Pseudoliparis swirei (Mariana hadal snailfish): 130199919
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Entry
130199919 CDS
T09868
Symbol
rad51c
Name
(RefSeq) DNA repair protein RAD51 homolog 3
KO
K10870
RAD51-like protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03440
Homologous recombination
pswi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130199919 (rad51c)
03460 Fanconi anemia pathway
130199919 (rad51c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130199919 (rad51c)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
130199919 (rad51c)
FA (Fanconi anemia) pathway
Other FA pathway factors
130199919 (rad51c)
BRITE hierarchy
Motif
Pfam:
Rad51
AAA_25
RecA
ATPase
DnaB_C
AAA_24
AAA_18
nSTAND3
Motif
Other DBs
NCBI-GeneID:
130199919
NCBI-ProteinID:
XP_056279746
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All DBs
Position
9:complement(28791762..28796508)
Genome browser
AA seq
383 aa
AA seq
DB search
MLGQLSWRLVPEEASSSRRMQRPLCSVSLSPAARTRLLSAGFQFTSDLLPLKPLQLSKEA
GLTPLEALEVLQAVRRGEGGGGGGDGGGGGGLASLTALELLQKEEELKSIVTFSSQLDAA
LGGGVTVGRTTEICGAPGVGKTQLCLQLAVDVQVPPCFGGVGGQAVYIDTEGSFLLQRVV
DIAAAAVRHCSLLAEDDEQRVAMTTFTVETILANIFLVRCHDYVELLAEIHLLPDFLSEH
PKVRLLVIDSVAFPFRLHFDELSRRTRLLNGLAQQLIAMATGHSIAVLMTNQMTTRLLGG
RSQQVPALGESWGHAPTIRILLHWAGSRRLAAIFKSPEHMGSTVQYQITSEGFRDVDQSE
RPPSKRPRTDADQSAESRGDASL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgctgggacagctgtcatggcggctggtcccagaggaagccagctcgagccgcaggatg
cagcggccgctgtgcagcgtgtctctgagtcccgccgcgaggaccagactcctctccgcc
gggttccagttcacctccgacctgctgccgctgaaaccgctgcagctcagcaaagaggcc
ggcctgaccccgctggaggcgctggaggtgctgcaggccgtgaggaggggagaaggagga
ggaggaggaggtgatggaggaggaggaggcgggttagcctccctaacggccctggagctc
ctccagaaggaggaggagctgaagagcatcgtgacgttctcctctcagctggacgcggcg
ctcggaggaggagtcacagtcgggagaaccacggagatctgtggagcgccaggagtcgga
aaaacacaactttgcctgcagctggcggtggacgttcaggtgcctccgtgtttcgggggc
gtcggcggtcaggcggtctacatcgataccgagggcagcttcctgctccagagagtcgtc
gacatcgccgccgccgccgtccgacactgctccttattggccgaagacgatgagcaacga
gtcgccatgacgacctttactgtggaaaccatcctggccaacatattcctggtgcgttgt
catgactacgtggagctgctcgcagagatccacctgctgcccgacttcctgtccgaacac
ccgaaggtccgcctcctggtgatcgacagcgtggcgttccccttccggctgcactttgac
gagctgtctcgcaggacacgcctcctcaacggcctggcgcagcagctcattgccatggca
accggtcacagcatcgccgtgttgatgacgaaccagatgaccacccgactgctgggcggc
cgatcgcagcaggtccccgccctcggggagagctggggccacgcccccacgatcaggatc
ctcctacattgggcggggtcacggcggttggcagccatctttaaatccccagaacacatg
gggtccaccgtccaataccagataacctccgaggggttcagagatgtcgaccaatcggag
cggccgccgagcaaacgaccccggacagacgccgaccaatcggcggagagccggggagac
gccagcctctga
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