Pseudoliparis swirei (Mariana hadal snailfish): 130199905
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Entry
130199905 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130199905
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GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u5
PDZ_2
WW
Guanylate_kin
DUF6288
MAGI_u1
Motif
Other DBs
NCBI-GeneID:
130199905
NCBI-ProteinID:
XP_056279732
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All DBs
Position
9:complement(26730633..26788628)
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AA seq
1607 aa
AA seq
DB search
MSTVLLQRKNHWITTVNECLVGRDARGELRVELRGGAERGEFASVGRVAEEGLRDGRPRE
GELLLEVQGRPVAGLPLYDISSVMKGCDGPVRLKTVRQGHDLTKDLKLYLSRRVRRASAD
HRLQESIRANLYRHATPCTTRPPRDGEVPGVDYDFLSVEDFLKLEDSGTLLEIGTYDGNY
YGTPKPPRQPPGGGTLILGAAGRRRSESDDDMQDGRVAPGAHDDDHRDAEMNNSFTGNPS
DRDEGRGALRPYPARDNAPSCGLNNAAASTADSGQQTLAAEPQASPDEPQGPMPDNWEAA
YTESGELYFIDHNTKTTSWMDPRCRDKGPRPLEDCDDDEGIHTEELDTDLELPPGWERIE
DPVYGVYYVDHINRKTQYENPVVEARRRTILEQQPPPPPPPQPPEEWIEEHSEATPLANY
ASNHLETYRDPQGPPTLPPTLPPTLPPMPGGAKRGKPFFTRNPAELKGVFINTKLKKSRR
GFGFTVVGGDEPDEFLQIKSLVLDGPAAVDGKMETGDVIVSVNDVVVLGHTHAQVVKIFQ
SIPIGSTVDLALCRGYPLPFDPDDPNTSLVTSVAIVDKEPIIVNGQEAFHSPCGAGGPRP
RSPSAASEPASGGYSSDVVDMASSIATQPELITIHMEKGDKGFGFTIADSPTGGGQRVKQ
IVDYPRCRGLREADILVEVNKRNVQNMSHNQVVDLLSKCPRGSEVTMLVQRGVVQAKRSP
KLVQQLERKDSQSSSQLSVCSHRSSAHADSPGHPAAPAAMPGDAPTQPLPGLPHHQDPAD
AGALTLQKKPDPFKIWAQSRSMYESRLPDCQDQDIFLWRKDTGFGFRILGGNEAGEPIYI
GHIVKYGAADEDGRLRSGDELTCVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKSTG
HPGESTGQTEGGRASAPPHHSSQQASSSLEXGSDQGSQNSLNTVSSGSGSTSGIGSGGGG
GGGSAVAPASLQPYDVEIQRGENEGFGFVIVSSVSRPDAGTTFTGNACVAMPHKIGRIIE
GSPADRCGKLKVGDRILSVNCCSITNKSHSDIVNLIKEAGNTVSLRIIPGDESSNASLLT
NAEKIATITTTHTPQQTAESRNNSKSKGAPPPPPTHSQTAQDAEFYSVDLERDSKGFGFS
LRGGREYSMDLYVLRLAEDGAAVRNGKMRVGDEILEINGETTKNMKHSRAIELIKNGGRW
ARLVLKRGDGSVPEYDGSSDGHPATPGPQNTPEVRTLPPNSRYRTSLESGFPPDLHRPSR
QEEAERGRDGDGSDQMDYRGRQFNPHHHHTWNNDHSQSTRRPSPDDGGNKKSRGRKVKKS
ESESGISKLLKTLRKDSSGKKAAAAAAKLRGRELSGSSSTLDGRCRRRRRGSLDRSPTRQ
RAPSPDRRRAKSMDRRAHRDRTPERERDDGGFLAVTPERKFYERKLLKDSPGAAGRVGEA
ATPERAAVNNNNGDSLSLSRGRRAYDRATKNGNLLRDSSPERREERYPANGTPERYPANG
TLERYPTNGTPERYPANGTPERFPANGTPERRCRVERDSSPDSSYSRDEPNYAAAPRLVD
YFGAVKNNNNNNAAYNNAGHNNNAGGPNQLPEPKRRPFKESPKDLSI
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagtcctcctccagaggaagaaccactggatcaccacagtgaacgagtgcctg
gtgggccgggacgcgcgcggggagctgcgcgtggagctgcgcggcggcgcggagcgcgga
gagttcgcgtccgtcgggcgcgttgcggaggagggtctccgggacgggaggccgcgcgag
ggagagctgctcctggaggtgcagggccggcccgtggcgggactcccgctctacgacatc
tcctccgtgatgaagggctgcgacgggcccgtcaggctgaagaccgtgcgtcaaggtcac
gacctcaccaaggacctgaagctctacctgagccggagggtccgccgggcctcggccgac
caccggctgcaggagagcatccgggccaacctgtaccgccacgccacgccctgtacgacc
cgcccccctcgagacggagaggtcccaggggtggattacgacttcctgtccgtggaggac
ttcctcaaactcgaggacagcggcacgcttctggaaataggaacgtatgacggtaactat
tatgggacccccaagccgccgaggcagccccccggcggcgggacactgattctcggcgct
gcaggccgccggcgctccgagtccgacgatgacatgcaggacggccgcgtagcgcctggc
gcccatgacgatgaccaccgggacgcggaaatgaacaacagttttacaggtaaccccagc
gaccgggacgagggccgcggcgccctgcggccgtaccccgcccgcgacaacgctccgtcc
tgcggcctgaacaatgcggccgcctccaccgccgacagcggccagcagacgctcgccgcc
gagccgcaggcgtcgccggacgagccgcagggcccgatgcccgacaactgggaggcggcc
tacaccgagagcggcgagctctacttcatagaccacaacacgaagaccacgtcgtggatg
gacccccggtgtcgagacaaaggcccccggccgctggaggactgcgacgacgatgaaggg
atccacacggaggagctggacacggacctggagcttcctccgggatgggagcggatagaa
gacccggtgtacggggtctactacgtggatcacataaacaggaagacccagtacgagaac
ccggtggtggaggctcggcgccggacgatcctggagcagcagccgccgccgccgccgccg
ccgcaacctccagaagagtggatcgaggaacactcggaggcgactccgttggcgaactac
gcctcgaaccacctggagacctacagggacccccaggggccccccacgctgccccccacg
ctgccccccacgctgccccccatgcccggcggagccaaacgagggaagccgttcttcacc
aggaacccggcggagctgaagggagtcttcatcaacaccaagctgaagaagagccgccgc
ggcttcggcttcaccgtcgtcgggggcgacgagccggacgagttcctgcagatcaagagc
ctggtgctggacgggccggcggccgtggacggcaagatggagacaggcgacgtgatcgtg
agcgtgaacgacgtcgtggttctgggccacacccacgcccaggtggtgaagatcttccag
tccattcccatcggctccacggtggacctggcgctgtgccgcggctacccgctgcccttc
gaccccgacgaccccaacaccagcctggtgacctcggtggccatcgtggacaaggagccc
atcatcgtcaacgggcaggaggcgttccactcgccctgcggcgccgggggcccgcggccg
cgcagcccgtcggcggcgtccgagccggcgtccggcggctactccagcgacgtggtggac
atggcgtcgtccatcgccacgcagccggagctcatcaccatccacatggagaagggcgac
aagggcttcggcttcaccatcgccgacagcccgacgggcggcggccagcgcgtcaagcag
atcgtggattacccgcgctgccgcggcctgcgggaggccgacatcctggtggaggtcaac
aagaggaacgtgcagaacatgagccacaaccaggtggtggacctgctcagcaagtgcccc
cggggcagcgaggtcaccatgctggtgcagagaggagtggtgcaagccaagaggagtccg
aagctggtgcagcagctggagaggaaggacagccagagcagctcccagctcagcgtgtgc
agccatcgtagctccgcccacgccgactcccccggccacccggcggcgcccgccgccatg
ccgggcgacgcccccacgcagcctctgccgggtctcccccaccaccaggaccccgcggac
gccggcgccctcaccctgcagaagaagccggaccccttcaagatttgggctcagtcccgc
agcatgtacgagagccgcctgcctgactgccaggatcaggacatcttcctctggcggaag
gacacgggcttcggcttccggatcctgggaggaaacgaggccggcgagccgatctacatc
ggccacatcgtgaagtacggcgcggcggacgaggacggccgcctgcggtcgggcgacgag
ctcacctgcgtggacggcacggcggtggtgggcaagtcgcaccagctggtggtgcagctg
atgcagcaggcggccaagcagggccacgtcaacctcaccgtgaggcgcaagtccaccggc
caccccggtgagtccaccggccaaaccgaaggcggccgcgcctccgcgcctcctcaccac
agcagccagcaggccagcagcagcctggagnggggcagcgaccaggggagccagaactcc
ctcaacaccgtcagctccggcagcggctccaccagcggcatcggcagcggcggcggaggc
ggcggcggcagcgcggtggcgcccgcctccctgcagccgtacgacgtggagatccagcgc
ggcgagaacgagggcttcggcttcgtcatcgtgtcgtccgtctccagacccgacgccggc
accaccttcactggaaacgcttgcgtggccatgccccacaaaatcgggcgcatcatcgag
ggcagcccggcggaccgctgcgggaagctgaaggtgggcgaccggattctgtccgtgaac
tgctgctccatcaccaacaagtcgcactcggacatcgtcaacctgatcaaggaggccggc
aacacggtctcgctccggatcatcccaggtgatgaatcttccaacgcttctctgctgacc
aatgcggagaagatcgccaccatcaccaccacgcacacgcctcagcagaccgccgagtca
cggaataactcaaagtcaaaaggagctcctccccctccgcccacgcacagtcagaccgca
caggacgcagagttctactccgtggacctggagcgcgacagcaaaggcttcggcttcagc
ctgcggggaggacgggagtacagcatggacctgtacgtgttgaggctggcggaggacggc
gccgcggtcagaaacggcaagatgagggtgggagatgagatcctggagatcaacggcgag
accaccaagaacatgaagcactcgcgggccatcgagctgatcaagaacggcgggcggtgg
gcgcggctcgtcctcaagcggggcgacggatccgtacctgaatatgacggcagcagcgac
gggcaccctgccacgcccgggccacaaaacactccggaagtgagaacgctgccgccgaac
agccgatatcgcacctcgttggagtccggcttcccaccagaccttcacagaccatcacgc
caggaggaggctgagcgcggccgagacggggacggatccgatcagatggactaccgaggc
cggcagtttaacccccaccatcatcacacctggaataacgatcacagtcaaagcacccga
cggccgtctccggacgacggcggcaacaagaagagccggggccgcaaagtcaagaagtcc
gagtcggagagcggcatctccaaactcctgaagactctgaggaaagacagctcggggaag
aaggccgccgccgccgccgcgaagctcagggggcgggagctctcgggcagcagctccacc
ttggacgggaggtgtcggcggcggcgccgcggctccctcgaccgctcgccgacgcgccag
cgggccccgtctcccgaccgccggcgggccaagtctatggaccgcagggcgcaccgggac
cgcacaccggagagggagcgcgatgacggcggcttcctcgccgtcacgcccgagcgcaag
ttctacgagcgcaagctcctcaaggactcgccgggggccgccgggcgagtcggggaggcc
gcgacccccgagcgcgccgccgtcaacaacaacaacggggattccttgtccctctccagg
ggccgccgggcctacgaccgagccacgaagaacggcaacctcctgagagactcctccccg
gagaggagggaggagcggtacccggctaacgggactccggagcggtacccggctaatggg
actctggagcggtacccgactaacgggactccggagcggtacccggctaacgggactccg
gaacgcttcccggctaacgggactccggagcggcggtgccgagtggagcgggactcttcc
cccgacagcagctacagccgggacgagccgaactacgcggcggcacccaggctggtggat
tacttcggcgccgtgaagaacaacaacaataacaacgccgcctataacaacgcgggacac
aacaataacgcaggaggcccgaaccagctccccgagcccaagaggaggcctttcaaagag
agccccaaagaccttagcatctag
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integrated database retrieval system
