Pseudoliparis swirei (Mariana hadal snailfish): 130199561
Help
Entry
130199561 CDS
T09868
Symbol
scube3
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 3 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130199561 (scube3)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
130199561 (scube3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
EGF_CA
Ephrin_rec_like
EGF_3
CUB
EGF
hEGF
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
130199561
NCBI-ProteinID:
XP_056279155
LinkDB
All DBs
Position
9:22332225..22409354
Genome browser
AA seq
1015 aa
AA seq
DB search
MYLHALIRASLGFVGFCLVAFVQQSASGSKTPQDVDECAEALDNCSIDAICQNTLKSYKC
ICKSGYKGDGKHCEDVDECASEYNGGCVHECINIPGNYRCTCYDGFRLAHDGHNCLDVDE
CSEGNGGCQQICVNMMGSYECRCREGFLLSDNQHTCIQRPKVQSENSKDRPTCMDKNHGC
AHICRETQKGGIACECRPGFQLTRNMKECKLTCNYGNGGCQHICEETDHVPKCSCHMKFV
LHSDGKTCVGERSVQSQAAQLLFPNETCAVNNGGCDSTCHDSVTGVRCSCPVGFNLQPDR
KTCKDIDECRLNNGGCDHVCRNTVGSFECSCKKGYKLLTNERTCQDIDECSFDRTCDHLC
INSAGSFQCLCHKGYILYGLAHCGDIDECSINHGGCKSGCINSLGSYECTCPPGSKLHWN
RKDCVELMRCPLGLMAPKATLTCSKTGKKESCSLTCASKAHYLAESDNSYSVSCGVPIFR
GKSLSRHNSSSSQSCIEALTPPVKQTASFKIKNAKCHLHPKLTGRTEDRGRTLGPGGGQP
CSNCLVTFVNLKCDSSKKAKGRRARNPSNKEVTRITLELEAEVKPGDTTGSCNLSCLRQR
MEKQVKTYLKALKKSINQERFLIRVAGLEYEVAQKLPQATPSQENCGPGWERESGRCVRC
LSGSYYHGEQERCVQCPPGTFQEKEGQLACDLCPGSDGHGPVGARNISSCAGQCSTGSFS
NDGFKPCQSCPNGSYQPDLGRTLCFPCGGGLGTKREGASSFHDCEVKVQCSPGHYYNTTV
HRCIRCPVGTYQTEFRQNYCISCPGNTTTDFDGATSVSQCKNRMCGGEMGEFMGYIESPN
YPGNYPANVECIWNINPPSKRKILIVVPEIFLPSEDECGDVLVMRKNWSATSITTYETCQ
TYERPIAFTARSRRLWINFKSNEANSARGFQIPYVTYDEDYEQLVEDIVRDGRLYASENH
QEILKDKKLIKTLFDVLAHPNNYFKYTTRESNEMLPRSFIRLISSKVSAFLRPYK
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgcacgctttgatacgcgcgagcctgggatttgtaggtttctgcttggtcgcc
tttgtccaacagtcggcttcaggaagtaaaacccctcaagacgtggacgagtgcgcggag
gcgctcgacaactgcagcatcgacgccatctgccagaacaccctgaagtcgtacaagtgc
atctgcaagtcgggctacaaaggggacggcaaacattgcgaagatgtcgacgagtgtgca
tctgaatacaacggcggttgcgtccacgagtgcatcaacatcccgggaaattacaggtgc
acatgctatgatggcttccgcttggcacatgatgggcacaattgtctcgatgtggatgag
tgctcagaaggcaacggcggatgccagcagatctgtgtcaacatgatgggcagctacgag
tgccgctgcagagaaggattcctcctgagcgacaaccagcatacctgtatccaaaggcct
aaagtgcaatcagaaaactcaaaggacagacccacttgcatggacaagaatcacggatgt
gcacacatctgccgggaaacgcagaagggtggcatcgcctgcgagtgtcggcctggattc
cagctcacgcgcaacatgaaggagtgcaaattgacatgtaactacggtaacgggggttgc
cagcacatctgcgaggagacggaccacgtccccaagtgttcgtgccacatgaagtttgtc
ctgcacagcgatggaaagacttgtgtaggggagaggagtgtccagtcccaggcagcccaa
ctgctgttccccaatgagacctgtgcagtgaacaacggcggctgcgacagcacatgccac
gattcagtgacgggggtccgctgcagctgccccgtcggcttcaatctgcagccggaccgc
aagacctgcaaagacatcgacgagtgccgtctgaacaacggggggtgtgaccacgtgtgc
cgaaacacggtgggcagcttcgagtgcagctgcaagaaaggctacaagctgctgaccaat
gagaggacatgtcaagacatcgacgagtgctcttttgatcgcacctgtgaccacctctgc
atcaactccgccggaagtttccagtgcctctgtcataaaggctacatcctctacggcctg
gcgcactgcggggatattgatgagtgcagcataaaccacggaggttgtaaatccggctgc
atcaactctctggggagttacgagtgtacctgtccaccagggtccaagctgcactggaac
aggaaggactgtgtcgagttgatgagatgtcctcttggactgatggcaccaaaggccacg
ctgacctgtagcaagacgggcaagaaagagagctgctctcttacctgtgcctcgaaggct
cactatctggcagagtctgataacagctactcggtcagctgtggggtccccatcttcaga
gggaagtccctgtccaggcacaactccagcagcagtcagagctgcatagaggcgttgacc
cccccggtgaagcagacggcttctttcaagattaaaaacgccaaatgtcacctgcacccg
aagctgaccggcaggacggaggacagaggacggaccctcggaccaggaggggggcagccc
tgcagcaactgcctggtgaccttcgttaacctcaaatgtgactcctctaagaaagccaaa
gggcggcgtgcccgcaacccctcgaataaagaggtgacgcgcattactctggagctggaa
gctgaggtcaaacccggagacacgacaggaagttgcaatctcagctgcctgaggcagcgc
atggagaagcaggtgaagacgtacctcaaggcgctgaagaagtccatcaaccaggagcgc
ttcctgatccgagtggccggcttggagtacgaggtggcccagaagcttccccaggccacg
cccagtcaggagaactgcggcccgggctgggagagggagagcgggcgatgtgtcagatgc
ttgtcggggtcgtactaccacggtgagcaggagcgctgtgtccagtgtccacctggcact
ttccaggagaaggaggggcagctggcctgtgacctttgccccggcagtgacggccacggg
cctgtcggggcacgaaacatctcctcctgtgcaggccagtgttcaacgggctccttctcc
aacgacgggttcaaaccctgccagtcgtgccctaatggttcctaccaaccggatttgggg
cggaccctgtgcttcccgtgtggcggaggactgggcaccaagcgggaaggtgccagctcc
ttccacgattgcgaagtcaaagttcagtgttctccaggtcattactacaacaccacagtc
caccggtgtatccgctgcccagtggggacgtatcagacagagttcaggcagaactactgt
atctcctgccccgggaacaccaccactgatttcgatggtgccacaagtgtctcgcagtgc
aagaacaggatgtgcggcggcgagatgggcgagttcatgggttacatcgagtcgcccaac
tatcccgggaattacccggcgaatgtcgagtgcatctggaacatcaacccgcccagcaag
cgcaaaatcctaattgtggtgccggagatcttcctgccctcggaggacgagtgcggagat
gtgctggtgatgaggaagaactggtcggccacgtccatcaccacctacgagacgtgccag
acgtacgagcggcccatcgccttcaccgctcgctccaggcgcctctggatcaacttcaag
tccaacgaagcgaacagcgccagaggcttccagatcccctacgttacttacgatgaggac
tatgaacagctggtagaggacatagtgcgagatggaagactctacgcctcggaaaatcac
caagagatcctcaaggataaaaaactgattaagactctttttgacgtgctggctcaccca
aacaactacttcaagtacaccactcgggagtccaacgagatgctccctcgctccttcatc
cgcctcatcagcagcaaagtgtccgcgttcctgcggccatacaagtaa
DBGET
integrated database retrieval system
