| Entry |
|
|---|
| Symbol |
ythdf1
|
|---|
| Name |
(RefSeq) YTH domain-containing family protein 1 isoform X1
|
|---|
| KO |
| K20102 | YTH domain-containing family protein |
|
|---|
| Organism |
pswi Pseudoliparis swirei (Mariana hadal snailfish)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:pswi00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pswi03019]
130199880 (ythdf1)
Messenger RNA biogenesis [BR:pswi03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130199880 (ythdf1)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
9:complement(20188196..20193867)
|
|---|
| AA seq |
610 aa
MMSAASIDPQTTKGQDASKVFPVSVQNGSLHQKDAVHDNDFEPYLTNQSNQNNSYQSMTD
PYLSSYYAPSIGFPYPLSEAPWSTGGDPPIPYLTPYAPLSNGDHHFMHDTVFGQPGGLSS
SIYPHRFNFFPENPAFSAWGTSGSQGQQTQSSAYGGSYSYPPSSLGGTLVPDGQTGFHSD
TLSKAPGMNSLEQGMLGLKIGGDATASGMGVKNAGSLGGGSVAAAVATGNGGTPTGMPPP
KPTSWAAIAGKPAKLQQQKTKNKPGPPIAAGGLPPPPMKHNTDIDTWDNKGAVTKMAPPL
PPHHHHHHQQPQLHSHVPSLLPPLQQSIQSAQSLVQQMTMQGPPQHYQNHNSAPTPQTRW
IAPRNRNLCYGGGSLDSGGGGSSNGGFVGNGGGGAVPPEPGLESHPVLEKLRAAHSYNPK
EFDWSLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRGMNSKGPVYLLFSV
NGSGHFCGVAEMRSPVDYGTSAGVWAQDKWKGKFDVNWLFVKDVPNSQLRHIRLENNDNK
PVTNSRDTQEVPLEKAKQVLKIIAQYKHTTSLFDDFSHYEKKQEEEEVVKKSYEPAPIQS
RSRIDQDRQK |
|---|
| NT seq |
1833 nt +upstreamnt +downstreamnt
atgatgtctgccgctagtattgaccctcagacaacgaaaggacaagatgcaagcaaagtc
tttccagtgtccgtgcagaatggctccctgcaccagaaggacgccgttcatgacaatgac
tttgagccctatctcaccaaccagtctaatcagaataacagctatcagtccatgacagac
ccttacctgtccagctactatgccccctccattggttttccttaccctctcagtgaggct
ccttggtctacaggaggcgacccaccaattccctacctgacaccctatgcccccctcagc
aatggagaccatcatttcatgcacgacaccgtgtttgggcagccgggcggactcagcagc
agcatctatcctcacaggtttaactttttccccgagaacccggccttctcagcctggggc
accagtggttctcagggccagcagactcagagctccgcctatggggggagttacagctac
ccacccagctctctgggaggcaccctagtccctgatggtcagacgggtttccatagtgac
accctgagtaaggcaccaggtatgaacagccttgagcagggcatgctgggcctaaaaata
ggtggggatgcgactgcaagtggcatgggtgtgaagaacgccggctcccttggaggtggc
tctgtagctgcagccgttgccacgggcaacggcggcacaccaactggaatgccccctccg
aaaccgacatcgtgggccgctattgctggtaaacctgccaagctgcagcaacaaaagacc
aagaacaaacctggcccacccatagccgcaggaggtctgcctccaccccccatgaaacac
aacacggacattgatacttgggataataaaggggccgttacgaagatggcccctcctctg
cccccacaccaccaccaccaccaccaacagccccagcttcactcccacgttcccagtctc
ctgccccccctccagcagtccatccaatctgcccagtccctcgtgcagcagatgaccatg
cagggtcctccacagcattaccagaaccacaactccgctccgacgccccagacccgctgg
atagccccacgcaaccgcaacttgtgctacggcggcggcagcttggacagcggcggcggc
ggctcctctaacggtggcttcgttggcaacggtgggggcggggcggtgcctccggagcca
gggctggagtcccaccccgtgctggagaagctgcgggcggcccacagctacaaccccaag
gagtttgactggagcctgaagaacggccgcgtgttcatcatcaagagctactccgaggac
gacatccaccgctccatcaagtactccatctggtgcagcacggagcacggcaacaagcgc
ttggactccgccttcaggggcatgaactccaaaggtcccgtctacttgttgttcagtgtc
aacggcagcggccatttctgcggcgtggccgagatgcgctcgccggtggactacggcacc
agcgctggcgtttgggcgcaggacaagtggaaggggaagttcgatgtgaactggttgttt
gttaaggacgtgcctaatagccagctgcgccacatccgcctggagaacaatgacaacaag
cccgtcaccaactcgcgtgacactcaagaagtccctctggaaaaggccaagcaggtgctc
aagattatcgctcagtacaagcacaccacctccctcttcgatgacttttcccactatgag
aagaagcaggaggaggaggaggtggtgaaaaagagctatgagcctgcccccatacagagc
cgatcccgaatcgatcaggatcgccaaaagtaa |
|---|
