Pseudoliparis swirei (Mariana hadal snailfish): 130199574
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Entry
130199574 CDS
T09868
Symbol
hoxc11a
Name
(RefSeq) homeobox protein Hox-C11a
KO
K09296
homeobox protein HoxC/D11
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130199574 (hoxc11a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130199574 (hoxc11a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3528
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130199574
NCBI-ProteinID:
XP_056279185
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All DBs
Position
9:14210888..14214145
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AA seq
312 aa
AA seq
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MFNSVNLGNFCSQTRKDRTSEFGDRTGCASNIYLPSCTYYVPEFSAVSSFLPQGPSRQIS
YPYSTNLSQVQPVREVSYGLDPASKWHHRSNYASCYSGEDLVHRDCLPPSTMTEMLMKNE
SVYSHHHHHHTHPGSNHPSTGFYSGVGKNCVLPQGFDRFFETSYCSSTDNQSDSCLQKSE
GGKLESKSPEQQQPVAGAPEQEKEPEDEGEHTNSGSCTSSSATTKDGTANKSSHSTTPRT
RKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSR
DRLQYFSGNPLL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactcggtgaatctgggcaacttctgctcccagacgcgcaaagaccggacatcc
gagtttggagacaggacaggctgcgcgtccaacatctacctccccagctgcacctactac
gtccccgagttttctgccgtctcctcgtttcttccacagggcccgtcccggcaaatcagc
tacccctattccacaaatctgtctcaagtgcagccggtacgggaagtttcatacggcttg
gaccctgccagtaaatggcaccacagaagcaattatgcatcgtgctactcgggagaggat
ctggtgcatagggactgtcttccaccatccaccatgacggaaatgcttatgaagaacgag
agtgtgtacagccaccaccaccaccatcacacccatcccggctccaatcacccctccaca
ggtttttactccggcgtggggaaaaactgcgtccttccgcaaggtttcgaccgctttttc
gagacttcatactgcagcagcacggacaatcagtcagacagttgtttacaaaagagcgag
gggggaaagctggaaagcaagtccccggagcagcagcagcccgtagccggagctccggag
caggaaaaagagccagaagatgaaggggaacatacaaattcaggctcgtgcacttcttcc
tccgcaacaaccaaggacggcaccgccaacaagagcagccactcgactactcctcgcaca
cggaagaagaggtgcccatattccaagtttcagattcgggagctggagcgggaattcttc
tttaacgtttacatcaacaaggagaaaaggcttcagctttcgcgaatgttaaacctcacc
gatcgccaggttaaaatttggtttcagaatagaagaatgaaagagaagaagctgagcaga
gatcgcctccaatacttctctgggaaccccctattgtga
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