Pseudoliparis swirei (Mariana hadal snailfish): 130199442
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Entry
130199442 CDS
T09868
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04510
Focal adhesion
pswi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130199442 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130199442 (lamb2)
BRITE hierarchy
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Laminin_II
EzrA
F5_F8_type_C
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
130199442
NCBI-ProteinID:
XP_056278896
LinkDB
All DBs
Position
9:1686697..1739901
Genome browser
AA seq
1783 aa
AA seq
DB search
MHAPLLALLCVLAAAAGQGPDHSHGCAQGSCYPATGDLLVGRQKSLKASSTCGMRRKEPY
CIVSHLQDEKKCFDCDSRRPYDPVYNTINHRIENVITTFKPLKTWWQSENGKSDVFVQLD
LEAEFHFTHLIMTFKTFRPAAMLIERSADFGRTWQIYRYFSHDCSRAFPGVPQGPLRNIN
DIICESRYSDIEPSTQGEVIYRVLEPAIDIEDPYSPSIQNQLKITNLRVNFTKLHTLGDN
LLDPRAEIKEKYYYAIYELVVRGNCFCYGHASECAPIDGVRDGIERMVHGRCVCNHNTKG
LNCEQCDDFHNDLPWKPAEGSSSNACRKCSCNRHSTQCHFDMAVYLATGNLSGGVCDDCQ
HNTMGRSCESCRPFYYQDPVRDMRDPRVCVACDCDPDGSQNGGMCDGRTDPSLGAVGGLC
RCKANVEGPRCDKCKTGFFGLSPHNPQGCQPCRCDHRGTVSGNSQCDPVSGDCFCKRLVT
GRSCDQCLPEHWALSLDLNGCRRCECDVGGALDNHCSVESGECRCRSHMTGRQCAQVESR
FFFMALDHFLYEAESATMGQGCTLETREHQPGRPATWTGLGFARAPEGGTLKFLISNVPY
SMEYDLLIRYESQMPRDWEEVRVTVIRPGPIPTSSPCGNTIPDDDRLTVSLPAGARFAVP
PHAVCLERGVTYTLRFEFKRYHDANSILNGAADAVLLVDSIALMPRPSSLEMFNAGDPAS
DNRKQAYARYRCHEAAKGVARPAMSDTCAKLVASMSAVVNDGALPCSCDLQGSTSSMCDV
RGGQCHCRPNVIGRRCDQCAPGTHGFGPSGCIACGCSLEGSVTRLCDKFSGQCRCRPGAF
GQRCDGCQAGHWGFPSCRPCLCNSHADRCDQRTGACVSCRDNTGGDTCDRCANGYYGNPV
LGKAPSAQCRACPCPDGPDSGRHFAASCYQDDRNRQIICNCNQGYTGARCGECAPGFYGN
PSRPGGRCQPCRCNNNIDVSDAAACDRQTGRCGKCLYNTEGGDCGVCKSGYFGDASRRNC
RKCTCNFLGTDRGQCMEREDCVCQRATGQCQCLPHVIGLPCDHCAPDHWNLAGGRGCESC
GCDPNNSVTSSCNEFSGQCQCRDGFGGTTCTDCQENYWGDPGTQCRACDCDWRGIETSQC
HRVTGHCVCQQGVSGVRCDQCARGFSGHFPDCQPCHKCFGDWDRIVQDLAVRTKTLAGRA
HEIQTTGLTGAYEKAFGALEEKLARARGIVDARNATAAAVATLMELIEDLRAQIGESTDS
LNRLEGDLTTVQDSSSEASKELSALEREARELNLTSEQLHRQLDVLKNSNFLGAFDSIHS
SYNKSREAERRANDSTTARPSTVSQSADTRRRTERLIAAKKDDFNRKNAANKRALADLSG
RAQGLDLKKINEKVCGAPGDAPCGESPCGGAGCLDDEGSRHCGGLNCNGAVAMAHNALET
AKHAEKQLHKAMGDVEGLYTKVADAKTRAEEARGKAQAALDKATATKNQVERSNNDLRDL
IKQIRDFLTQEGADPDSIEAVANRVLELSIPASPLQIRHLADEIKERVRSLSNVDAILRQ
TQGDVREAERLLLDAKRARHSAEGVKATAETVRRALLDAQAAQTSAEKAIGRATADIGET
EARLVQIESETSNSEKDLSEAMDRLGTLGREVAALQTKRANNSMAAARAEETATMARDKA
NEAKQILDGQLTDKYHEVQQRVDTKAKAVQEAKKRAESLREEAKELLRDAQNKLHRLAEL
EKNYEENQKHLEGKARQLDGLEDKMKSILSDINKQIQIYNTCQ
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgccactgctcgcgctgctctgcgtcctggctgctgccgccggccaggggccc
gaccacagccacggctgcgcccagggcagctgctacccggcgacgggcgacctgctggtg
ggacgacagaagagcctaaaggcctcgtccacatgcggcatgcggaggaaggagccgtac
tgcatcgtcagccacctgcaggatgagaagaagtgcttcgactgtgactccaggcggccg
tacgacccggtgtacaacaccatcaaccaccggatagagaacgtcatcaccaccttcaag
cccctgaagacctggtggcagtcggagaacggaaagtcggacgtcttcgtccagctggac
ctggaagccgagtttcatttcactcacctgatcatgaccttcaagaccttccgtccggcg
gccatgctgatcgagcgctccgcagacttcggccgcacgtggcagatctaccgctacttc
tcccacgactgctccagggccttccccggagtcccccagggtcctctgaggaacatcaac
gacatcatctgtgagtcgcgctactccgacatcgagccgtcaacgcagggagaggtcatc
tacagagtgttggagccagccatcgacatcgaggacccgtacagccccagcatccagaac
cagctgaagatcactaacctgagagtgaacttcaccaagcttcacacgctgggagacaac
ctgctggacccccgagccgaaatcaaagagaagtactactacgccatctacgagctggtc
gtacgcggaaactgcttctgctacggccacgcctccgagtgcgcccccatcgacggcgtc
cgggacggcatcgagcggatggtccacggcaggtgtgtgtgcaaccacaacaccaaaggg
ttgaactgcgagcagtgcgacgacttccacaacgacctgccctggaagccggccgagggc
agcagcagcaacgcctgcaggaagtgctcctgcaaccgccactccacccagtgccacttc
gacatggcggtgtatttggccacgggcaacctgagcgggggggtgtgtgacgactgtcag
cacaacaccatggggcgcagctgtgagagctgcaggcccttctactaccaagaccccgtc
agggacatgcgggaccccagggtctgcgtcgcgtgcgactgcgacccggatggatctcag
aacggagggatgtgcgacggccgcacggacccgtccctcggcgccgtgggcggtctgtgc
cgctgcaaagccaacgtggaggggccgcgctgcgacaagtgtaagacgggcttcttcggc
ctgagcccccacaaccctcagggctgccaaccgtgccggtgcgaccacaggggaaccgtg
tcgggcaactcccagtgcgacccggtcagcggagactgcttctgcaagcggctggtcacc
gggcgcagctgcgaccagtgtttgccggagcactgggctctgagtctcgacctgaacggt
tgccgtcgctgtgagtgtgacgtcgggggggcgctggacaaccactgctccgtggagagc
ggtgagtgtcgctgccgcagtcacatgacgggacgccagtgtgctcaggtggagtcccgg
ttcttcttcatggctctggatcacttcctgtatgaggccgagtcggccacgatgggccag
ggctgcacgctggagacccgggagcaccagccggggcgccccgccacgtggaccggcctc
ggattcgcccgggcacccgagggcggcaccctgaagttcctcatcagcaacgtgccgtac
tccatggagtacgacctgctgatccgctacgagtcacagatgccccgggactgggaggag
gtgcgagtcacggtgatccgcccggggccgattcccaccagcagcccctgtgggaacacc
atcccagacgacgaccggctcaccgtgtccctgccggccggagccaggtttgcggtccct
cctcacgccgtatgtctggagagaggcgtgacgtacaccctccgcttcgagttcaagcgc
taccacgacgccaacagcatcctgaacggggcggccgacgccgtcctcctcgtggactct
atcgccttgatgccgcgcccctcctccctggagatgttcaacgccggcgacccggcctcc
gacaacaggaagcaggcgtacgcgcggtaccgctgccacgaggcggcgaagggcgtcgcg
cgcccggcgatgagcgacacctgcgccaagctcgtcgccagcatgtcggccgtcgtgaat
gacggggctctgccttgtagttgtgaccttcagggctccaccagctccatgtgcgacgtg
cgcggtggccaatgccactgcaggcccaacgtgattggtcgacgctgtgaccagtgcgct
ccaggaactcacggcttcggaccgtcgggctgcatcgcctgcggctgcagcttggaggga
tccgtgacgagactctgcgacaagttctcgggtcagtgccggtgccggcccggagcgttc
ggccagcggtgcgacggctgccaggcgggtcactggggcttccccagctgcaggccgtgc
ctctgcaacagccacgcagacaggtgtgaccagaggaccggagcctgcgtcagctgcagg
gacaacacgggaggagacacctgtgacaggtgtgccaacggttactatggtaacccggtc
ttgggcaaagcgcccagtgctcagtgtcgcgcgtgtccgtgtccagacgggcccgacagc
ggacgccacttcgctgcgtcttgttaccaggacgaccgtaaccgacagatcatctgcaac
tgtaaccagggctacacgggagctcgctgtggggaatgtgctccgggtttctacggcaac
ccgtctcggcccggcgggcgctgccagccgtgccggtgcaacaacaacatcgacgtgtcg
gacgcggccgcctgcgaccggcagacgggccgctgcggcaagtgcctctacaacaccgag
ggcggcgactgcggcgtctgcaagagcggctacttcggcgacgcctcccggcgcaactgc
aggaagtgcacctgtaacttcctgggcacggaccggggccagtgcatggagcgggaggac
tgcgtgtgccagcgggcgaccggccagtgccagtgtctgccccacgtcatcgggctgccg
tgtgaccactgcgcccccgaccactggaacctggccggcgggaggggctgcgagtcgtgc
ggctgcgaccccaacaactcggtcacctcctcctgcaacgagttctccggtcagtgtcag
tgtcgggacggcttcggagggacgacctgcacggactgtcaggagaactactggggagac
cccgggacgcagtgcagagcctgcgactgcgactggcgaggcatcgagacgtcccagtgc
caccgggtgaccggccactgtgtctgccagcagggggtgtcgggcgtccgctgtgaccag
tgtgccagaggcttctccggccacttccccgactgccagccctgtcacaagtgcttcggg
gactgggaccgcatcgtgcaggacctggccgtgcgcaccaagactctggcgggccgggcc
cacgagatccagaccaccgggctcaccggggcctacgagaaggccttcggggccctggag
gagaagctggctcgagctcgggggatcgtggacgcacgcaacgccaccgccgccgcggtc
gccaccctgatggagctcatcgaagatctcagagcgcagatcggtgagagcaccgacagc
ctgaaccgcctggagggcgacctcaccacggtgcaggacagcagctccgaggccagcaag
gagctgagcgctctggagagagaagcccgagagctgaacctcacctcggagcagctgcac
cggcagctggacgtcctgaagaactcaaacttcctgggtgcgttcgacagcatccacagc
tcctacaacaagtcgcgtgaggcagagcgccgcgccaacgactcgaccaccgcgcggccc
agcacggtcagccagtctgcagacacgcggcgccgcaccgagcgcctcatcgccgccaag
aaggacgacttcaaccgcaagaacgccgccaacaagcgagcgctcgcagacctcagcggc
cgagctcagggcctggacctgaagaagatcaacgagaaggtgtgcggcgccccaggtgac
gccccctgtggtgaaagcccttgtggcggagcaggttgccttgacgatgaagggagccgt
cactgcggaggactgaactgtaacggcgccgtggcgatggcccacaacgccctggagacg
gccaagcacgccgagaagcagctccacaaggccatgggggacgtggagggcctctacact
aaggtggccgacgccaaaaccagagcagaggaggccagagggaaagcccaggccgctctg
gacaaagccacagccacaaagaaccaggtggagcgctccaacaacgacctgagagacctc
atcaagcagatcagagacttcctgacgcaggaaggcgccgaccccgacagcatcgaggcc
gtggcgaaccgcgtgctggagctctccatccccgcctcgccgctccagatccgccatctg
gccgacgagatcaaggagcgagtgcgcagcctctccaacgtggacgccatcctgcggcag
acgcagggcgacgtgcgcgaggcggagcggctgctgctggacgctaagagggccaggcac
agcgccgagggcgtgaaggccacggcggagacggtgaggcgggcgctgctggacgctcag
gcggctcagacgtcggcggagaaggccatcggcagagccacggccgacatcggggagacg
gaggcccgactggtgcagattgagtctgaaacctccaacagtgagaaggacctgagcgag
gccatggaccgcctgggcacgctgggccgggaggtcgccgccctgcagaccaaacgggcc
aacaacagcatggcagcggcccgcgctgaggagacggccaccatggcacgagacaaggcc
aacgaagccaagcagattctagacggccagctgacggataaataccacgaggtgcagcaa
cgagtcgacacgaaggccaaagctgtgcaggaggccaagaaaagagccgagagcctccga
gaggaagctaaggaactcctgagagacgcccagaacaagctgcaccggctagcagagctg
gagaagaactacgaggagaaccagaagcatctggagggtaaagcgcgtcagctggacggc
ctggaggacaagatgaaatccatcctgagtgacatcaacaagcagatccagatctacaac
acgtgccagtag
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integrated database retrieval system
