Pseudoliparis swirei (Mariana hadal snailfish): 130199411
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Entry
130199411 CDS
T09868
Symbol
nfascb
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130199411 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130199411 (nfascb)
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
L1 family
130199411 (nfascb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Ig_6
V-set_CD47
BiPBP_C
C1-set
DUF3792
Motif
Other DBs
NCBI-GeneID:
130199411
NCBI-ProteinID:
XP_056278863
LinkDB
All DBs
Position
9:complement(21529080..21540902)
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AA seq
1179 aa
AA seq
DB search
MGILVEPALLLILWQSVWALDIPLEIRQPPVIIKQSMKDHIVDPKDTMVIECEARGNPHP
IFSWRRNGKYFNVARDSQASMRRRSGTLDIYAWNNPEQYEAEYQCIASNMYGSAYSNKIR
LRLYRPPVWPREILEPVVVSAGLPLVLSCDPPRGPPTPETYWMSSCSYARPFNWPIQTAF
PTMQPVWPDRRVSMGVNGDLYFSNILFNDSAADYCCNARFPNKNVIQQKMPVVVKVLTTR
TVAEAAPTWLSPTGSSSSILVLQGEELLLECISAGVPTPSITWTKNGDRLVVSPRMKVKN
FNKMIQIPKASFEDAGEYTCTATNKIGYIQHTITVRVKAAPFWLEKPTDLVLAPEENGRL
LCQSDGAPRPTVSWFINGEPIETATPQPNRQVSGDTLTLRSVTVENTAVYQCNVSNQFGY
LMANAFVNVLHATPRIIGPKNELIKVIEGSRTLLDCRYFGSPVPELRWSKYGQGTLEGNR
FKTQGNGTLEIQNIRIEDQGTYVCVVSNIAGRDESQVRLEVKEPTLIVTRPQSMKVIRGS
DVRFECGVKADVTTPVTTTWMKGKKHVTLGWRISLDESNLVITNVNGGDEGNYTCVIKSE
LDQKYASARLMVMDRPDPPSKLELSDPYERSVRLSWVAGDSNHNPITEYLVQYDDDDWLP
GKWRNLSTYPGNLNSVILHLTPFTYYEFRVIAINEIGMSRPSRPSTRFQSSGAPPDIIPK
NLKGVGTWRNNMEISWEPLTYREWNGPHLKYLVWWKRRDSREEWKNATTKWLRYYIYDAD
TFTPYDLKVQAVNDFGLGPESPVVIGYSGEDRPLTAPMNLRVSDIESTQVTLHWDSVTRG
SMMGDLKEYKAYYWRDSSQLRWLWVNRGMKSKAFSNNDPEPSGVLTGLIPYSNYKLYLVV
ANNRYEGPAGNNIHFSTPEGVPSVPRSFRIQQRHLDSIYVDWDIPAEPNGVIIGYSLKYQ
TVNATREEESRVEEFTPNVTSFSLRRFDRYTRYRFSVAAQTRIGIGEWHTEESQHYTTET
YAQDQVDISTQGWFIGMMCAVALIVLILLIVCFIKRSRGGKYPVREKKDISLEPVDDNDQ
EGSFDYRSLERIARISTLPYPRREEERGLQRGQLHMDTMMKRSASDDSLVDYGEGGEIPF
NEDGSFIGQYTGTRRDVREMDFGASLQIHSPMKTIYSLA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggggatactggtggaaccagcgctgctccttattttatggcagagcgtttgggctttg
gacatccctctggaaatcaggcagcccccggtcatcataaagcagtcgatgaaagatcat
attgttgaccccaaagacaccatggtcatcgagtgtgaagccagaggaaaccctcatccc
attttctcatggagacgtaacgggaagtatttcaacgtggcccgtgactctcaagcgtcg
atgcgaaggcgttcagggactctggacatctacgcctggaacaatccagaacagtacgag
gcagagtatcagtgcattgcctccaatatgtatggatctgcatattccaacaagatcaga
ctacggctatacagacctcctgtttggccgagggagattctggagcctgtggtggtcagc
gctggcttgcctctggtcctgtcctgtgacccgccacgaggcccgccgacacctgaaacc
tactggatgtccagctgctcatatgcgaggcctttcaactggcccattcagaccgctttc
cccaccatgcagccggtgtggccggaccgcagggtgtctatgggagtgaacggagatctg
tatttctctaacatcctgttcaacgactctgctgctgattactgctgtaacgcccgcttc
cccaacaagaatgtcatccagcagaagatgcctgtggtcgttaaagtgctgacaactcgc
acggtggccgaggccgccccaacctggctgtctcccacaggctcatccagctccatactc
gtcctgcaaggggaagaacttctcctggagtgtatcagtgcaggagtgccgactcccagt
atcacatggaccaagaatggcgaccgcctggtggtatcgcctcgcatgaaagtaaagaac
ttcaacaagatgattcaaatcccaaaagcatcttttgaggatgcaggagaatatacttgc
accgctaccaataaaattggatacattcagcacacaataaccgtcagggtcaaagcggcc
cccttctggctggagaaacccacggatctggtcttagccccggaggaaaatggacgcctg
ttgtgtcaatctgatggggctccgcgtcccacagtcagctggttcatcaacggggaaccg
attgaaactgctacacctcagcctaacagacaggtgtcaggagacacgctgactttacgc
agtgtgaccgttgaaaacactgcagtctatcagtgcaatgtttccaatcaatttgggtac
ttgatggccaatgcttttgtcaacgtgctgcatgcaacgccacgtattattgggcccaag
aatgagctcatcaaggtgatagagggcagtcgtaccctccttgactgccgctactttggt
tctccagtacctgaattgcgatggtctaaatatggacagggtactcttgaaggcaatcgt
tttaagactcaaggtaacgggactctggagatccaaaacatacggatagaggaccaggga
acttacgtttgtgtagtcagcaacatcgcaggaagagatgagagtcaagtcagattagag
gttaaagagcccactttaattgtcacaagaccacagagtatgaaggtcatccgtgggagt
gatgtgcgctttgagtgtggtgtgaaagcagatgtaacgactcctgtcacaaccacctgg
atgaaaggcaaaaagcacgtcactctcggctggaggatttctctggatgaatcaaatctg
gtcatcactaatgtaaacgggggtgatgagggaaattacacctgtgtgatcaagagtgag
ctggaccagaagtatgcctcagcacgcctaatggtgatggaccgtccagatcctccctcc
aagttggagttgtccgatccatatgaacgtagtgtcagactcagctgggtggctggagac
agcaaccacaaccctataacagagtacttggtgcagtatgatgatgatgactggttgcct
ggtaagtggagaaacctttcaacgtatccagggaacctcaactctgtcatcctgcatctc
acgcctttcacctactacgagtttcgggtaatcgctatcaatgaaatcggaatgagtcgc
ccgagtcgtccatccacgcgcttccagagcagcggtgctcccccagatattatcccaaag
aacttaaagggtgtgggtacatggaggaataacatggagatcagctgggagcctctgacc
tacagagagtggaacggaccccacctgaagtatctggtgtggtggaaaaggagagattcc
cgagaggagtggaagaatgcaaccactaaatggctgagatactacatctacgatgcagat
accttcactccgtatgacttaaaagtccaggctgtcaatgactttgggctgggtccagag
tctcctgttgtcattggttactctggggaggaccgtcccttaaccgcaccaatgaacctg
agagtgtccgacatcgagagcactcaggtgactttgcactgggattcagtcacacgcggc
tcaatgatgggcgatctgaaagaatacaaggcctactattggagggacagcagccagctg
aggtggctgtgggtcaatagagggatgaagtcgaaagcgttttcaaacaacgatccagag
ccctctggggtcctcaccggactcatcccctatagcaactacaagttgtatttagtcgtg
gcaaacaatcgttatgaaggtccggcgggaaataatatccacttctcaacgcctgaggga
gtaccatctgttcccagatctttcaggatccaacagcgacatctagacagtatttatgtc
gactgggacattccagctgaacccaacggtgtcattattggatattccctcaagtaccag
acagtgaacgccaccagggaagaggagtctcgagttgaggagttcactccaaacgtaaca
agtttctcgctccggcggttcgaccgctacactcgttacagattctccgtggcggcacag
actcggatcgggataggggagtggcatacggaagagtcgcagcactacaccactgaaaca
tatgctcaggaccaggtggacatctccactcagggctggttcatcgggatgatgtgtgca
gtggctctcatcgtgctcatcctactcatcgtctgcttcatcaagaggagccgagggggg
aaatacccagtacgggaaaaaaaagatatttcattggagccagtggatgacaatgatcag
gagggatcattcgactacaggtctcttgaaaggatagcacgtatctccactctgccttac
ccccggcgagaggaggaaagggggcttcaaagaggccagctgcacatggatacaatgatg
aagcgatcagcgagcgacgacagtctggtggactacggggaaggaggagagataccgttc
aacgaggacggctcgttcatcggccagtacacaggaaccaggagagacgtcagggagatg
gactttggtgcaagtctgcagattcactctcccatgaaaaccatctactccctggcgtaa
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integrated database retrieval system
