Pseudoliparis swirei (Mariana hadal snailfish): 130199196
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Entry
130199196 CDS
T09868
Symbol
cacna2d3a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04260
Cardiac muscle contraction
pswi04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130199196 (cacna2d3a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
130199196 (cacna2d3a)
04261 Adrenergic signaling in cardiomyocytes
130199196 (cacna2d3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130199196 (cacna2d3a)
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130199196 (cacna2d3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
dCache_2
Flagellin_N
CobT_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
130199196
NCBI-ProteinID:
XP_056278459
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Position
9:15362083..15484033
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AA seq
1086 aa
AA seq
DB search
MQLDRSCVISSAWCVCLLLLFSTLSTRVSEVGGTHQSIPASVVKLWASAFGGEMKSIAAK
YSGSQLLQKKYKEFERAVRVDEIDGLHLVKRLAEDMEEMFHKKAQALKRLVEAAEEAHLQ
HDEDPDLQYEYFNAVLINEVDEVGNSVELGGEFILQPNDHFNNLSVNLSLSVVQVPTNMY
NKDSAIVNGVYWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWKPDEHGVIAF
DCRNRKWYIQAATSPKNVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNE
ELHYVEPCLNGTLVQADVTNKDHFREHLNKLFAKGIGMLDMALTEAFNLLSDFNETGRGS
ECSQAIMLVTDGAVDTYDAIFAKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGYFT
QISTLADMQENVMEYLHVLSRPKVIDREHDTVWTEAYIDSTLDDGQGTVLMTTVAMPVFS
TKNETRNRGILLGVVGTDVPVSELLKTIPKYKLGIHGYAFAITNNGYILTHPDLRPIYGD
GKKRRKPKYSSVDLSEVEWEDKDDTLRNAMVNRKTGTFSMEVKKSVDKGKRVLVLHNDYY
YTNIKGTPFSLGVALSRGHGKYFFRGNVTVEEGLHDLEHPDVALADEWTYCNTDEHPEHR
YLSQMEAIKLYLSGHEPHLQCDKELIQEVLFDTVVTAPLEAYWTSLVLNKSENSDKGVEI
AYLGSRTGLSRINLFVVPDELTNQDFLTAEDKEGVFNGDHFPLWYKRAAEQVPGTFVYSL
PFNSGSENKSVVLASTAIQLLDERKSPIAAAVGIQMKLEFFQKKFWTASRQCAALDGKCS
ISCDDENINCYLIDNNGFVLVAEDYTLTGKFFGEAEGAVMSKLLQMGSFKRVTLYDYQAL
CWVFSESSDSGHTLLDPYFAFFSIVKWILTELVIFLVEFNLYSWWYSDLTAKAQRRGRPM
QVPCDTEYPAFVSERTIKENMGNVDCDGCIKSFVIQQIPSSNLFMVVVDNKCDCSMFEPI
TMEPIEIMYNESLKCKRLKTQKDRRRPDTCHPFHPEENSMECGGAVGLIPSLAATLPCVF
LALFPR
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggatcggagctgtgtgatttccagtgcgtggtgtgtgtgtctccttttactt
ttctcaactctaagcacgagggtcagtgaggtgggaggcacccaccaaagcatccctgcg
tccgtggtgaagctgtgggcttcagcttttggtggggagatgaagtccatcgccgcaaag
tactccggctcccagcttctgcaaaagaaatacaaggagtttgagcgggcagtgcgagtg
gacgagatcgatgggctgcatctggtaaagaggctggcagaggacatggaggagatgttt
cacaagaaagcccaggcactgaagagactagtagaagcagcagaggaagcccacctgcag
cacgacgaggatccagacttgcagtatgaatacttcaatgcggtgttgatcaacgaggtg
gatgaggtagggaacagcgtagagctgggaggagaattcatcctgcaacccaatgaccac
tttaacaacctgtcagtaaacctcagtctcagcgtggtccaggtgcccaccaacatgtac
aacaaagactctgcaatcgtgaatggagtgtactggtctgaggccttgaataaagtattt
gtggataactttgagagagacccatctctcatatggcagtattttggcagtgccaaaggc
tttttcaggcagtacccagggatcaagtggaagccagatgaacatggggtcatagctttt
gactgtcgtaaccggaagtggtacatccaggctgccacctctcccaagaatgtggtcatc
ctggtggacgtcagtgggagtatgaaaggcctcaggctgaccatagctaggcagacggta
tcctccatactggacactcttggagacgacgacttttttaacatcattgcctacaatgag
gaattgcattatgtggagccgtgcctaaatggaactcttgtccaagctgatgtcaccaac
aaagatcattttcgggagcacctcaacaagctgtttgctaaaggcattggcatgttagac
atggctctgactgaggccttcaatcttctcagtgatttcaacgagacggggaggggtagt
gagtgtagccaggccattatgttggtgactgacggtgcagtggacacttatgatgccata
tttgccaagtacaactggccagagaggaaggtccgcatattcccgtacctgattggtcga
gagtcagccttcgcagataatctgaaatggatggcatgtgctaacaaaggctacttcact
cagatttccacattggcagatatgcaggagaatgtgatggagtatctccacgtgctgagt
cgtcccaaggtgatcgaccgggagcacgacacggtgtggactgaggcctacatcgacagc
actttagatgacggtcaaggtacggttctgatgaccactgtggccatgccagtgttcagt
accaagaatgagactagaaaccgtggcattctgctcggggttgttgggacagacgtacct
gtctctgagctgctcaaaaccatccccaaatataagctgggtattcacggctacgccttt
gcaatcaccaacaacggctacatcctcacccatccagatctacggccaatttatggagat
ggcaagaagcgaaggaagcccaaatacagcagtgtggatctgtctgaggtggaatgggag
gataaggatgacacgctgagaaatgccatggtcaacaggaagacagggactttctcaatg
gaggtgaagaagagtgttgacaaagggaaacgtgttctagtgttgcataatgattactat
tacacaaacatcaagggaactcctttcagtctaggggtagctctttccagaggccatggg
aagtatttttttagagggaatgtcacagtggaggaaggacttcatgacttggagcatccc
gatgtcgcgctggcagatgaatggacgtactgcaacaccgacgagcacccagagcaccgc
tacttgtcccagatggaggcaatcaaactctacctcagtggtcacgaaccccacctgcaa
tgcgataaggagctgattcaggaggttctctttgacacggtggtgactgcccctttggag
gcctactggacgagcctcgtgctcaataagtctgagaactctgataaaggggtggagata
gcctacttgggctcaagaacaggcctgtccagaattaacctgtttgtggtgcctgacgag
ctaacaaaccaagactttctgacggctgaagacaaagagggggtgtttaacggcgatcac
tttcccctgtggtacaagagagccgcggaacaagttcctgggacctttgtttactctctc
cctttcaactcaggatcagaaaacaagagtgttgtattggccagcaccgccattcagctt
ctggatgagaggaaatcacccatagctgcggctgtgggcatccagatgaaattagagttc
tttcagaagaaattctggacagccagcagacagtgtgcagcattggatggaaaatgctcc
ataagctgtgatgatgagaacattaactgctacctcattgacaacaacggttttgttctg
gtagcggaggactatactctgacagggaaattctttggagaagcagaaggggctgtgatg
agtaagcttctgcagatgggctctttcaagagggtcactctgtatgactatcaggctcta
tgttgggttttttcagaaagtagtgacagtggacacacactgttggatccttactttgct
ttcttctccatcgtaaagtggatcctgactgagcttgtcatattcctggtggagttcaac
ttgtatagctggtggtactctgacctcacagctaaagctcagcggaggggtcgacccatg
caggtaccgtgtgacacggagtacccagcctttgtctccgagagaaccatcaaagagaac
atgggcaacgttgactgtgacggctgcataaagtcatttgtgatccagcagatccccagc
agtaatctcttcatggtggtggtggacaacaagtgtgactgcagcatgtttgagccaatc
accatggagcccatcgaaatcatgtataatgagtctctcaagtgcaagaggttgaagacg
caaaaggacaggaggcgcccagatacctgtcacccttttcacccagaggagaactcaatg
gagtgtggaggagccgtgggtctcatcccgtctctcgcagcaacactgccctgtgtcttc
ctagcgctgttccctaggtga
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