Pseudoliparis swirei (Mariana hadal snailfish): 130199572
Help
Entry
130199572 CDS
T09868
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130199572 (rbm39b)
Spliceosome [BR:
pswi03041
]
Common components
Common spliceosomal components
General mRNP proteins
130199572 (rbm39b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
130199572
NCBI-ProteinID:
XP_056279172
LinkDB
All DBs
Position
9:26846219..26855492
Genome browser
AA seq
512 aa
AA seq
DB search
MADDFEVEAMLEAPFRKDEIKSSHANGHDDQHKKKRRSKSRSPGSRKRRSRSKDKKKSKK
RSKSRERKRTRSRERKRSGSRSKERSGRYRARKSPIRKRSKSRSPFKKEKSPIRNFEDAI
GPFNKIRDLSSRQPIDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRMISD
RNSRRSKGIAYIEFVESSSVPLAIGLTGQRLLAVPIIVQASQAEKNRAAAAANNLQKGSS
GPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKA
LEQLNGFELAGRPMKVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGT
GLKIPPAAQQALQMTGAIPFGNMSGSSVHSNQSHALNLPSQPLATHCLQLSNLFNPQAEN
DPSWAAEIQDDVIEECNKHGGIVHIYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWFAG
KMITAAYVPLPTYHNLFPDSVTAKQLLMPTRR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgaagtggaggccatgctggaggctccattcagaaaggatgagatc
aagtcctctcatgcaaatggacacgacgaccaacacaagaaaaagagaaggagcaagagc
cggagcccgggctccagaaagaggaggagccggagcaaagacaaaaagaagagcaagaag
aggagcaagagccgcgagaggaagaggacccgcagccgagagaggaagaggagcggctcg
cggagcaaggagcgctccgggcgctacagagctcgcaagagccccatccggaaacgttca
aaaagtcggagccccttcaaaaaggagaagagtcccatcagaaactttgaagatgccatc
ggaccatttaacaaaatacgagatctctcctccaggcagcccattgataacctgacgccg
gaggagcgagacgcccgcaccgtgttctgcatgcagctcgccgccaggatccgagctcga
gacctggaggacttcttctccgctgtggggaaggtgagggacgtgaggatgatctcggac
agaaactcccggaggtcaaagggcatcgcgtacatcgagttcgtggagtcgtcctccgtg
ccgctcgccatcgggctgacgggccagcggctcctcgccgtgcccatcatcgtgcaggcc
tctcaggccgagaagaaccgggccgccgccgccgccaacaacctgcagaagggcagctcg
ggccccatgaggctctacgtcggctcgctgcacttcaacatcaccgaggagatgctgagg
ggcatcttcgagccctttgggaagattgagggaatccagctgatgatggacagcgagacc
gggcgctccaaaggctacggcttcatatcgtttgcggacgcagagtgtgccaagaaggct
ctggagcagctgaacggcttcgagctggcgggccggcccatgaaggtcggccacgtgacg
gagcgttccgattcgtcgacggcgagctcgttcctggacaacgacgagctggagcgcacc
ggcatcgacctcggcaccacgggccgcctgcagctcatggcccggctggccgagggaacc
ggcctgaagatcccccccgccgcccagcaggcgctgcagatgaccggcgccatccccttc
gggaacatgtccggttcttcagttcactctaatcaaagccatgcgttgaacctcccgtcc
cagccgctggccactcactgcctgcagctgtccaacctgttcaacccacaagcggagaac
gaccccagctgggccgcggagatccaggacgacgtcatcgaggaatgtaacaaacacgga
ggaatcgtccacatctacgtggacaagaactctgcccagggcaacgtgtacgtgaagtgt
ccctcgatcccggcggcgatggccaccgtgaacgcgctccacggacgctggtttgcaggc
aagatgatcacggccgcctacgtgccgctgccgacctatcacaacctcttccccgactcg
gtgacggcgaagcagctgctgatgccgacgcgccgatag
DBGET
integrated database retrieval system
