Pseudoliparis swirei (Mariana hadal snailfish): 130199588
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Entry
130199588 CDS
T09868
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130199588 (apex2)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
130199588 (apex2)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
130199588 (apex2)
BRITE hierarchy
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
130199588
NCBI-ProteinID:
XP_056279218
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Position
9:complement(20648418..20651631)
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AA seq
574 aa
AA seq
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MKIVTWNINGIRTFGGGIKKALDSLGADIICVQETKVTRDLLDERTAIVDGYNSYFSFSR
GRSGYSGVATYCKDSATPSAAEEGLTGLLTNHEGAVGSYGDQTEFCSEELRLLDNEGRAV
ITQHRIMCSEKEQTVTVINVYCPRADPEKPERKQFKLQFYKLLQSRAEAILKDGSHVIVL
GDVNTSHRQIDNCDPSDNDEFEENPGRKWLNAFLHSGGEEGEMREEEPNEESAVTSSETI
RGGKFVDTFRSFHPTRTSAFTCWCTLTGARQTNYGTRIDYVFADCLLAKEQFVAADIMPE
VEGSDHCPVWGHLSCSLLPSSKPPPLCTRFLPEFAGRQQKLSRFLVKVDRKSTPSEQRDE
LPGSQEEEERRENLNPPGAGNVSGKKRSLTSDSVAPKGKKTKTVKTSSNPKGSLLSFFKP
KLTNAVPSNEAPLKHCEKKLAEVTSSQNSRKASPVTSSAPEDTELVSDASLQLRTSSTTE
ESHKQMATKPSTPHPTAGHPEAKKGAPSVFWKSVFHGPPPPPTCKIHGEPCVLRTVKKEG
PNVGKQFFVCARPQGHASNPEARCNFFTWVEKGK
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgttacctggaacataaatggcatcaggactttcggaggcggcattaaaaag
gctcttgattcactgggcgctgacattatttgcgtccaagaaacaaaggtgacaagagac
ttgcttgatgagagaactgccatcgtagacggctacaactcatatttcagcttcagccga
gggcgaagcggctattcaggggttgccacttactgtaaagacagtgccactccatctgct
gcggaggagggtctcacaggtctgctgaccaaccacgaaggggctgttggaagctatggt
gaccagacagagttctgtagcgaggagctgcggcttttggacaatgaaggacgagccgtt
atcacacagcacagaatcatgtgctcggagaaagagcaaactgtcactgtcatcaatgta
tactgtcctcgggctgacccggaaaagccggagcgaaagcagttcaaactgcagttctac
aagttgcttcagagtcgggctgaagctatactgaaagatggaagccacgtgattgtttta
ggagatgtaaatacgtctcaccggcaaatagacaactgtgaccccagtgataatgatgaa
tttgaggaaaaccctgggaggaagtggctaaatgcctttttgcatagtggcggagaagaa
ggggaaatgagagaggaggaacccaatgaagaatcagcggtaacttcatcagagaccatc
cgcggtgggaaatttgtggatacgtttcgctctttccacccaacccgaaccagcgccttc
acatgctggtgcactctcactggagcgcggcagaccaactacggcacgcgcatcgactac
gtattcgctgactgcctcctcgccaaggagcagtttgtggcggcagacatcatgccagag
gtggaggggtcggaccactgccctgtgtgggggcacctgagctgctcgctcctgcccagc
tccaagccgcctcccctctgtacgcgcttcctgccagagtttgctggcaggcagcagaaa
ctctcccgcttccttgttaaagtggaccggaaatcaactccgtctgagcagagggatgaa
ttacctggatctcaagaagaggaggagaggagggagaatttaaacccgcccggagctgga
aacgtctcgggtaaaaaacggtcattaacatcagactctgttgccccaaaggggaaaaag
actaagactgtgaaaacctcttcaaacccaaaggggagccttctctcctttttcaaaccc
aaacttacaaatgctgtcccctctaatgaagcccctttaaagcactgtgaaaaaaaactc
gccgaagtaacttcctcacagaactcccgaaaagcatccccagtcacaagcagcgcacct
gaagatactgagcttgtctccgatgcttcactacagctgcgcaccagcagcaccacagag
gaaagtcataaacagatggcgactaagccttcaaccccacaccccactgcgggacacccg
gaagccaagaaaggggcaccctcagtgttctggaagtctgtttttcatggaccgccccca
ccgcccacctgtaagatccacggggaaccctgtgtgcttcgtactgtgaaaaaggagggg
ccaaacgtgggcaaacagttctttgtgtgtgcccgtcctcagggacatgcctccaatcct
gaggcccggtgtaattttttcacatgggttgaaaaggggaagtga
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