Pseudoliparis swirei (Mariana hadal snailfish): 130199573
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Entry
130199573 CDS
T09868
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130199573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130199573
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130199573
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130199573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_10
zf-C3HC4_4
zf-RING_11
zf-rbx1
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
Baculo_IE-1
Prok-RING_4
zf-C3HC4_5
DUF1272
OTT_1508_deam
Motif
Other DBs
NCBI-GeneID:
130199573
NCBI-ProteinID:
XP_056279184
LinkDB
All DBs
Position
9:13072017..13074719
Genome browser
AA seq
194 aa
AA seq
DB search
MENIRVRKSTNDCAICLETIQEKKTLKCSHSFCSACIDSVFKLKPACPLCNSYHGEYTGT
QPEGTMTVTHSWQRLPGFEHCGTIVIQYSFPAGTQGPEHPNPGVRYSSTSRTAFLPASED
GEKVLKLLRKAFDRRVTFTIGQSVTTGLNNVITWNDIHHKTNMAGGPQCFGYPDPEYLFR
VQEELRLKGVTQDD
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacataagagtccgtaaaagtacgaacgactgcgccatttgcttggaaacaatt
caggagaagaagacattgaagtgctctcactccttctgctcggcgtgcatcgactcggtg
ttcaagcttaaacccgcttgtccgctatgcaacagctaccatggagagtacacggggacc
cagcccgagggcacgatgacggtgacccacagctggcagcgcctgcctggcttcgagcac
tgcggaaccattgtcatacagtacagttttcctgcagggacgcaagggcctgaacaccca
aaccctggggtgaggtacagcagcacctctcgtactgccttcctgccagccagcgaggat
ggtgaaaaagtcctgaagctgctgaggaaagccttcgacaggagagtcaccttcaccatc
ggacaatctgtcaccacaggcctcaacaacgtcatcacctggaacgacattcaccacaag
accaacatggctggtggtccacaatgttttggatatccagatccagaatatttgttcagg
gttcaagaggagcttcgtcttaaaggagtaacacaggatgactga
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