Pseudoliparis swirei (Mariana hadal snailfish): 130199619
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Entry
130199619 CDS
T09868
Symbol
trappc10
Name
(RefSeq) trafficking protein particle complex subunit 10 isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130199619 (trappc10)
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
130199619 (trappc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
TPR_12
TPR_14
TPR_2
TPR_7
Gryzun-like
TPR_19
TPR_10
TPR_8
Motif
Other DBs
NCBI-GeneID:
130199619
NCBI-ProteinID:
XP_056279270
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All DBs
Position
2:complement(20959637..20983355)
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AA seq
1267 aa
AA seq
DB search
MECQEEKPIIYTMENKPIVTCAGDQALFTSLYTSLAQQLPREPMEWRRTYGRAPKMIHLE
ANFVQFKEELLPKEGNKALLTFPFLHIYWTDCCDTEAYKSAAKEDMTRWQSSLRTHGSAD
WVIIVVETNDTKKKNKTNILPRSSIVDKIRSDFCNKQNDRCVVLSDPLKDSSRSQESWNS
LLLKLRTLLLMSFTKNLGRFEDDMRTLREKRTQPGWSFCEYFMVQEELAFVFEMLQQFED
ALVQYDELDALFTQYVLNFGAGDTANWLGSFCAPVRSWSGLLLRRPIDMEKRDGIQRGEA
SLLDLRSYLFSRQCTLLIFLLRPWEVTQRALELLHNCVQELRLLEVSVLEGALDCWVFLS
CLEVLHRIEGCCDPAQLAANCSHTVGLWAYATDKLKSLGELCGLVSEKGPTSEDLNRTVD
LLAGLGDERPETVSSLQSPYKKLKEALSSVEAFERHYLELSHAAMEMYSAIGRLRSARLV
GKSLAEFYMRKGDPERAETFLQEALKSYTSEGWSLPVTHTRKQIAECQKLLGRTEDYLQT
SALLAGDANLTMEERKHFCQEILTFAGKSEDQPPKATLSMAVFSQLTRLQFRPATASVHS
GAVLQAELTLRCLMPVSVHIQQLAVSVHFDLERAGTNGRSKGASRPANPGTVEFSQAPAA
AAWPSSAAGPPLELDEIQDRSPTDNSLNSTGLVCKNTHLVMRRHDGGGGSPTDTPACVGP
PAVTTVKDGGQMLRVKDVTLEPGNNIIVFTAPSGQPGTYTLRQLYATVGQVQFVLPHIYP
SVQYEVYSQEPQLTVEPLSEPLLAGLPQMVKFTLLTGHYAVKKGDALQLSNTDTMPVLPS
ASCTARITSPAAELVGESSLFIQSSEKVTSISLPATPPYHTLEFHLEVLCLIPHGGERPA
NERLTNGEVRHRPRSYSHPDVPMTAIDQRMSIDCPWSIYSTLLGLTFYIPFKTKHTLLSA
GNRKYIQVCVQNVSDVNFTLAQVQLAEKPQASLELQSLNTKSQQLLCSKHSVFCLWEVRW
KDDLPSCLQCVFSANFSPPKQDVATFKPFHYQFQLERVTTLYSVRAEILPAGGEQHCRSG
FLCGLEVCITRLTEPAEGEAAEDSKTDADGLKTTKLMYEVADSSSNWAVCGKSSGMVSMP
MAADATHKVQIEVMPLFAGHLPFPKIKVLKYLPHTAAVAIQPDPDSCVENDSLSLLDKAL
DDQGDTASIRSRGSVHSVGSGDQQQQRGVAMPRLEAFAAGQVFNHSHAQQVLVLPATDDH
IMEVNAT
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtcaagaggaaaaaccgatcatctatactatggagaacaagccgattgtgaca
tgtgctggagaccaggccttgttcacgtctctctatacctcattggcccagcaacttccc
agggagccaatggagtggaggaggacgtacggccgcgctcccaagatgatccacctggag
gccaacttcgtccagttcaaagaggagctgctgcccaaggagggcaacaaggcgctgctc
accttcccctttctccacatctactggaccgactgctgtgacacggaggcgtacaagagc
gcggcgaaggaggacatgacgcgctggcagagcagcctgcggacccacggctcggcggac
tgggtcatcatcgtcgtggagaccaacgacaccaagaagaagaacaagaccaacatcctg
ccgcgctcgtccatcgtggacaaaatccgcagcgacttttgcaacaagcagaacgacagg
tgtgtggtgctgtcggaccccctgaaggactcgtcccggtctcaggagtcctggaactcc
ctgctgctcaagctgcggaccctcctcctcatgtccttcaccaagaacctcggccgcttc
gaggacgacatgcgcacgctccgagagaagcgcacgcaacccggctggagcttctgcgaa
tacttcatggtccaggaggagttggcctttgttttcgagatgctgcagcagtttgaagat
gccctggtccagtacgatgagctcgacgctctttttactcaatacgtcctcaacttcggc
gctggagacacggccaactggctggggtcgttctgcgccccggtgcgcagctggagcggc
ttgctgctccggcggcccatcgacatggagaagagggacgggatccagcggggggaggcc
agcctgttggacctgcggagctacctgttctcccgccagtgcaccttgctcatcttcctc
ctgaggccctgggaggtcacccagcgggccctggagctgctgcacaactgtgtgcaggag
ctgcggctgctggaggtgtcggtgctggagggggcgctggactgctgggtgttcctcagc
tgcctggaggttctgcacaggatcgagggctgctgtgatccggcccagctggccgccaac
tgctcccacaccgtcgggctgtgggcctacgccaccgacaagctgaagtccctgggcgag
ctctgcggcctggtgtcagagaagggacccacgtccgaggacctgaacaggaccgtggac
ctgctggccgggctcggggacgagaggcccgagaccgtcagcagtctgcagagcccttac
aagaagctgaaggaagccttgtcgtccgtggaagcgtttgaaagacactatctggagctc
tcccacgccgccatggagatgtacagcgccatcggccggctgcggtccgcccgactggtg
gggaagagcctcgccgagttctacatgaggaagggggaccccgagcgggcggaaaccttc
ttacaggaagctctgaagtcgtacacatcggaggggtggagcctccccgtcacccacacc
aggaaacagatcgccgagtgtcagaagctgctgggcagaaccgaagactacttgcagacc
agcgccttgctggccggcgacgccaatctgaccatggaggagaggaagcacttttgccaa
gagattctgacgttcgccggcaagtctgaggatcagccacccaaagcgaccctcagcatg
gccgtcttctcgcagctcacgcggctccagttccggccggccacggcgtcggtgcactcc
ggcgccgtcctgcaggcggagctcacgctgcgctgcctgatgcccgtgtcggtgcacatc
cagcagctggccgtgagcgtccacttcgacctggagcgcgccggcaccaacgggcggtcc
aagggagcgtcgaggcccgccaacccgggcacggtggagttcagccaggcccccgcggcg
gcggcctggccctcctcggcggccggccccccgctggagctcgacgagatccaggaccgg
agccccacggacaattccctcaactccacgggactggtgtgcaagaacactcacctggtc
atgcggcgccacgacggcggcggcggctcgccgacggacacgcccgcctgcgtcggccct
cccgccgtgaccaccgtgaaggacggcgggcagatgctgagagtgaaggacgtgacgctg
gagcccgggaacaacatcatcgtgttcacagcaccgagcgggcagccgggtacctacacg
ctgcgccagctgtacgccaccgtgggtcaggtgcagtttgtgctgcctcacatctacccg
tcggtccagtatgaagtctattcccaggagccccagctcaccgtggagccgctctcagag
cccctgttggccggcctgccccagatggtgaagttcactctgctgacgggtcactacgcc
gtgaagaaaggcgacgccctgcagctcagcaacaccgacaccatgcccgtcctgccctcc
gccagctgcaccgcccgcatcaccagccccgccgccgagttggtgggcgagagctcgctg
ttcatccagtcgtcggagaaggtgaccagcatcagcctcccggccacgccgccctaccac
accctggagttccacctggaggtcctgtgcctcatcccgcacggcggcgagcggcccgcc
aacgagaggctcaccaacggggaggtccggcaccggccgcgcagctacagccaccccgac
gtgcccatgaccgccatcgaccagaggatgtccatcgactgtccgtggtccatctactcc
acgctgctcggcctcaccttctacatccccttcaagaccaaacacactctgctctccgct
gggaaccggaagtacatccaggtgtgtgtgcagaacgtgtcggacgtgaacttcacgctg
gcgcaggtgcagctggcggagaagccgcaagcgtcgctggagctgcagtccctcaacacc
aaaagtcaacagcttttgtgtagcaagcacagcgtgttctgcttgtgggaggtgaggtgg
aaggacgacctgccctcctgcctccagtgcgtcttctccgccaacttctctccacccaaa
caagacgtcgccaccttcaaacccttccactaccagttccagctggagagagtcacgacg
ttgtacagcgtgagagccgagatcctgcccgccggcggcgagcagcactgccgctccggc
ttcctgtgcggcctcgaggtttgcataacgcgactgaccgagcccgccgagggcgaggcg
gcggaggacagcaagaccgacgccgacggcctcaaaaccaccaaactcatgtatgaagtg
gccgacagcagcagtaactgggcggtgtgcgggaagagttctgggatggtgtccatgccc
atggcggcggacgccacccacaaggtgcagatcgaggtgatgcctctgttcgcgggtcac
ctccccttccccaagatcaaagtgctgaagtacctgcctcacacggcggcggtggccatc
caaccggaccccgacagctgcgtggagaacgacagcctctccctgctggacaaggcgctg
gacgaccagggcgacacggcgagcatccgcagccggggcagcgtgcactcggtgggcagc
ggcgaccagcagcagcagaggggcgtggccatgccgcgcctggaggccttcgccgccggg
caggtgttcaaccacagccacgcgcagcaggtcctggtgctgcccgccaccgacgaccac
atcatggaggtcaacgccacatga
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