Pseudoliparis swirei (Mariana hadal snailfish): 130199696
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Entry
130199696 CDS
T09868
Symbol
arhgef25a
Name
(RefSeq) rho guanine nucleotide exchange factor 25 isoform X1
KO
K20690
Rho guanine nucleotide exchange factor 25
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130199696 (arhgef25a)
Membrane trafficking [BR:
pswi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130199696 (arhgef25a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3-RhoG_link
PH
PH_19
PH_10
Motif
Other DBs
NCBI-GeneID:
130199696
NCBI-ProteinID:
XP_056279386
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Position
9:complement(13670411..13710080)
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AA seq
728 aa
AA seq
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MKALQKNQGRTDQMLGAMADMLTSVAMPNQQWLSEGVEADLPSSEQEKGPVQGQWEPEWE
QQATATEKPERRDRTDSYSAAGSEGSMSTSVASLPPQASGSSAPSSPGSRRSVSTLKKWL
TNPVRKLSVGATAKGERQVRKLEGKPPPLPSHGHSQDLGSPLRSEDTFIILPVTHRELEW
KDGLASPEDLSPAALQSPSYITDSLIGCTSLPNTQDTQSSCVLPDDSSSVLMDDTSSQWS
AVADTEEERRSALEKSMYVLKELIETEKHYVVDLGLIVEGYMATMHSKGIPEDMKGKDKI
VFGNIHQIFDWHKDYFLGELEKCIAEPERLAQLFIKHERRLHMYVVYCQNKPKSEHIVSE
YIETYFEELRRQLGHRLQLNDLLIKPVQRIMKYQLLLKDFLKYYTKAGMDIEELEKAVEV
MCFVPKRCNDMMNVGRLQDFEGKITAQGKLLQQDTFTVTEQDSGFLSRAKERRIFLFEQL
VIFSEPIDRKKGFSLPGYIFKNNIKVSSLGVEPSVEGDDARFVLTSRNPDASVVRFQLQA
PSPEIGRAWVNDVVQILESQRNFLNALQSPIEYQRRESKSNSLGRSMRPLLSAASALRPH
SSASIDRHKLPSLHSHNTSLPTLYLPSQGQGQGAIETYSLRDPTVVRPGPADSHTVSSSH
VQLGFPDPPNCQTVSNGLCTPTTQSTQQRAGEGCRRGQAADPGSQASLSGPLVGRRPSNL
AQLAEDDL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctctccagaagaatcagggacgcactgaccagatgttgggagccatggctgat
atgcttacttccgtggccatgcccaatcaacagtggctctcagagggggtcgaggcggac
ctcccatcaagcgagcaggagaaggggcctgtgcagggccagtgggagccagagtgggag
cagcaggccactgctacagaaaagccagagcggagagacagaacagactcttactcagca
gcaggcagtgagggcagcatgtccacctctgtggcgtcactccccccacaggcatcaggc
agctcggctccgagctccccgggctccaggcgctctgtgagcaccctgaagaagtggctc
acgaaccctgtccgcaaactcagcgtcggggccaccgccaaaggggagcgtcaagttcgc
aaacttgagggaaagcctccccctcttccgtcccatggccacagccaggatctgggcagc
cccctgaggtctgaagatactttcatcatcctgcctgtcacccacagagaactggagtgg
aaagatggcctggcaagccctgaagacctgtcaccagctgcactgcagtctcccagctac
ataactgactcgctgattggctgcacgtctctgccaaacacccaggacactcagtcctct
tgtgttttgccagatgacagcagctctgtcttgatggacgacacctccagccaatggtca
gctgtggccgacactgaggaggagaggaggagtgccttagagaaaagcatgtatgtactg
aaggagcttattgagacagagaagcactatgtggtggacttggggctcatagtggagggc
tacatggccacaatgcactctaaaggtataccggaggacatgaagggaaaagacaagatt
gtttttgggaacattcaccaaatatttgactggcataaagattacttcctgggagagctg
gagaagtgtatagcagagccagagaggctggctcagctcttcattaaacatgagaggcgt
ctgcatatgtatgttgtgtactgccagaacaagcccaagtcggaacatatcgtatcggag
tatattgagacttactttgaggagttgcggcggcagctgggccacagactgcagctcaac
gacctgctgatcaaacctgtgcagaggatcatgaagtaccagctgctgctcaaggacttc
ctgaagtattacaccaaagctgggatggacatagaggaattggagaaagcagtggaagtg
atgtgctttgtgccaaaacgctgcaatgacatgatgaatgtgggcagactacaagacttc
gaggggaagatcacagcccagggaaaactgctccagcaagacaccttcactgtgactgag
caggacagtggcttcttgtcccgagccaaggaaagacgcatcttcctgttcgagcagctg
gtcatcttcagtgagccaatcgacaggaagaaaggtttctctctccctggatacatcttt
aagaacaacatcaaggtgagcagcctgggggtggagcccagtgtggaaggggatgacgcc
cgctttgtgttgacatcccgcaaccccgatgcaagtgtggtgcgcttccagttgcaggct
ccctcccctgagatcggcagggcctgggttaatgatgtggttcagatcttggaaagccag
cgcaacttcctcaacgccttacagtcccctattgagtaccagcgacgagagagcaagtct
aatagcctgggtcgcagcatgaggccccttttgtctgctgccagtgccctgcggccacac
tcctcggcctctattgaccgtcataagctgccctcccttcactctcacaacacatccctg
cccacgctctacctgcccagccaaggccagggccaaggagccatcgagacatactcactg
cgcgaccccactgtggtccggccaggccctgctgactcccacactgtttcttcgtcacat
gtccaactgggcttccctgatccaccaaactgtcaaactgtgtcaaacgggctgtgcaca
cctaccacacaaagcacacagcagagagcaggagagggctgccgtaggggtcaggctgct
gatcctgggagccaggcttcactgtcgggccccttagttggacgacgccccagcaatctg
gctcagctagccgaggatgacctttga
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