Pseudoliparis swirei (Mariana hadal snailfish): 130199723
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Entry
130199723 CDS
T09868
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pswi01001
]
130199723
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130199723
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130199723
Protein kinases [BR:
pswi01001
]
Serine/threonine kinases: Other
Other
130199723
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130199723
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mahjong_helical
DCAF1_helical
DCAF1_N
DCAF1_4th
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
ARM_PUB
WD40
WD40_Gbeta
Beta-prop_WDR19_1st
ANAPC4_WD40
LisH
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
130199723
NCBI-ProteinID:
XP_056279423
LinkDB
All DBs
Position
9:27055677..27074658
Genome browser
AA seq
1552 aa
AA seq
DB search
MASASASVDSKAELTSLLEQWEREQQGGTQELVGILTKISELVEKETEEYHKADPDPFDD
RHPGRADPECVLGHLLKILFKNDDFMNTLVNSYVMTSREFPLNASACRLLQNIMPGLETA
VVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLHRM
RELQDKDAENKRDIKRPSPRKCLSEPLLPLDEETVDGGGFEETPFTPGRNGAEREEAEDG
VDDVPFSTAEPENELSFRLNSPHKAGGRANNSAVKTMMKPMSAPGALTHQGAPDGGGGSS
YLKRKAERESGRTLKQKLNFSLPDPDRNFSELSNSSWSETSPWVIGNNYHLFPLTPEIEQ
RLILQYLTPLGEYQELLAVFMQMGARELLMHYMDLKQTNDVQLTFEALKYLASLLLHKKF
AAEFVAHGGVQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERVCMLPHSILSDVVGYTLW
LLECSHASGCCHATMFFSISFSFRAVLELFDRQDGLRRLVNLISTLEILNPEDQGALLSD
DEIFSSRQTAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHSQPYYKAVGYSREQ
VVEMMEFLIEYGPLRLYWEPAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDIL
SILTVVPKTQLLLSEAVAVLDEGGSSVSTVGMSIVLAVAEGEVFVNDADIQKSALQVVIN
CVCAPDKRMSSIGKFIAGTPRRRLPQHSKASESVLTKMWNVVQSNNGIKVLLSLLTVKMP
ITDADQIRALACKALVGLSRSTSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVKFCK
FAAELIERISGKPLLIGTDVSLAWLQRASVVAKSRISFPEKELLLLIRNHLVAKGLHDTA
GALTKEAELPMACPSLVTAAPSFPTVPPPPPIASSPVATLPRTPRLANGVASRLAALASS
PGSSGNPQSRPSTSSQPAAASSASAGAAAAFPSTSATNGSPLIGRIIFSRERLAACAAAA
AAASCKKPRVLRQKSDHGAFSQSPAMKKQFDRHLPSPPALDNIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPVNFTSRHTRRVIYPKYGGVDGGCFDRHLIFSRFRPIS
VFREAEEDESGFMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPS
RDGSLLLTSASWSFPLSALWGMKSVFIMKHSFLGDHYVEFSKLSQDRVIGTKEHIARIYD
IQTGQVTLTLNNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRTAQAIHKFDKFNMNISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQADDEDDMMEM
QMKSPFGSSFRTFNATGYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLY
EVGRQRLAEEEEEDEEDQEDDDQEDDDDDEDSDDDVDDTDPLVAELEDEEEEEEEDDGND
EFSPSDEEVSRLLGGGGDDDSDNGGGGGNRTFLYDSSDNSDLEDDIILSLNQ
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcttctgccagcgtggactccaaggccgagctgacttctctgctggaacag
tgggagagggagcaacagggcggcacccaggagctggtcggcattctcacaaaaatctca
gagctggttgagaaggagacggaggagtaccacaaagcggaccccgacccttttgatgac
cgacacccagggagagccgacccagagtgcgtgttgggtcacctgctcaagatcctgttc
aagaacgatgacttcatgaacacgttggtgaatagctacgtgatgaccagcagagagttt
cccctcaacgcgtccgcttgtcgcctgctccagaacatcatgcccgggctggagacggcc
gtggtcttccaggaaaaggagggcatcgttgaacggctgttcaagtgggcccaggaggcc
gagcagcccctccgaatctacgccacgggcctgttggccggcgccatggagaaccaggac
atcgccgccaactacagggaggagaactccgttctggtgccgttgatgctgcatcggatg
cgcgagcttcaggataaggatgccgagaacaagcgcgacatcaagcgcccgagccccagg
aagtgtctgagcgagccgctgctgccgctggacgaggagaccgtggacggcggcggcttc
gaggagacgcccttcacgccggggaggaacggagcggagagggaggaggcggaggacggc
gtcgacgacgttcccttctcgaccgccgagcccgaaaacgagctctcgttccgactcaac
tccccccacaaggccggcggccgggccaacaactcggccgtcaaaaccatgatgaagccc
atgtccgccccgggcgccctgacgcaccagggcgcgccggacggcggcggcggtagcagc
tacctcaagaggaaggcggagagggagagcggcaggaccttgaagcagaagctcaatttc
tctctgccggaccccgacaggaacttcagcgagctgtccaacagcagctggtccgagacc
agcccctgggtgatcggcaacaattatcacctgttcccgctgaccccggagatcgagcag
aggctcatcctgcagtacctcacgcctctgggagagtatcaggagctgctggcggtcttc
atgcagatgggggctcgtgagctgctcatgcattacatggacctgaagcagaccaacgac
gtgcagctcacctttgaggctctcaagtacctggcgtctctgctactgcacaagaagttc
gctgcagagttcgtggctcacggcggcgtccagaagctgctggagatcccgcggccgtcc
atggcggccaccggcgtgtcgctgtgcctgtactacctcgcctacaaccaggacgccatg
gagcgggtgtgcatgctgccccactccatcctgtcggacgtggtcggctacacgctgtgg
ctgctggagtgctcgcacgcgtccggctgctgccacgccaccatgttcttctccatctcc
ttctccttccgcgccgtgctggagctctttgaccggcaggacgggctgcggcgcctcgtc
aacctgatcagcaccctggagatcctgaaccccgaggaccagggagcgctgctgagcgac
gacgagatcttctccagcaggcagacggccaagcacacctgcatggccctgcgcaggtac
ttcgaggcgcacctggccatcaaggtggagcaggtgaagcagtccctgcagcgcacagag
gggggcgcccccattcactcccaaccatactataaggcggtcggctacagccgcgagcag
gtggtggagatgatggagtttctgatcgagtacggtccactccggctgtactgggagccg
gcggaggtcttccacaagctgtcgtgcgtccagctcctcctgcagctcatttccatcgcc
tgcgactggaggacctactacggcaggagcgatacagtgcgctacgctctggacatcctg
agcatcctcacggtggttccaaagacccagctgctgttgtcggaggccgtcgccgtgctc
gacgagggcggatcctccgtttccaccgtcggaatgagcatcgtcctggcagtggcagag
ggagaggtattcgtgaacgatgccgacatccagaagtcggcgctgcaggtcgtcatcaac
tgcgtctgcgcgccggacaaacgcatgtccagcatcggcaagttcatcgccggcaccccc
cgccgccgcctgcctcagcacagcaaagccagcgagagcgtgctcaccaagatgtggaac
gtggtgcagtccaacaacggcatcaaggtgctgctgtccctgctgacggtgaagatgccg
ataaccgacgcggaccagatccgcgccctggcctgcaaggccctggtgggtctgtctcgc
tccacctcggtgcggcagatcatcagcaagctgccgctgttcagcagcggccacatccag
cagctgatgaaggagcccgtgctgcaggacaagcgcagcgagcacgtcaagttctgcaag
ttcgcggcggagctcatcgagcgcatctccggcaagccgctgctgatcggcaccgacgtg
tcgctggcgtggctgcagcgggcgagcgtggtcgccaagtcgcgcatctccttccccgag
aaggagctgctgctgctcatccgcaaccacctggtggccaagggcctccacgacacggcc
ggcgccctcaccaaggaggcggagctcccgatggcgtgtccgtctctcgtcaccgccgcc
ccgtcgttccccaccgtcccccctcccccgccgatcgcctcgtcccccgtcgccacgctg
ccccgcacgccgcggctggcgaacggcgtggcgtcgcggctcgccgccctggcgtccagc
ccgggatcctccggcaatccgcaatcgcgcccctccacgtcgtcgcagcccgccgccgct
tccagcgcttcagccggtgccgccgccgctttcccctccacgtccgccaccaacggctcc
ccgctcatcgggcgcatcatcttctcccgcgagcggctggccgcgtgcgccgccgccgct
gcggcggcgagctgcaagaagccccgcgtgctgcggcagaagtctgaccacggcgccttc
agccagagtcccgccatgaagaagcagttcgaccggcacctgccgtcgccgccggcgttg
gacaacatcatcacggagtacctgagggagcagcacgcgcgctgtaaaaaccccgtggcc
acgtgcccgccgttctccctcttcacgccgcaccagtgccccgagcccaaacagaggcgc
caggcgcccgtcaacttcacgtcccgccacacgcggagggtcatatacccgaaatacggc
ggcgtggacggcggctgcttcgacaggcatctcatcttcagcaggttccgccccatctcc
gtgttccgggaggccgaggaggacgagagcggcttcatgtgctgcgccttctcggcccgc
gagcgcttcctgatgctcggcacgtgcacggggcagctcaagctctacaacgtgttcacg
ggccaggaggaggccagctacagctgccacagctcggccatcacgcacctggagccctcg
cgggacggctcgctgctcctcacgtcggcctcttggagcttcccgctgtccgcgctgtgg
ggcatgaagtcggtcttcatcatgaagcattcttttctgggcgaccattacgtggagttc
agcaagctctcgcaggatcgcgtcatcggcaccaaggagcacatagcgcggatttatgac
atccaaacgggtcaggtaactctgaccctgaacaaccccgacctggccaacaactacaag
aggaactgcgccaccttcaacccgacggacgacctggtgctgaacgacggcgtgctgtgg
gacgtgcgcacggctcaggccatccacaagtttgacaagttcaacatgaacatcagcggc
gtgttccaccccaacggcctggaggtcatcgtgaacacggagatctgggacctgaggacc
ttccacctgctgcacacggtgccggctctggaccagtgccgcatcgtcttcaacaacaac
ggcaccgtcatctacggagcgatgcttcaggccgacgacgaagacgacatgatggagatg
cagatgaagagtccgttcggctcgtcgttcaggaccttcaacgccacgggctacaagcca
atcgccactattgatgtgaagaggaacatctttgacctttgcactgataccaaagactgc
tacctcgctgtgatcgagaaccaggactcggtgaacaccgacacggtgtgccggctgtac
gaagtcggccggcagagactagcggaggaagaggaggaggacgaggaggatcaggaggac
gacgaccaggaggacgatgacgacgacgaggattcggacgacgacgtcgacgacacggat
cccctcgtcgccgagctggaggacgaggaggaggaagaggaggaggacgacgggaacgac
gagttctcgccctccgacgaggaggtgtcgcgcctcctcgggggcggcggcgacgacgac
tccgataacggcggcggcggcggcaatcggaccttcctctacgacagctccgacaactct
gaccttgaggacgacatcatcttgtccctgaaccagtga
DBGET
integrated database retrieval system
