Pseudoliparis swirei (Mariana hadal snailfish): 130199919
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Entry
130199919 CDS
T09868
Symbol
rad51c
Name
(RefSeq) DNA repair protein RAD51 homolog 3
KO
K10870
RAD51-like protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03440
Homologous recombination
pswi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130199919 (rad51c)
03460 Fanconi anemia pathway
130199919 (rad51c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130199919 (rad51c)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
130199919 (rad51c)
FA (Fanconi anemia) pathway
Other FA pathway factors
130199919 (rad51c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
RecA
ATPase
DnaB_C
AAA_24
AAA_18
nSTAND3
Motif
Other DBs
NCBI-GeneID:
130199919
NCBI-ProteinID:
XP_056279746
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All DBs
Position
9:complement(28791762..28796508)
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AA seq
383 aa
AA seq
DB search
MLGQLSWRLVPEEASSSRRMQRPLCSVSLSPAARTRLLSAGFQFTSDLLPLKPLQLSKEA
GLTPLEALEVLQAVRRGEGGGGGGDGGGGGGLASLTALELLQKEEELKSIVTFSSQLDAA
LGGGVTVGRTTEICGAPGVGKTQLCLQLAVDVQVPPCFGGVGGQAVYIDTEGSFLLQRVV
DIAAAAVRHCSLLAEDDEQRVAMTTFTVETILANIFLVRCHDYVELLAEIHLLPDFLSEH
PKVRLLVIDSVAFPFRLHFDELSRRTRLLNGLAQQLIAMATGHSIAVLMTNQMTTRLLGG
RSQQVPALGESWGHAPTIRILLHWAGSRRLAAIFKSPEHMGSTVQYQITSEGFRDVDQSE
RPPSKRPRTDADQSAESRGDASL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgctgggacagctgtcatggcggctggtcccagaggaagccagctcgagccgcaggatg
cagcggccgctgtgcagcgtgtctctgagtcccgccgcgaggaccagactcctctccgcc
gggttccagttcacctccgacctgctgccgctgaaaccgctgcagctcagcaaagaggcc
ggcctgaccccgctggaggcgctggaggtgctgcaggccgtgaggaggggagaaggagga
ggaggaggaggtgatggaggaggaggaggcgggttagcctccctaacggccctggagctc
ctccagaaggaggaggagctgaagagcatcgtgacgttctcctctcagctggacgcggcg
ctcggaggaggagtcacagtcgggagaaccacggagatctgtggagcgccaggagtcgga
aaaacacaactttgcctgcagctggcggtggacgttcaggtgcctccgtgtttcgggggc
gtcggcggtcaggcggtctacatcgataccgagggcagcttcctgctccagagagtcgtc
gacatcgccgccgccgccgtccgacactgctccttattggccgaagacgatgagcaacga
gtcgccatgacgacctttactgtggaaaccatcctggccaacatattcctggtgcgttgt
catgactacgtggagctgctcgcagagatccacctgctgcccgacttcctgtccgaacac
ccgaaggtccgcctcctggtgatcgacagcgtggcgttccccttccggctgcactttgac
gagctgtctcgcaggacacgcctcctcaacggcctggcgcagcagctcattgccatggca
accggtcacagcatcgccgtgttgatgacgaaccagatgaccacccgactgctgggcggc
cgatcgcagcaggtccccgccctcggggagagctggggccacgcccccacgatcaggatc
ctcctacattgggcggggtcacggcggttggcagccatctttaaatccccagaacacatg
gggtccaccgtccaataccagataacctccgaggggttcagagatgtcgaccaatcggag
cggccgccgagcaaacgaccccggacagacgccgaccaatcggcggagagccggggagac
gccagcctctga
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