Pseudoliparis swirei (Mariana hadal snailfish): 130199719
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Entry
130199719 CDS
T09868
Symbol
ccnt1
Name
(RefSeq) cyclin-T1 isoform X1
KO
K15188
cyclin T
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130199719 (ccnt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130199719 (ccnt1)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
130199719 (ccnt1)
Brd4/P-TEFb complex
130199719 (ccnt1)
7SK RNP complex
130199719 (ccnt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
BUR2_N
Motif
Other DBs
NCBI-GeneID:
130199719
NCBI-ProteinID:
XP_056279415
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All DBs
Position
9:19657009..19666565
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AA seq
686 aa
AA seq
DB search
MAASFRSLPANCNNKWYYTREQIDNSPSRRAGLDPDKELSYRQQAANLLQDMGQRLNVSQ
LTINTAIVYMHRFYMVQSFTRFHRNVVSPAALFLAAKVEEQPRKLEHVIKVAHACLNPQD
PPPDVHSDAYLQQAQDLVILESIILQTLAFEITIDHPHTHVVKCTQLVRVVPASKDLAQT
SYFMATNSLHLTTFCLQYSPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLEL
LDELTHEFLQILEKTPSRLKRIRNWKAGGQTPKAKPKVQEDGDQRDTMMSMISMASSEST
VAGLMSLSAPPSASSSIGDKDGGEPGSAATWSGKGQAGCELQPNNEVHAPAKVSLSEYRA
KNADVLAAQKRKLENMDATVKRDYANAAQALIGQQQRKEKPQHHQQSSSSSSDMSNPSPI
ILKIPLEKERHERTSLKMRLPLAGGGGSGHSGGARGQEQDIKVRIRVPEKQRGSSGEEGK
SRDKHRERSNHHHHHYNHHHSSSTGASLSSKHKHSSGSSGTVGGSKKVPSDSSRTSSSSS
TASRKRTHSQDPTAGTHPVTKVSKSSRNPYQLPSLSSSSGQTLGHGSDILPVLGLPHHQG
SYLHSKGDKTDTNGHGAAGGAQSNEYQDTFEMLNSLLSAQGVQPSQPSMFNYRSQYGEYR
YSGGSRGNRPPPLPSEPPPPLPPLPK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcgtttcgttctctccctgcaaactgtaataacaaatggtactacacccga
gaacaaatcgacaacagcccatctcggcgagctggacttgatcccgacaaggagctgtcc
tacagacaacaggctgcgaacctgctgcaggatatgggacagcggctcaacgtgtctcaa
cttacaataaacacagccatcgtgtacatgcatcgattctacatggtccagtcgttcacc
agatttcacagaaatgtcgtttctcctgccgcacttttcctcgctgcaaaagtcgaggag
cagccccggaagctggaacatgttatcaaggtggcccatgcatgcctcaatcctcaggat
cctccaccagatgtacacagtgatgcctacctgcaacaagcccaagacctggtcattctt
gagagcataatactacagaccttggcttttgaaatcaccattgaccatcctcatactcat
gttgtcaagtgcactcagcttgtcagagttgttccagcgagtaaggatctggctcaaaca
tcatactttatggcaactaacagtctgcacctgaccacgttctgcctgcagtacagtccg
ccggttgtggcctgtgtgtgcatccaccttgcctgcaaatggtccaactgggagatcccc
gtgtctacggatggcaaacactggtgggagtacgttgatcccacagttaccctcgagctg
ctggatgagctcacacatgagttcctgcagattctggagaaaacacccagtcggttgaaa
cggattcgcaactggaaggctggaggtcagacaccaaaagccaagccaaaagttcaggag
gacggtgaccagagggacaccatgatgagcatgatctctatggcctcatcagagagcacc
gtggcaggcttgatgagcctctcggctccaccttccgcctcctcatccatcggtgacaag
gacgggggtgaacctggcagtgctgcgacttggagtggaaaaggtcaggctggatgtgag
ctgcagcccaacaacgaagtgcacgctccagctaaggtgtcgctgagtgagtaccgggcc
aagaatgcagacgtcctggctgcccagaaaaggaagctggagaacatggatgccaccgtg
aagagggactatgccaatgctgcccaggctctcattggtcagcagcagaggaaggagaag
ccgcagcatcaccagcagtccagctcatcctcgtctgacatgtccaacccgtcgccgatt
attctgaaaatccccctggagaaggagaggcatgagaggacctctctcaaaatgcgattg
cctcttgctgggggaggaggcagcgggcacagtggcggtgcccggggtcaggagcaggac
atcaaagttcgaatacgagtgcctgagaagcaaagaggaagctcaggagaggagggaaag
agcagggacaagcacagagaacggtctaaccaccaccatcaccactacaatcaccaccat
tcctcttctaccggtgcttcactctcctctaaacacaaacattcatctggttctagtggg
actgttggaggcagcaagaaagtccccagcgactcatctagaacgagctcttcatcctct
actgcgtcacgtaagaggacgcactcgcaagatcccacagcaggcactcaccctgtcact
aaagtcagcaagtcctctaggaatccctaccagctaccctccctgtcttcctcctctggg
caaactctcgggcacggctccgacattctccctgtcctgggtcttccccaccaccaaggg
agctatctccactccaaaggtgacaagacggacactaatgggcacggtgcagcaggggga
gcccagtcgaacgaataccaggacacgtttgaaatgctgaactcccttctgagcgcacag
ggggtccaaccatcccagccgtccatgtttaactacagatcccaatatggggaataccgg
tacagtggtggctccagagggaacaggcccccacccctcccttcagaaccgcctccccca
ctgccgccgttacccaaataa
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