Pseudoliparis swirei (Mariana hadal snailfish): 130199409
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Entry
130199409 CDS
T09868
Symbol
rbm15
Name
(RefSeq) RNA-binding protein 15
KO
K13190
RNA-binding protein 15
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130199409 (rbm15)
03041 Spliceosome [BR:
pswi03041
]
130199409 (rbm15)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
130199409 (rbm15)
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130199409 (rbm15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
Nup35_RRM_2
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
130199409
NCBI-ProteinID:
XP_056278857
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All DBs
Position
9:12450241..12454887
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AA seq
849 aa
AA seq
DB search
MKGKERSPIKKRSRALDDIRDRGGGCHPTSKKMGALAVSSGSNNGNNPAKSDGSSTRRSL
LGEKRERDFDGHSRPGNNHSCQSAAASSIGKPHSLSLTLDLASARTALRAEPRVQPPSVE
SEYKTLKISDLGTQLSDEDIEDGLFHEFKKFGDVSLKISRSNDERIAFVNFRKPEDARAA
KHARGRLVLYDRPLKIEAVYINRRRSRSPVERDLYGAAHRHLQRPLSPTGLGYRDYRLQQ
LAMGRLPPPPPPPLPRDLERDREFALFEARARPAFIAERAAFREEDFISPEDDQRANRTL
FLGNLDITVTEADLRRAFDRFGVITEVDIKRPTRGQTSTYGFLKFENLDMAHRAKLSMSG
KIVGHNPIKIGYGKATPTTRLWVGGLGPWVPVAALAREFDRFGTIRTIDYRKGDTWAYIQ
YESLDAAQAACTHMRGFPLGGPERRLRVDFADTEHRYQQQFLQPLPIPPFDMVAESFVHR
ATPEPLRVRERTPPPLHFRERELFPGTEWPNPALRDRVRASPFEPLEHLERERRAREPWS
LERELQGREPARKRRLMEDGRHIDHSPDSTERTGRRRRASPDGSPGGSSRDGGRFSDPER
PLRAERPSPARERHGSLERSVAERRLKTQSLSDKGPPSSSVSSVVERKRKAGDGGKGPAK
RERSENNAKGGQPSKPDGTKLSLAWHGMLLLKNSNFPANMHLLEGDHSVARDLLTEGTSG
RPVGELKITQRLRLDQPKLDEVSRRIKVAGPGGYAILLAVPGPTEDSSSSDPAASTQRPL
RNLVSYLNQKQAAGVISLPVGGSRDKDNTGVLHAFPPCDFSQQFLDSSAKALAKSEEDYL
VMIVVRGAS
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtaaagagcggtcgccgatcaaaaaacgctcccgggccttggacgacatacga
gacaggggaggaggatgccacccgaccagcaagaaaatgggggctctcgcggtttctagt
gggagtaataatggaaataacccggcaaaaagcgacggcagctcgacgagaaggagttta
ctcggcgagaaaagagagcgagattttgacggtcacagtcggcccgggaataaccacagc
tgtcagtccgctgccgccagctccatcgggaagccccacagcctgagcctgacgctggac
ctggcctccgcgaggaccgctttgcgggcggagccgcgggtgcagccgcccagcgtcgag
agtgagtacaaaaccctcaaaataagcgacctcggcacccagctgagcgacgaggacata
gaggacggactttttcacgagttcaaaaaattcggcgacgtgagcttgaagataagccgg
agcaacgacgagcggatcgccttcgtgaatttccggaagccggaggacgcgcgagctgcg
aagcacgcgaggggccggctggtgctgtacgaccggccgctgaagatcgaggccgtgtac
atcaacaggaggagaagccgctcccccgtggagagggacttgtacggggcagctcataga
catttgcagagacccctctcgcccaccgggctcggatacagagactaccggctgcagcag
ctggccatggggcggctgccccctcccccgccgccccctctgcccagagacctggagcgg
gaccgggagttcgccctgttcgaggcccgggcgcgacccgctttcattgcagagcgggca
gcttttcgcgaagaggattttatatctccagaagatgaccaaagagccaataggacgttg
tttttaggaaatctggacataactgttacagaggcggacctgaggagagcttttgaccgg
tttggggtcatcactgaagtggacataaaaagacccacacgaggacaaaccagcacatat
ggatttctgaaatttgagaatcttgacatggctcaccgtgctaaacttagtatgtctggc
aaaatagtcggccacaaccccataaagataggttatgggaaagcaactcccaccacgcgc
ctgtgggtggggggactcggaccctgggttcctgtagctgccttagcaagagagtttgat
cgttttggcactataaggaccattgactacaggaagggggacacttgggcctacattcag
tatgaaagtttggatgccgcacaagcggcatgcacacacatgaggggctttccgctggga
ggtccagagagaagacttcgagtggactttgctgacactgagcaccgttaccagcagcag
ttcctgcagcctctcccaattccaccatttgacatggtggctgagtcatttgtccaccgg
gccacacctgaacctctgagggtcagggaacggactccaccgccccttcatttcagggaa
agagaactctttcctggaactgagtggcccaatccagctcttcgtgaccgggtacgggct
tcaccctttgagcctctagagcacttggaacgtgaacggcgggcacgagagccctggtca
ttggaacgagagctgcagggacgagaacctgcacgcaagcggcgattgatggaggacgga
cgccatatcgaccactcccccgacagcaccgagaggacaggaaggcggagacgtgcttct
ccagatggcagtcctggaggtagcagcagagacggagggcgcttcagtgacccggagcgc
cctctgcgggccgagagaccctctcctgcacgagaacgtcacggcagcctggaaagaagt
gtggctgaacggaggctcaaaacccagagtctctccgacaaggggccaccgagcagcagc
gtttcttcggtcgtggagcgtaagcgcaaagccggcgacggtggcaaagggccggccaaa
agagagcgttctgagaacaacgccaaggggggccagccgtccaaaccagacggcacaaaa
ctcagtttggcctggcatggtatgctgctcctcaagaacagcaacttcccggccaacatg
catctgctggagggcgatcacagcgtggcccgcgacctgctcaccgagggcacgtcaggg
cgaccggtgggcgagctcaagatcacccagcggctccgtctggaccagcccaagctggac
gaggtgtcccggcgcatcaaggtggcgggtcccggtggctacgccatcctgctggcggtt
cccgggccaacggaggattcgtcttcatctgaccctgcagcctcgactcagcggccgctt
cgcaacctggtgtcctacctcaaccaaaaacaagccgccggagtcatcagcctacctgtg
ggggggagccgggataaagacaacaccggggtccttcatgctttccctccctgtgatttc
tcccagcagttcctggattcctctgccaaagctctggctaaaagtgaagaggactatctg
gtcatgattgtggtccgtggagcatcttaa
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integrated database retrieval system
