Pseudoliparis swirei (Mariana hadal snailfish): 130199885
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Entry
130199885 CDS
T09868
Name
(RefSeq) zinc finger and BTB domain-containing protein 39 isoform X1
KO
K10511
zinc finger and BTB domain-containing protein 39
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130199885
04121 Ubiquitin system [BR:
pswi04121
]
130199885
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
130199885
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
130199885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2_4
zf-C2H2
zf-H2C2_2
Phage_zn_bind_3
zf-met
zf-C2H2_ZNF462_1st
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
130199885
NCBI-ProteinID:
XP_056279694
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Position
9:19820437..19830703
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AA seq
874 aa
AA seq
DB search
MEVCLRGSDSSPLLLQLDSRAPGAAAGMRIQLQGPGHAASLLAQLNVCRQSRQYCDVFLQ
VGNRTFAAHRAVLACAGTYFRNLFARAPASSAAAVSLEFISPANFEKLLTFVYTGEILTD
LIDVGVLYELAERLGVSELVRACHATFPDLQTSASANCKPGSPGDLALNSSTVAAVSTGA
AASAASASSACSSAASCSSLSSPAAPTPAAAPSPLLQSRAAGADHEAHTGTLSLGLKEED
PQSHIGYGQSAADGPRPGGLSLLSSGHSRQCGGALTPGPVVQPKVEPGLEEEEGVREDGD
ADGRMVSQRAGRPPPQSSDAAPADSCSFPDSSARLGAEACAPTSSSGEPLGGLQAASVGG
GMVDVQRDGGLVFGKVEEERHALKGNGAAEGTEEEQWRRLADEIIELSDDENFMEEGDEE
DDDDELVYVENGDGGNSSSQVTGNMLPCKACGVLLPADPDAIGRHAETHLTELGLCRVCG
ASFPDRGAGAAHSLSHVGVQLFTCDMCHLQFCSQNKLLRHQRQTASSYTIPQVALTNGGQ
NLDPKLQCAVCAESLGADFSTVKDHLLSHVCPQSLICGVCHLPQLSLCSLLWHALAHLSL
PVFTCPHCARCFVERSMLDRHMTTHAEEAAAKEREQLALRAYRVGGVEEVHCFLCPQTFR
SASAFQYHLSLHTSESPGSLGGVRAQGWLGKHKAEQTLECLPSSSSQREAGSLVKMSNMG
LGLGMSFSVPDKFFQGALQSPPTGVLTNGNSGQDGGVGAAGVRGKWYRCRYCGKCFAHSG
EFTYHLRIHTGEKPYQCKVCQRFFRGRSTMICHLKTHAGALMYRCTVCGLFFSTLKMVSS
HMELHTDHLPPDFNIEQTFMYNDHSKEPLPNVDA
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggaagtttgcctccgaggttctgactcctctcctctgctcctgcagttggatagtcgc
gcaccaggagctgcagcagggatgaggatccagctgcagggtcccggccacgctgccagc
cttctcgctcagctcaacgtctgccgccagtcccgccagtactgcgatgtgttcctgcaa
gtcggcaaccgcacgttcgcggcgcaccgcgcggtgctcgcctgcgccgggacgtacttc
cgcaacctgttcgcccgcgctccggcctcgtccgcggccgccgtctctctggagttcatc
tccccggccaactttgagaagctgctgacgttcgtctacacgggggagatcttgaccgat
ctcatcgacgtcggcgtgctgtacgagctggccgagaggctgggcgtgagtgagctggtg
agggcctgccacgccaccttcccggacctgcagacctccgcgtctgcgaactgtaaaccg
gggagtcccggagacctcgccctgaactccagcacggtggccgccgtgtccacaggcgcc
gccgccagcgcggcttctgcctcgtccgcgtgctcctctgccgcctcctgctcgtctctg
tcctcgcccgccgccccgacccccgccgccgctccctcgccgctcctccaaagcagggcg
gccggggccgaccatgaagctcacaccgggactctgtctctgggcctcaaggaggaagac
ccgcagtctcacatcggctacgggcagtcggcggcagacggaccacgaccagggggactc
agccttttaagcagcggccattccagacagtgtggcggcgcgctgaccccggggcctgtc
gtccagccgaaggtcgagccggggctggaggaagaggaaggcgtccgtgaggacggagac
gcagatggacgaatggtttcccaacgcgcaggacgtcctccgcctcaaagcagcgacgcc
gcgccggccgactcctgctccttccccgactcctcggctcggcttggagccgaggcctgc
gcgccgacgtcctcctcgggagagcctctcggcggcctgcaggcggcgtcggtgggcggc
ggcatggtggacgtccagagggacggcgggctggtgtttggaaaggtggaggaggagaga
cacgctctgaaaggaaacggggccgcggagggaaccgaggaggagcagtggagacggctg
gcggatgagatcatcgagctgagcgacgacgagaacttcatggaggagggcgacgaagag
gacgacgacgacgagctggtgtacgtggagaacggagatggagggaactcgagcagccag
gtgactgggaacatgctgccgtgtaaagcctgcggcgtgcttctcccagcggacccggac
gccatcgggcggcacgccgagacccacctgacggagctggggctctgcagagtgtgcggg
gcctcgttcccggaccgcggcgccggcgccgcccactccctctcccacgtcggggtgcag
ctcttcacctgcgacatgtgccacttgcagttctgcagccaaaacaagctgctgcgccac
caacggcagacggcctccagctacacgataccacaggtggcgctgaccaacggcggccag
aacctcgaccccaagctgcagtgcgccgtgtgcgccgagagcctcggcgccgacttctcg
acggtcaaagaccacctgctgagccacgtgtgcccccagagcctgatctgcggcgtgtgt
cacctccctcagctctcgctgtgctccctgctgtggcacgccctcgcccacctgtctctg
cccgtcttcacctgcccgcactgcgcccgctgcttcgtcgagcgctccatgctggaccgg
cacatgacgacgcacgccgaggaggctgcggcgaaggagcgggagcagttggcgctgagg
gcttacagagtcgggggagtggaggaggtgcattgcttcctgtgcccgcagacgttccgc
tccgcctctgcctttcagtaccacctcagcctgcataccagcgagtccccggggagtctc
ggaggcgtcagggcccaaggctggctgggcaaacataaagccgagcagactctggagtgc
ctgccgtcttcctcctctcagcgggaggccggcagcctcgttaaaatgagcaacatgggt
ttggggctgggaatgagcttcagcgtgccagataagtttttccagggggcattacagagc
ccgcccactggggtcctgaccaacgggaactctgggcaggatgggggagtcggggcagca
ggcgtccgtgggaagtggtaccggtgtcgctactgcggtaaatgcttcgcccactcgggg
gagttcacctaccacctccgcatccacaccggggagaaaccctaccagtgcaaagtctgc
cagcgcttcttcagagggcgctccaccatgatctgccacctgaagacgcacgccggagcg
ctcatgtaccgctgcacggtctgcggccttttcttctccacgctgaaaatggtgtcgtcg
cacatggagctccacacggaccacctgcccccggacttcaacatcgagcagaccttcatg
tacaatgatcactcgaaggagccgctgcccaacgtggacgcctga
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