Pseudoliparis swirei (Mariana hadal snailfish): 130199788
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Entry
130199788 CDS
T09868
Symbol
dcp1a
Name
(RefSeq) mRNA-decapping enzyme 1A isoform X1
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130199788 (dcp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130199788 (dcp1a)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130199788 (dcp1a)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130199788 (dcp1a)
mRNA degradation factors
5'-3' decay
Decapping complex
130199788 (dcp1a)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130199788 (dcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
130199788
NCBI-ProteinID:
XP_056279540
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All DBs
Position
9:9038746..9048884
Genome browser
AA seq
533 aa
AA seq
DB search
MLHRCQNHDFRGQRKLQLCPQKPVRVGATITSKMETVTAGQMMSLAALQRQDPYINKLLD
VTGQVALYNFNSKVNEWEKTDIEGTLFVYARSASPHHGFTIMNRLSTENLVEPINKDLEF
QLQDPFLLYRNGNLGIYSIWFYDKRDCHRIAQLMVKIVKQEAEHAQRNSPERAAPTRPNG
VAESRPIDILELLSKAKEEYQRAQAGEDVSAEPNGKAALNAAVQAHSKPQPEKSSHTMVK
QITVEELFGSSFTKDPPQNTTTASSDSDPSTAYLHNQSYPTPAHPNPLFPPHLSARDPGS
SQRHQVPGLLPAAYAMHPGPVFTSVVPRSDPQPQCSVSPLMVLPAGLEACAAPPVPAAPS
SAPPAYLGQEILDTLKAAVPSVNSDIHKPILAPNFLPSALFPPHSFQEPMGKHLLKHSSE
MNVFSQSPNLIKPMSAVPMSPGLAVPVLPISVLLSPSAFQQSTNKTAASAVPPAPVEPSH
ASAGALEPPQAACSKTHLQDTLIHLIKNDPDFLGAIHDAYLQSLSKDLSNMKL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatcgttgccagaaccatgatttccgaggacagcggaagttacaactgtgtcct
cagaaacccgtccgtgttggagcaacaatcacatccaagatggagaccgttaccgctgga
caaatgatgagcctggcagctctccagagacaagacccgtacattaacaaactgctcgat
gttaccggacaggtggctctctacaacttcaactccaaagtgaacgaatgggagaagacc
gacattgagggcaccctgtttgtttatgcgaggtctgcctcgcctcaccacggcttcacc
atcatgaaccgactgagcacggagaacctggtggagccgatcaacaaagacctggagttc
caactgcaggaccccttccttctctataggaacggcaacttgggtatctacagtatttgg
ttctatgacaagagggactgtcaccgcatcgctcagctgatggtcaagattgtcaaacaa
gaggcagagcacgcccagagaaattccccagaaagggcagcgccaacgaggcccaacggc
gtggcagaatcacggcccatcgacatcctggaactgctcagcaaagccaaggaggaatac
cagagagctcaggcaggtgaagatgtgtctgcagagccgaatgggaaagcagctctcaac
gccgccgtgcaggcgcacagcaaaccacaacctgagaagagctctcacacgatggtgaag
cagatcacagtcgaggagctctttggctcgtcttttaccaaggaccccccacagaacacc
accactgcttccagtgacagtgacccctccaccgcttacctccacaaccagtcgtatccc
acgccagcccacccaaacccactctttcctccccatctctcagcccgagaccccgggtca
agtcagcggcaccaagtccccggcctgctcccagctgcctacgcgatgcaccccggccct
gttttcacatcggtggtcccgaggtctgacccccaacctcagtgttcagtctcccctctt
atggtgcttccagctggcttagaggcgtgtgctgctccgccggttcccgcagctccatca
tcagctcctcctgcatatttaggtcaggagatactcgacactctgaaagcggcagtgccc
tctgtgaactcggacatccacaagcccatcctcgcacccaacttcctgccaagtgcgctg
ttcccaccccacagcttccaggagcccatgggcaaacaccttctgaagcacagcagtgag
atgaatgttttttctcagtctccaaacctgatcaaaccaatgtctgcggtccccatgagt
ccaggtcttgcggttccagttttgccgatctctgtgcttctctccccgagcgccttccag
cagtccaccaataagacggcagcgtcggcggtccccccggcccccgtcgagccctcccac
gcctctgcaggagctttagagcctccacaagcagcctgcagcaaaacacatcttcaggat
acgctgattcacctcattaagaacgacccagacttcctcggtgccattcatgatgcctac
ctgcagagtttgtccaaggacctcagcaacatgaagctatag
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