Pseudoliparis swirei (Mariana hadal snailfish): 130199844
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Entry
130199844 CDS
T09868
Symbol
nr1h5
Name
(RefSeq) nuclear receptor subfamily 1, group H, member 5
KO
K08538
farnesoid X receptor beta
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130199844 (nr1h5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pswi03310
]
130199844 (nr1h5)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130199844 (nr1h5)
Nuclear receptors [BR:
pswi03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
130199844 (nr1h5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130199844
NCBI-ProteinID:
XP_056279629
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Position
9:5154709..5168614
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AA seq
493 aa
AA seq
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MREWTELEMSFSAGGFLSASDGFCSTEQLQYYDMLADPLGYPLQDPDLQLLPCSQQQYSP
ANLSFSLYGSPPSSTSSPSSSSSSSQPCHPPYHYSPHCLEAPCDPSLEPHCGVLAQGFGL
GALPLGRRTRVVSGGKGRGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYQC
KSGGGCEMDMYMRRKCQDCRLKKCRAVGMLAECLLTEVQCQSKRLRKGGKVRGHKEEENT
DNKRVSSTSRLPGQAPSASLTRDQKYLVDRMVEAHQLYTAQDSSHCRLLEWSCAEEGGGV
SDAASSQLQRLLQFARMVPGFDLLDFPDQNSLLSISSLEVMFLLSAQQFSHNPTSPSPAL
QMFSMSSHNWLRNVASKENIHSGMMINSGGSEDLFGPVLNFFHSMAMLRVTEAEYALLTA
TALLCSDRASLQAASCVERMQELILDLLSRVCGAQAGAARGGPQRFGRLLGRLTELRTLR
HNYLLLTQRHLGH
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtggactgagttggagatgagcttttcggccggggggtttctctccgcctcg
gatggtttctgctccacagagcagctccagtattacgacatgctggcggaccctctgggc
tacccccttcaggaccctgacctgcagctgctcccttgcagccagcagcagtacagcccc
gccaacctgtcattctccctctacggctctccgccctcctccacctcctctccgtcctct
tcctcttcctcctcgcagccctgccatcctccgtaccactacagccctcattgcctggag
gccccctgtgaccccagcctggagccccactgcggggtcctggctcaggggttcggactg
ggcgcactgccgctggggcggaggacgcgggtggtgtcgggagggaagggcagaggtcag
gaggagctgtgtgtggtgtgtggagataaagcgtcggggtatcactacaacgctcttacc
tgtgagggatgcaaaggcttctttcgccgtagtgtgactaaaaaggctgtgtatcagtgt
aagagtggcggtggctgtgagatggacatgtacatgaggaggaagtgccaagactgccgg
ctgaagaagtgccgtgctgtggggatgctggctgagtgccttctgaccgaggtgcagtgc
cagtccaaacgactgaggaaaggcggtaaggtcagaggacacaaggaagaggagaacaca
gacaacaagagggtcagctctaccagcaggctacccgggcaggctccgtctgccagttta
acccgagaccagaagtacctcgtggaccggatggtggaggcccatcagctgtacacagca
caggacagcagccactgcaggttgcttgagtggtcgtgtgcagaagaaggggggggcgtg
tccgacgccgcgtcgtcacaactgcaacggctgctccagtttgccaggatggtgccgggg
ttcgacctcctggactttcccgaccagaactctctcttgtccatctcatcgctggaggtc
atgttcctgctctcagcacagcagttctcccacaacccaacgagccccagtccagccctg
cagatgttcagcatgtcatcacacaactggttgagaaatgtagcgtcaaaggaaaacatc
cacagtgggatgatgatcaattcaggtggaagtgaggatctcttcgggccggtgctcaac
ttcttccacagcatggcgatgctgcgagtgacggaggccgaatacgcgttgctcacggca
acagctctgctctgctcagaccgtgcgtccctacaggctgccagctgcgttgagagaatg
caggagctgatcctggacctgctgtccagggtgtgtggggcccaggccggagctgcgcga
gggggccctcagcgcttcggtcgcctgctgggccgcctgacagagctgcggacgcttcgc
cacaactacctcctgctgacgcagcggcatctcggacactga
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