Pseudoliparis swirei (Mariana hadal snailfish): 130199744
Help
Entry
130199744 CDS
T09868
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04510
Focal adhesion
pswi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130199744 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130199744 (lamb2l)
BRITE hierarchy
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Syntaxin_2
ATG16
Nuf2_DHR10-like
F5_F8_type_C
Tropomyosin
Nsp1_C
Motif
Other DBs
NCBI-GeneID:
130199744
NCBI-ProteinID:
XP_056279455
LinkDB
All DBs
Position
9:1647711..1685046
Genome browser
AA seq
1837 aa
AA seq
DB search
MASLLGARLDAAWHGAGRRNTHGCTEGSCYPATGNLLIGTHTEHTRHLHLHLNTQEQYCI
VSHLQESDKCFECSSQHRYDARRHRHSHRIENAIYLMDAHGDTWWQSVNGQENVGIRLNL
EAEFHFTHLIMKFKTFRPAAMIIERSADFGRTWRPYRYFASNCTKTFPGVPASGLRHIND
VTCEERYSDIEPSTNGEVIYKVLDPAIHVEDPYSLDIQELLRITNLRINFTKLNTLGDDL
LDRRHDVLQKYYYALYELVVRGSCFCYGHGSECAPVPGVDARENGMIHGRCVCKHNTEGL
NCERCRHFHHDLPWRPAEVENPHTCRECSCNGHSTQCHFDMAVYLATGNLSGGVCDDCQH
NTMGRSCESCRPFYYQDPVRDMRDPRVCVDCDCDPVGSLEGGVCDGHTDLDMGMISGQCR
CKAHVKGTRCDDCKEGYYGLSQHDPLGCQPCNCDPRGIIMMGAPCDQISGDCSCKRYVTG
RYCNQCLPEYWGLSNDLAGCRQCDCDFGGAVNNRCVMDSGQCDCRRHLIGRQCSEVQPGF
FCAPLDFYKYEAEDAAGRSPGDAALPGKLRPQAETDCVQHLSNQLRRQRRHRRTSSSQQH
RAALRRIRQLQQTPDVRPVHREPALSHSVTWTGPGFARVKDGAGLVLTIDNVPYAMEYDI
MLRYEPESTEDWEAVVSVTSVHLPSSLRCGNLLPTEQLYTVSLPHRNRYIQMPRPFCFEP
SNRYVVAIRFQRHGVSHRHLTAFILIDSLVLIPKYTELPGLRGGEPEAEQRREEMLRYMC
LDSFMVTPTPVLADMCSKLICSISSIIHDGALPCQCDPQGSVSGECDAVGGRCRCKANVT
GRRCERCEPGSYGYGGRGCTACDCHPEGSSSHQCDPASGQCRCRPGATGRRCSACQPGQW
GFPSCSACRCNGHADVCDSLTGACGGCRDDTAGHQCERCADGFFGNPVLGSGERCRPCPC
PGNPGSDRFHAVSCDADLASDRIVCRCRPGYAGSRCDRCAPGQHGDPERPGGQCLPCGCN
GNIDPQDPGSCDPRTGRCLRCLFHTDGPACSHCLHGYYGNALAQDCRRCTCVTAGTAPSA
CSGGACHCDRLSGACSCRANVAGLNCDRCAADHWSYGRGAGCEPCGCDPAHAEGRHCNAF
TGQCRCRPGFGGRRCSECEALHWGGPQGPCEECNCHPVTSATPQCDRSTGACECREGAAG
VRCEECARGFSGEFPACERCHACFQLWDDAVCQIRRDLEHVQDAAQRLLRHGGATAPVGL
TRIRELEARLQEARRLVGAGDGDRVHQLIGQGVDDLRAEIALTDGRLMGVARELNATTEE
ERALRRRLSALERELRDANATVASKQSLLDDYLTSGFTDQFEKVKKSYQESLRAEERCNA
SVSGPLSPAEQSRDTRGVTEGLLDASRHNFLRALAAQNQTLSALQQNAHQLDRKLLHLSH
MVCGGHSNTSVNDSCPDSRCGGIGCLDDQGNAVCGGEGCNGTASAVAGTLQLARNATDGL
NAANEELQGVARKLKDIAALTLDVKNQAMTTLEKAQKKKEHFENNNKKLKDFIKKIRDFL
TEEGADPESIEKVALRVLAISLPVNRTTLDSMVLQIKQSLANLTDIQGVVNRTAEHIGRA
EELLAAAREAKGRAEGVNDAANATKRALDVSEDAIGKARAALEEARDNLNSTRNATAEVD
SRLTRLEDKQADVAMRLDNLSAEVEALKNKTEQNRRMAEDAEALAGNATRLASSLEQSLN
ETEERYRELQVKVDSLGGASGDLNHVNQRAKDIKKEAEDLFGKATKGIDQLKKLEKKFRS
NEQRMQKQRLELDELKENATVVRDEIRDQVQKYSNCV
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctcctcggcgcccggctcgacgcggcgtggcacggagccgggcgccggaac
actcacggctgcacggagggcagctgttacccggcaaccgggaacctcctgattggaaca
cacacagaacacacacgccacctccacctgcacctgaacacacaggagcagtactgcatc
gtcagccacctgcaggagtcagacaaatgcttcgagtgttcgtcgcagcatcgctacgat
gcgcgacgccaccgccacagccaccgcatcgagaacgccatctacctcatggacgcccac
ggggacacctggtggcagtcggtcaacggtcaggaaaacgtcggcatccgcctgaacctg
gaggccgagttccacttcacgcacctcatcatgaagttcaagacgttccggcccgccgcc
atgatcattgagcgctcggcggatttcgggcgcacgtggcgcccgtaccgctacttcgcc
tccaactgcaccaagacgttccccggcgtccccgccagcggactgcggcacatcaacgac
gtcacctgcgaggagcgctactccgacatcgaaccctcgaccaacggagaggtcatctac
aaggttctggacccggccatccacgtggaggacccgtacagcctggacatccaagagctg
ctgcgcatcaccaacctgcgcatcaacttcacgaagctcaacacgctgggcgacgacctt
ctggaccggcgccacgacgtgctgcagaagtattactacgccctgtacgagctggtggtg
cggggcagctgcttctgctacggccacggctccgagtgcgcccccgtgccgggggtggac
gcccgggagaacggcatgatccacggccgctgcgtgtgcaaacacaacacggaggggctg
aactgtgagcgctgccgacacttccaccacgacctgccgtggagaccggcggaggtggag
aacccacacacctgcagagagtgctcctgcaacggccactccacccagtgccacttcgac
atggcggtgtatttggccacgggcaacctgagcgggggggtgtgtgacgactgtcagcac
aacaccatggggcgcagctgtgagagctgcaggcccttctactaccaagaccccgtcagg
gacatgcgggaccccagggtctgcgtcgactgtgactgtgacccggtgggctctctggag
ggaggcgtgtgcgacggccacaccgacctggacatgggcatgatctccggccagtgtcgc
tgcaaagcccacgtcaaaggcacgcgctgcgacgactgcaaggagggctactacgggctg
agccagcacgacccgctgggctgccagccttgcaactgtgaccctcgcggcatcatcatg
atgggcgctccgtgcgaccagatcagcggcgactgctcctgcaaacgatacgtcaccggt
cgctactgcaaccagtgtctgccggagtactgggggttgagcaacgacctcgccggctgc
cgacagtgtgactgcgacttcggtggagccgtcaacaacaggtgcgtgatggacagcggc
cagtgcgactgcaggaggcatctgattggccgacagtgctccgaggtgcagcccgggttc
ttctgcgccccgctggacttctacaagtacgaggccgaggacgccgccggacgctcgcca
ggagacgccgcgctgccgggtaagctccgcccccaggcagagactgactgtgtgcagcac
ctcagtaaccagctgaggaggcagcgccgccaccgccggacctccagctcccagcagcac
cgagcggcgctgaggcggatccgccagctccaacagacgccggacgtgaggcccgtgcac
agggagccggcgctcagccactcggtgacgtggaccggtcccggcttcgcccgcgtcaaa
gacggcgctggcctggtgctgaccatcgacaacgtgccctacgccatggagtacgacatc
atgctccgctacgagcccgagtccacagaggactgggaggccgtcgtgagcgtgacctcg
gtgcacctgccctccagcctccgctgtgggaacctgctgcccaccgagcagctctacacc
gtcagcctgccccaccggaacagatatatccagatgccgcggccgttctgtttcgagccc
agtaaccgctacgtggtcgccatccggttccagcgccacggcgtgtcccacagacacctc
acggccttcatcctcatcgactcgctggttctgatccccaaatacaccgagttgccgggg
ttacggggcggcgagccggaggcggagcagcggcgcgaggagatgctccgctacatgtgt
ctggactccttcatggtcacgcccacgcccgtcctcgccgacatgtgctccaaactcatc
tgcagcatctcctccatcatccacgacggagcgctgccgtgccagtgtgaccctcagggc
tccgtgagcggtgagtgtgacgcggtgggcggccgctgccgctgcaaggccaacgtgacg
gggaggcgctgtgagcgctgtgagccgggaagctacggctacggggggcgcggctgcacc
gcctgcgactgccaccctgagggctcgtccagccaccagtgcgacccggcatcgggtcag
tgccggtgccggcccggcgccaccgggcggcgctgctcggcctgccagccgggccagtgg
ggcttccccagctgcagcgcctgccggtgcaacggccacgccgacgtctgcgactccctc
accggggcgtgcggcggctgcagggacgacacggccggacaccagtgtgagcggtgtgcg
gacgggttcttcgggaacccggtgctgggctcgggcgagcggtgccggccctgcccctgt
cccgggaaccccggctcggaccgcttccacgccgtctcctgtgacgccgacctcgcctcc
gaccggatcgtctgccgctgccggcccggctacgcggggtcccgctgcgaccgctgcgcc
cccggtcaacacggcgacccggagcgccccggggggcagtgcctgccgtgcggctgcaac
ggcaacatcgacccccaggaccccgggtcgtgtgacccgaggaccggccggtgcctccgg
tgcctgttccacacggacgggccggcctgcagccactgcctccacggttactacggcaac
gccttggcccaggactgcaggcgatgcacctgtgtgaccgccggcaccgcgccgtccgcc
tgcagcggcggcgcgtgtcactgcgaccggctgagcggcgcctgctcctgccgggccaac
gtggccggactcaactgcgaccgctgcgccgcggaccactggagctacggccgcggcgcc
ggctgcgagccgtgcggctgcgacccggcgcacgccgaggggcgccactgcaacgcgttc
accgggcagtgccgctgccggcccggcttcgggggccggcggtgcagcgagtgtgaggcg
ctgcactgggggggccctcaggggccctgtgaggagtgtaactgccaccctgtgacctcg
gcgaccccccagtgtgaccgctctacgggggcgtgcgagtgccgcgagggcgcggcgggc
gtgcgctgcgaggaatgcgcccgcggcttctcgggcgagttcccggcgtgcgagcgctgc
cacgcctgcttccagctgtgggacgacgccgtgtgccagatccgccgcgacctggagcac
gtccaggacgcggcgcagaggctcctgcggcacggcggcgcgacggcgccggtcgggctc
acgcgcatccgggagctggaggcgcggctgcaggaggcgcgccgcctggtcggcgccggg
gacggcgaccgggtccaccagctgatcgggcagggcgtcgatgacctcagagctgagatc
gccctgaccgacgggcgcctgatgggcgtcgcccgagagctcaacgccaccacagaagaa
gaacgggcgctgaggcgcagactgagcgccctggagagagagctgagggacgccaacgcc
acggtggcctccaagcagagcctgctggacgactacctcacctcggggttcacagaccag
tttgagaaggtgaagaagtcctaccaggagtctctgagggcggaggagaggtgcaacgcc
tcggtgtcgggtcccctgagcccggcggagcagtccagagacacgcggggcgtcaccgag
ggcctgctggacgccagcagacacaacttcctgcgggctctggccgcccagaaccagacg
ctcagcgcgctgcagcagaacgcccaccagctggaccggaagctgcttcacctcagccac
atggtgtgcggcggtcacagcaacaccagcgtcaacgacagttgcccggacagccggtgc
ggcggcatcggttgccttgacgaccagggcaacgccgtgtgcggaggagagggatgcaac
gggacggcgagcgccgtcgccggaacgctgcagctcgccaggaacgccacggacggcctg
aacgccgccaacgaggagctgcagggcgtggccagaaagctcaaggacatcgccgctctg
actctggacgtgaagaaccaggccatgaccacgctggagaaggcgcagaagaagaaggag
cactttgaaaacaacaacaagaagctgaaggacttcatcaagaagatcagagacttcctc
acagaggagggagccgacccggagagcatcgagaaggtggccctgcgggttctggccatc
agcctgccggtcaacaggaccacgctggactccatggtgctgcagatcaagcagagcctc
gccaacctcaccgacatccagggcgtggtcaaccggaccgcggagcacatcggccgagcc
gaggagctgctggccgcggcgcgggaagccaagggccgagcggagggcgtgaacgacgcg
gccaacgccaccaagcgggcgctggacgtgtccgaggacgccatcgggaaggcccgagcg
gcgctggaggaggcccgcgacaacctgaacagcaccaggaacgccacggcggaggtggac
tccaggctgacgcggctggaggacaagcaggcggacgtcgccatgcgcctggacaacctc
tccgcggaggtggaggccctgaagaacaagacggagcagaacaggcggatggcggaggac
gccgaggccctggccggcaacgccacgcggctggcgtcctcgctggagcagagcctcaac
gagacggaggagcggtaccgggagctgcaggtgaaggtggactctctgggcggagcctcc
ggagacctgaaccacgtcaaccagagagccaaggacatcaagaaggaggcggaggacctc
ttcggcaaagccaccaaagggatcgaccaactgaagaaattggagaagaagttccgcagc
aacgagcagcggatgcagaagcagcgcctggagctggacgagctgaaggagaacgccacc
gtggtgcgcgacgagatccgggaccaggtgcagaagtacagcaactgtgtgtga
DBGET
integrated database retrieval system
