Pseudoliparis swirei (Mariana hadal snailfish): 130199332
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Entry
130199332 CDS
T09868
Symbol
ccdc187
Name
(RefSeq) coiled-coil domain-containing protein 187 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130199332 (ccdc187)
Membrane trafficking [BR:
pswi04131
]
Autophagy
Other autophagy associated proteins
Others
130199332 (ccdc187)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
ArnB_C
Motif
Other DBs
NCBI-GeneID:
130199332
NCBI-ProteinID:
XP_056278706
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All DBs
Position
9:complement(20793344..20808691)
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AA seq
818 aa
AA seq
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MVTAVCRLDVPLTMNLEATHSFSSPMTPSSESPAMCQCFAVLEDGALAHNLQEQEIEQYY
STNVQKNQLVQNDIRVAKRLQDEEEEERAQQSTLLRQASRQLEMDDFEYARIIQDEIQRG
AEETRRREQEDEEIARRMQDEETQSLSRVSRGQEGHRQGSTSPRQHTLGGLHQGEAQYPS
PTTRWQCSTSHTHADLTGPLADSPRGLAQKNTTSWSNQGHTDYIRGESEECVSQDSEDSD
TFYSPQHSVGSQRLNERRKTAPPRRRAPLHQPRERNYRSLDSGSSLTEEERGGWTESHHG
NGDRETRKPRNLDRERNRREVSQSFHSSRGQDRDCRSDQVRERRSFSRSESVRIHDGSQR
SHDLARTRSYTENPDKRVRFQEHTRSSFRQQGETARVWAMLGQVLRERGVPVRFGSSGAP
LQIRPQSADGQALHGREVSRSDSQPHQRAFRRAAAARHSFHGDIRERRRCQESGGRDHRE
DGDRHGDDAPRDGNACEVTRGDSRLAPRERGGSGRWREHRPTSDNERNANDPRVERTTSQ
RRCRHKTIEERLSSEEEEEEEEEERPCPRAPRRTQSLSSSRRASSGVGSRRVAAGAPRQP
EPGEQSLDMGELRQVLQDEELAHKLQEDEDRRQRRRRKSHPSPCSFYPEGDFRVAQVAQD
EEIARFMQKQEVKAKRRSRELEGSSSWREHRAAVGDHDRRAARDRPVQRERLDSEGLPSP
AEDCSPENRPPSPFATLPHAQHVRNIAEELDPTFQARRQSTESLGGGPAGPTCQSLPRPQ
AGLRNLLEEATFIPPTKRQTDKSGRAKPKEKKENCKQQ
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggttacagcggtctgtaggctcgatgtccctctgacaatgaatcttgaggccacccat
tcgttctcgtcacccatgacaccatccagcgaatctccagctatgtgccagtgtttcgct
gtgctggaggacggagcgttggcccacaacctgcaggagcaggagatcgagcaatactat
agcaccaacgtccagaagaaccagctggtgcagaatgacatccgtgtagcaaaaagactg
caggatgaggaggaagaggagcgagcccagcagagcaccctcctccgacaggcctccaga
caactagagatggacgactttgagtacgcccgtataattcaggacgagatccagcgtggt
gctgaagagacccggaggagggagcaggaagatgaggaaatagccagacgaatgcaggac
gaggagacgcagagcctctcgagggtcagcagagggcaggagggccatcgtcaaggcagc
acatccccgcgccagcacacactcggtggccttcaccaaggagaggcgcagtacccgtct
cccaccaccaggtggcaatgctctacctctcacacccatgcagacttaactgggcctctg
gcggactctcctcgggggttagctcagaaaaacacgacttcatggtcaaatcaaggacac
accgattacatcaggggtgaatcggaggagtgtgtgagtcaggattcagaggactcggac
accttttattcaccacagcactccgtcggctcccagagactgaacgaaagacgcaagacg
gcgccccctcgccggcgggcgccgttgcatcagccgcgagaaagaaactacaggagcctt
gactctggcagcagcctcacagaggaggagagaggaggatggactgagagccatcatgga
aacggtgaccgagagacgaggaagccgaggaatttggatcgggaaaggaaccgtagagag
gtatctcagagtttccacagcagcagaggtcaggatagagattgcaggtcagaccaagta
agagaacggcgcagctttagtcgcagtgaatctgtgaggattcacgacgggagccaacgc
agtcacgacttggcgaggacccggagctacacggagaacccagacaaacgcgtccgtttt
caggagcacaccaggagctctttcaggcagcagggggaaaccgcacgggtctgggcgatg
ctgggccaggtcctcagagagaggggcgtgcccgtgaggttcggcagcagcggggcgccg
cttcaaatccggcctcaaagcgcagacggccaggcgctccacgggcgagaggtctcccgt
agcgactcccagccacatcagagggctttccgccgagccgccgccgccaggcacagtttc
catggagacatccgggagaggaggagatgccaggagagcggcgggagagatcacagggaa
gacggggaccggcacggcgacgacgcgcctcgcgatggaaacgcgtgcgaggtcacccgc
ggggactcccgtctcgctccgagagaacggggaggcagcggccggtggagagagcaccgg
cccacgagcgataacgagaggaatgcgaatgatcccagggtcgagaggacaacgagccaa
cgccggtgtcggcacaagaccatcgaagaaaggttaagctctgaggaggaggaggaggag
gaggaggaggagaggccctgtcccagagccccacggcgaacccaaagcctcagcagcagc
agacgggcttcaagcggggttgggtcgaggcgcgtggcagcaggagcgccgcggcagcca
gagccaggcgagcagagcctggacatgggcgagctgcggcaggtcctccaggacgaagag
ctggcccacaagctgcaggaagacgaggacaggcggcagaggaggaggaggaagtcccac
ccctctccatgtagtttctacccagagggagacttccgagtagctcaagtggcgcaggat
gaggaaatcgcacgctttatgcagaagcaggaagtgaaggcaaagcgaagatctcgcgag
ctggagggctcgtcctcgtggcgcgagcaccgagcggcggtcggcgatcacgaccggcgg
gccgcgagagacagaccggtccagcgagagaggctggactcggagggcctcccctccccc
gctgaggactgctccccagagaaccggccgcccagccccttcgccactctaccacacgcc
cagcacgtcaggaacatcgcggaggagctggacccgaccttccaggcccggaggcaaagc
acggagagcctcggagggggaccggcaggtccgacctgtcagtcgctccccaggcctcaa
gcgggcttacgcaacctactggaggaggcgaccttcatcccgcccaccaagcggcaaacg
gacaaatcgggacgggcgaaacccaaagagaagaaggaaaactgcaagcaacaataa
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