatgacaggcaagggcactctgaggatgatccatgtgtcagtggaccagggtgag
acgtggaacatggcccagctgccccctgttggtcacgagcagttctactccatcctggca
gcaaacgatgacatggtcttcatgcatgtggacgagccaggagatacaggatttggcacc
atctatgtgtcagatgaccgtggcactgtgtactccaagtcattggagcgccacctttac
accaccacagggggggatacagacttcactaacgtcacctctctgcgaggagttttcctc
accagtgtcctggcagaagataagtctgtgcattctgtggtgtccttcgatcagggaggg
gagtgggttcccctgaggaaacctgccaacagcaagtgtgacgctacagccaaagaccca
gccaagtgcagtctccacatccacgcggcctacagtactgccatgcggctgaacttcccc
atgctccctctcactgaaacaaacgccgtgggtctcatcttggctcatgggagtgttggt
gattcgatctccgtgatgaagcctgatgtctatgtgtctgatgatggggggtacacctgg
attaaggcgctgattgggccccatcactatgctattctggactctggagggctgctggtt
gcggtggagcacagcactcgacctatcaacacgatcaaattttctactgacgaaggacag
tgctggggtgtttacaacttcaccaaagaccccatctactttactgggctggcatcagag
ccgggagctctctccatgaacgtcagtatctggggctacagagactccctcctcagccag
tactggatctgcaccacaattgacttcagagcgcttctcaccagagactgtggcgaccag
gattacgtgcagtggttggcccactcgaatgacatcagtgaccccaaagatggttgcata
ctgggctacaaagagaagttcctccgtctcaagaaggactctgtttgctggaacggacga
gattaccaggtcaacaccctgccaaccccgtgtctgtgcaccctggatgacttcctgtgt
gactttggatactaccgtcaggagaacagctcagagtgtgtggagcagccggaactgaag
ggcaaggtgctggagttctgcctccacggcaaagaggagcaactgcagaccagtggctat
aggaaaatccctggagataaatgcgagggaggaaagatgcccgagcgtaaagagatcgag
ctcagcatgaagtgtgtgagtgacctggtggcccctcaatttctgatagacacccactcc
tccaagtttgtaggcatcacggtgacagtcatcatcatcatgctgctgagcgttgcagca
ggagttgtcttcgtcaagaagtatgtctgtggtggcaggttcttggttcacaggtactcg
gtgctgcagcagcatgtcgaggacaatgctgttgatgtgatagacgaccccctggagacc
aaccacactcaaaatggcaagatagagttccacgacgactcagatgaggacatgcttgaa
tag
DBGET
integrated database retrieval system
