Pseudoliparis swirei (Mariana hadal snailfish): 130199703
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Entry
130199703 CDS
T09868
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130199703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130199703
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
130199703
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
130199703
NCBI-ProteinID:
XP_056279396
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Position
9:complement(9437675..9439246)
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AA seq
197 aa
AA seq
DB search
MEIWAYKYRAEAEEKAAQIQLALRTEQERAELTAMAPTVVGQASYPKEHLAPVHKMRKPM
VEKLRRDRINTSIEQLKSLLSPEFVRQQPDSKQEKADILEMAVSYLRVWQHQKQKAGVTS
GLMAGGDGYSRCVQEAVSFLSHCDVQTQAHRRLLSHFQGLQASSHASCTLSPPGSPLHQI
SSGKRVSEASSALWRPW
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggagatttgggcgtataaatacagggcagaggcagaggagaaggcagctcagattcaa
ctggctcttcgaaccgagcaggaacgcgctgagctgacagctatggcacccactgtagtt
ggacaagcaagctatcctaaggaacacctggctcctgtgcataagatgagaaagccaatg
gtcgagaaactgcgcagagaccgcatcaacaccagcatcgagcagctgaaatctctgctc
agtcccgagttcgtcaggcagcagcccgactccaagcaggagaaggcggacatcttggag
atggccgtgtcctatctgagagtctggcagcatcagaagcagaaggccggcgtgacctct
ggcctgatggcgggcggcgacggctactctcgctgcgtgcaggaggcggtcagcttcctg
tcgcactgcgacgtccaaactcaggcccaccgacggctgctcagccacttccagggcctg
caggcgtccagccacgcttcctgcaccctctcccctcccggctcgccgctccatcagatc
agctccggcaagcgtgtgagcgaggccagcagcgccctgtggaggccctggtag
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