Pseudoliparis swirei (Mariana hadal snailfish): 130199199
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Entry
130199199 CDS
T09868
Symbol
prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00310
Lysine degradation
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130199199 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130199199 (prdm16)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130199199 (prdm16)
Enzymes [BR:
pswi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
130199199 (prdm16)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130199199 (prdm16)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
130199199 (prdm16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_11
zf-H2C2_5
SET
zf-BED
C2CH-4th_BIRD-IDD
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
130199199
NCBI-ProteinID:
XP_056278462
LinkDB
All DBs
Position
9:complement(9847066..10022629)
Genome browser
AA seq
1310 aa
AA seq
DB search
MRSKARARKLAKNDSEPVDSMYDTEADLPGLASGGGADSPEDDTDDGVINMSPLPSPTPS
HPNNNHHHLLHPHIYATHHHHHLHNNSNSSSNDQDFTTPKEGSPYEAPVYIPDDIPIPSE
LELRESSVPGAGLGVWAKTCIGAGERFGLHSTLHHEATGKDGSFGWEQMMNDHEEASPDS
CIKKVVDEMGNVKFALDTGPDGASSSWLKYVRSAPSFEEQNLAACHLTGDQIYYKAVRDI
EAGEELLVYMKDGIFPEGSMAPNLQDEQMYRCEDCDELFSSTLELRRHQKYSCSSTGSIF
DTLREDFKQEREDSDEPVHECKDCEKIFPNEYSLGQHMIVHTEEREYKCDQCPKAFNWKS
NLIRHQMSHDSGKRFECENCDKVQHTRHVFTDPSNLQRHIRSQHVGARAHTCPECGKTFA
TSSGLKQHKHIHSSVKPFICPDGLPLFAPPGEVCHKSYTQFSNLCRHKRMHADCRTQIKC
KDCGQLFSTTSSLNKHRRFCEGKNHYGSPAGMFNPGIPLSSSPIMAKVKSHHPHLQGLNH
SGLGFTDYFPSRSHPHAGLPFSPGAHGFPSLPHGFPGIFSPSLYPRPPLLPASSLLRSPL
GGGSQEVKLPRSLLDAPPLSLVSSTNTNGGNSLNPLEVKEKENKLDLSSGEAKPRSKMVD
LSDGSDLEDVNTTSGTDLDTTTGTASGDGSDLESDGESERERSGKRRKPSGAISSQEGHQ
LEDPDSALISAVSSSRNFAFDRPFQFSAPSQHSFFPPPDEQALPPTHTNANAATTDSIKA
IASIAEKYFGPGLIGLHQEKKMGPLPYHSMFPFQFLPNFHNSLYPFSADRGVLNPSMFFK
AEPKSPHEQLHKMVSGVPRAPAPTGESPFDLTAKTKETKLAHPTPTNPSKPKSSSGSSGG
PLAIPSGEEQPLDLSIGGRSRGGHNGVVAEPQNRKNHIFGVGKGVSIKDEIPAGFPLSHS
QSLHHAAIAQHQHQHAQPHQPPPLHYAKPSAFFMDPIYSRVEKRKLLDPVGALKEKFLRP
SPPLFHPQMSAMENMTEKLESFGALKLDVPPNSLHHAHPLFNFRSPPPSLSDAILRKGKE
RYSCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFK
CHLCNRCFGQQTNLDRHLKKHEHENIPVSQQSGMLSNLGTTISSPNSEPDNHALLDEKED
SYFSEIRNFISNSEMNQASSSTDKRSEQAEEERPSSHSKLGLRGLEEEEEEVEGDDEEEE
EGSLTEKSHDEAPESPSPVTTGVYVEDEEEEETETAPLAMGYEHTRRLMQ
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactggctaaaaatgacagtgaaccagtggacagc
atgtacgacacagaggccgacctcccgggtttagcaagcggaggcggtgccgacagccca
gaagacgacacagacgacggtgtcatcaacatgtcccccctgccctcaccgactccttcc
catccgaacaacaaccaccaccacctgctgcatccccacatctacgccacccaccaccac
caccaccttcacaacaacagcaacagcagcagcaatgaccaggacttcaccacacccaag
gagggctcgccctacgaggcaccggtctacattcccgatgacattcccattcccagcgaa
ctggagctgcgcgagtcctctgtgcccggtgccggcctgggcgtctgggccaagacctgc
atcggtgctggcgagcggtttggtctgcacagcacgctgcatcacgaggccacgggcaaa
gatggctcctttggatgggagcagatgatgaatgaccatgaggaagcttcccctgacagc
tgcatcaaaaaggtggtggatgagatgggcaacgtcaagtttgcactggacacaggcccg
gacggcgccagcagcagctggctcaaatacgtccgctccgccccgtcatttgaggagcag
aacctcgccgcctgccacctcaccggagaccagatttattataaagccgtccgggacatt
gaagcaggggaggagctcctagtgtatatgaaggacggcattttccccgaaggatccatg
gcacccaacctccaagatgagcagatgtaccgctgcgaagactgcgatgagctgttctcc
tcaacactggagctgcggcggcaccagaagtattcatgctccagtaccggctccatcttc
gacacactgagagaggatttcaaacaggagcgggaggacagcgacgagcccgtccacgaa
tgtaaagactgtgagaagattttcccaaatgagtacagtctgggccaacatatgatagtc
catacagaggagagggagtacaagtgtgaccagtgccccaaagccttcaactggaagtcc
aacctcatccgtcaccagatgtcacatgatagtggcaagcgctttgagtgtgaaaactgt
gataaggtacagcatacccgacacgtgttcacagatcccagcaacctgcagcgtcacatc
cgctcgcagcacgtgggggcacgtgctcacacatgccccgagtgtggcaagacttttgcc
acctcgtcaggcctcaagcagcataagcacatccacagcagtgtcaaaccctttatctgc
cctgatgggctgcctctatttgctcccccaggcgaggtgtgccacaaatcctacacccag
ttctccaacctctgccgccacaagcgtatgcatgctgactgccgtacccagatcaagtgt
aaagactgtgggcagttgttcagcactacctcctccctcaacaagcatcgccgcttctgt
gagggcaaaaaccattatggctctccagcagggatgttcaaccctggcatccccttgagc
tcaagccccatcatggccaaggtcaagtcccatcatccccaccttcaaggtctaaaccac
tcaggtctaggcttcactgactactttccctcccgatctcaccctcatgctggcttgccc
ttctcccctggagctcatggcttcccatccctacctcatggtttcccaggtatcttttcc
ccatcactgtatccgagaccacctttattgccagctagctccttgctaaggagcccactg
ggcggcggcagtcaggaggtgaaattgcctcgaagtctcctagatgcccctccactgtca
ctggttagctccacaaacaccaatggaggaaacagtttgaatccgctggaagtcaaagaa
aaagagaacaaactggatttgtcttctggagaagccaagccaagatctaagatggtggac
ttgtctgacggtagtgaccttgaagacgttaataccacaagtgggacagatttggacacc
accactggtactgcttcaggggatggttctgacctggagagcgatggagagagtgaacgt
gagcgaagtggcaaaagaaggaagccgtctggagccatatcaagtcaagaaggccaccag
ttagaagacccagacagtgcgttgatatcagctgtgtctagttctagaaactttgctttt
gatcgtccctttcagttttctgcaccatcccagcactccttcttccctccacctgatgag
caagccctcccacccacccacacaaatgccaatgcagcaacaacagattccatcaaagcc
atcgcctcgattgctgagaaatactttggtccaggtttgattggtctccatcaggagaag
aagatgggtccattgccttaccattccatgtttcccttccaatttctgcccaacttccac
aactccctctatcccttcagcgctgatcgaggtgtcctcaatcccagcatgttctttaaa
gcagagcccaagtcacctcacgagcagctgcacaagatggtgtctggtgtaccgcgagct
cctgctcctacaggagagtcaccatttgatctcaccgcaaagaccaaggagaccaagttg
gctcatccgaccccaacaaatccctcaaaacccaaaagtagttcggggagcagtggtgga
cctttggcaatacctagcggtgaagaacagccgttggacctgagcattggcggccggagc
cgaggaggtcataatggtgtggtggctgagccacaaaatagaaagaaccacatctttgga
gttggaaagggggtctccatcaaggacgaaatcccagctgggtttccactgtcccattcc
cagtcattgcaccacgcagccatcgcccagcaccagcaccaacacgcacagccacatcag
ccgccacctctgcactacgccaagccctccgcgttcttcatggaccccatatacagcagg
gtggagaagaggaagctactcgaccccgtcggagctctgaaggagaaattcctcagaccc
tcaccgccactctttcatccacagatgtcagccatggagaacatgacagagaagcttgag
agctttggcgctctaaaactggatgtgccgcccaattcgcttcaccacgctcacccactg
ttcaatttccgctcaccaccaccttccctctcagatgccatcctccgcaagggcaaggag
cgttactcctgcaggtactgcgggaaaatcttccctcgctctgcaaacctgaccagacac
ttgcggacacacacaggggaacagccctacaggtgtaaatactgtgaccgctcattcagc
atctcatccaatcttcaacgccacgttcgcaacatccataacaaggaaaaacccttcaag
tgtcacctgtgcaaccgctgcttcggtcaacaaaccaacctcgaccgccatctcaagaag
cacgagcatgagaacattcctgtgagccaacagtccgggatgctttccaacctaggaacc
accatctcctccccgaactcggagccagacaatcatgcacttttagatgagaaagaggac
tcatacttctcagaaatccgcaacttcatttccaacagcgagatgaaccaggcctccagc
tcaacggataagagatcagagcaggctgaggaggaacgcccatccagccactctaaacta
ggtctccgggggctagaggaggaggaagaggaagtggagggcgacgatgaggaggaggag
gaaggcagcctgacagagaagtctcacgacgaggcgcctgagtccccgtcccctgtcaca
acaggagtgtatgtggaggacgaggaggaggaagagacggagacggctccattagcgatg
ggctatgaacacactcgcaggcttatgcaatga
DBGET
integrated database retrieval system
