KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130199542
Entry
130199542         CDS       T09868                                 
Symbol
ddx19a
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
  KO
K18655  ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013  Nucleocytoplasmic transport
pswi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130199542 (ddx19a)
   03015 mRNA surveillance pathway
    130199542 (ddx19a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pswi03019]
    130199542 (ddx19a)
Enzymes [BR:pswi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     130199542 (ddx19a)
Messenger RNA biogenesis [BR:pswi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     130199542 (ddx19a)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30
Other DBs
NCBI-GeneID: 130199542
NCBI-ProteinID: XP_056279110
LinkDB
Position
9:18482194..18488037
AA seq 488 aa
MSNDSWAVAVDVQEATIPSIQADFSKKVPQVVLNIRRDINGDLINSGDNVVQETYENVEG
DSVPMAEQSLLNKLLRRDLVVNRNRVEVLQRDPTSPLFSVKTFEQLRLTPELLRGVYDMG
FNRPSKIQENALPMMLAEPHQNLIAQSQSGTGKTAAFSLAILSHVNPENKWTQCLCVAPT
YELALQTGRVIEQMGKFCPDVKLAYGIRGNRMVRGVKLQEQIVIGTPGTVLDWCTKYKLI
DPKKITMFVFDEADLMIATQGHRDQSVRIHRQLTKDCQMLLFSATFEESVLKFAQHVVSD
PNIIKLKREEETLDNIKQFYVICQAQEDKFTSLCNLYGVLTIAQAMIFCHTRRMASWLSS
KLISEGHQVALLSGELEVRQRAAIIERFRHGKEKVLVTTNVCSRGIDVEQVSLVVNFDLP
VDREGKADNETYLHRIGRTGRFGRRGFAVNMVDSDHSMDIIKQIELHFDRKITELDTNNL
EEMEKLTI
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgtccaacgactcgtgggcagttgctgtcgatgttcaggaagctacaattccatccata
caggcggacttctcaaagaaagttccccaagtggtccttaacataagacgagacataaat
ggtgacttaataaatagtggggacaacgttgtgcaggagacttatgaaaatgtcgagggg
gacagcgtacccatggctgaacagtcccttttgaataaactgctccgccgcgatctggtc
gtgaacagaaaccgggtggaggtcctgcagcgggaccccacttctcctctgttctccgtg
aagactttcgagcagttgagactaacacctgaactgctgaggggcgtgtacgacatggga
ttcaacaggccatcaaagattcaggagaacgctcttcccatgatgttggcagagccacat
cagaatctgatcgcccagtcacagtctggcacgggtaaaactgctgctttttctctggcc
atcctcagccatgtaaacccagaaaataagtggactcagtgcctttgcgtcgcaccaaca
tacgagctcgctctgcaaactggtcgagtaatcgagcaaatggggaaattttgcccagat
gtcaaactggcctacggcattcgaggaaaccgaatggtccgaggcgtcaagttgcaggaa
cagattgtcattggaacaccaggcacagtcctggactggtgcaccaagtacaagctcatt
gaccccaagaagattacgatgtttgtgtttgacgaggctgatttgatgatcgccacacaa
ggtcatcgtgaccaaagcgtacggatccacagacagctgacaaaggactgccagatgctc
cttttctctgcaacctttgaggagtctgtgttgaagtttgctcagcatgtggtttctgat
cctaatatcatcaagctgaagcgcgaagaggagacgctggacaacatcaaacagttctat
gtgatctgtcaggcgcaggaggacaagttcacatcgctctgtaatctctatggggtcctg
accattgcacaggccatgatcttctgccatactcgcagaatggcttcttggctgtcttcc
aagctgatctcagaggggcatcaggtggcgttgttgagtggggagctggaagtgaggcag
agagcggccatcattgaacgcttcaggcatggcaaggagaaagtacttgtgacgacaaac
gtgtgctccagaggtatcgatgtggaacaagtgtcgcttgtggtcaactttgacctccca
gtggacagggaagggaaggctgacaatgagacgtaccttcaccggattggccgcacagga
cgctttggcagaagaggattcgcggtcaatatggttgacagcgaccacagcatggatatc
atcaaacaaatcgagctgcatttcgacaggaaaatcaccgaacttgacactaataatctc
gaagaaatggaaaagctgactatctga

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