Pseudoliparis swirei (Mariana hadal snailfish): 130199933
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Entry
130199933 CDS
T09868
Symbol
si:dkey-11f4.7
Name
(RefSeq) piezo-type mechanosensitive ion channel component 2
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130199933 (si:dkey-11f4.7)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130199933 (si:dkey-11f4.7)
Membrane trafficking [BR:
pswi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
130199933 (si:dkey-11f4.7)
Ion channels [BR:
pswi04040
]
Other channels
Mechanosensitive channel (Piezo)
130199933 (si:dkey-11f4.7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_THU9_anchor
Piezo_cap
THU_Piezo1
FAM210A-B_dom
DUF1127
Motif
Other DBs
NCBI-GeneID:
130199933
NCBI-ProteinID:
XP_056279766
LinkDB
All DBs
Position
9:complement(9093770..9126236)
Genome browser
AA seq
2734 aa
AA seq
DB search
MCSFLCTSASSLRYNGLSVVYFLFLLSLPLMPNPSPTTMNGERSKTGLFLRNIIYTSLTF
LTLQCFMQIPFLYILPDVSGPWEDFLYHLGIVRFSSVDPGNILRLLAPDVGLLFSSLFVL
RLCNKLLRPVHKVNVHENGVPPSDAGEAETSESDSEEGSDTEGSDFDSSDETTVPVQSGP
PQFVQKMIVFAAGLRLLMAAIMNTAGQVVATLLLGLAGITLPSLTSGVYFGVFLCLVWCW
VFSRSISLLLFSSLCVMMAIFSGGHLLALYLYQLPLAQQIVPPEDIYARLFGMTGVVRTN
SSDPHILGLHPHVSWPDFINPLVLLLLYYTLVALLHKWANIIEEVCDGGMEASFQALLVT
DDDEECKSPVGSPQIPPSFSRAIYISGYNQELLSSTDDEIDFPGLLTGSSWQDVDENDLS
SLLGGAGYTNCFLPPQYNVKDSAPDDTEVEEEMEETCEENLKTLTETSPPPTGPSGLVIF
GLLVQKHSYVSALIIMMVWSITYNSWLTFALLVWSCIIWIMRDRRRYAMLSAPFLAAYGT
VLLVLGFLSGLRLSRAELYPGVPPTVIMDFDLNSYHPAPCVHLGAKVFYSFSFWLMFRQQ
LKERHEEQTLKEESLDEVKVLPPEESPPSPIAAMLISGVKGILVKYWILFCCSMFFVVSF
SGKVVVYKILYIVLFLFCVVLYQIRYDVWRRVLKTFWAVVVGYSMLVLIAIYMYQFRSVS
GLFRQIMGMSEEGLRDLGLERYDNVELFARILLPAVFLLACILQLHYFNSDFKTLTDLDN
VPVRQASREEELRSSVNLISETIKGLIQKFHDRLAKEEIGSGKSQETLNSIGLQSCSEKG
AGEPEETPEEETPASIREDKWVVIVERSSLLLIQALSGLYRLQDQSWRLLELHSLKIVSS
GIIWVSLQEVSLMNSVFLILWAFALPFPRLRPTASSVSAVWSCLMVVCKMFYQLKVIKPL
DYSSNCTAGLVPSNSSGLDDGAEVRENMVELLRRSILYIEPVDPIYWCGALLKCEGRILP
CLRNHLLVLGLLVFEATVHRHQLYFRLHNDLKSPPFSIIFHGITRQHLDHGVVPCIKYFI
NFCFYKFGLEISLIVAVNVIGQRMDFYALLHSCALLAVLSRRRRKAIGEVWPKYCCFTAG
LMVLQYLLCVGIPPALCADYPWRSAARPLTSNIIKWFYLPDFAMTPNPSFIFYDHLLLLC
SSLQWLVFEEENRAVVRLIAGDNVEISRSLDPCSFNQFIPVDNFLHCRCYLDMVKVFVFS
YFFWLVLCLIFITGTTRINIFCLGYLVACFYFMLFGSSVLMQPVKYILRLWDWLIGYTCF
VIAMKNLLSLGSCAYLDSLLKNSCWFIQAFSMFCTIKDYDLPAPDAECELPEGEAGIVWD
AICFTVLLAQRRVFLSYYFLYVVSDLKSSKILASRGAELFEARVKKQIAARLELEKKSVE
TLKKQMEKIKSKEKTGPKAAGKPAISADPKQEALPNTSDDEKAKQDTGKWWKPWVSRPGV
ENNCGYHLFESDSEEEEEEVIEKKDEVPPPPQKKTAFQLVYNAWVNSSKSTLEDLKREKK
SLQREETKRAKKELQRLQGIESTDSSDEEPDESIVEEEEEKENILQRVISNLKFFVVFIQ
YLLDDMTGGLNSFCKETLEISTVLRFERALLSQQQNKGKEVGQHSVKQFYESWRSRQNTL
SSQDDIEDCMPPPSLNDVPSSKHSYAKLKNQASKMSWGSSDSSCVTDETMLGSRQPTLEE
LDDPPDLSPAPHKIRRRLVKTANIDLPSFECMELSPSCEADVPQKTDHEQEEEDEEEMER
ETQCEQEQEDTEVEEQRGEECEVEREDLNDEAQQREENECADYSECSLLDIGESDGGKSL
ELIESLKPLSQETRNLTASELLLNNIFENYEISESDKFFCRLPRPLKLVISLYNTMVSKS
ELLCYFVIILNHIVTASLLSLILPILIFLWAMLSVPRPTKRFWMTAIVYTELTVVVKYFS
QFGFFPWTTSAYRGINAERPFAMPNIIGVEKKDGYVLFDLIQLLALFFHRSILKCHGLWD
NKEVEMPDFFKKMKKKVDKKKMGSKEKTQRRLKFSLKASTNSLFCRGKRGDSAESEEMKP
KKRQSRKKGQQREKAPLTRKERIRQLFREKMLQAKAAIIEVALHIYLPIRQFFYDIIHPD
YSPVCDVYALMFLIDVVNFIVTIYGYSAFGKYASVADISESLSEDQVPEAFLVMLLMQFG
TMIVDRAIYLKKSLMGKCVFQVTLVFGIHFWMFFILPGVTERRFNRNSIAQLWYFVKCIY
FGLSAYQIKCGYPNQILGNFLTKNFNFLNLFLFQGFRMVPFLTELRAVMDWVWTDTTLSL
SSWICVEDIYANIFILKCSRESDKKYPHTKGQKKKKVVKYGQGGFIIFALISIIWFPLLF
MSLVQSAAGVTNQPVEVSIQLSIAGYEPLFTMTAQEKNLVPYTESGFNRLIKVYATHPSA
MQFIMKYGADDIVVAKIKSDASLLWSISPASRAAMIQELSDSSYIYITLRWKLVRDPAIS
MVPETVGEHTVKYEDKALREGLVNMLNGNSSKPLIIDSLLPKFLKGPKGPESKMATRMTV
AHSDRPDLQDLAFFRPMSLQQVTEGPDQWWVVEECSPVPAFSKHKCQSIEMVVLNDKVSP
SSLGFLAGHGIVGLYMSVVLVVGKFVREFFNGISRSIMFEELPCVDRVLKLCTDIFVVRE
TGEMELEETLFEKLIFLYRSPETMVKMTREKKDS
NT seq
8205 nt
NT seq
+upstream
nt +downstream
nt
atgtgttctttcctctgcacctcagcgtcttcgctccgctacaatggcctgtcagtggtg
tatttcctgtttttgctctctttgccgctgatgccgaaccccagcccgaccaccatgaac
ggtgagagaagtaaaacaggtcttttcttgcggaatatcatctacactagtttgaccttc
ctgaccctgcagtgcttcatgcagatccccttcctctacatccttccagatgttagcggc
ccctgggaagatttcctctaccatttgggcattgtaagattcagctcggttgaccctggg
aacatcttgcgtcttctggccccagatgtgggcctcctcttctcctccctctttgtacta
aggctgtgcaacaaacttctgcgccccgttcacaaagtcaatgtgcatgagaacggagta
ccgccgtctgacgccggggaagcggaaacatctgaatcagactctgaggaaggaagtgac
acagagggctcggactttgacagctcagatgagactacggtgccggttcaatcgggtccg
ccccagtttgtccagaaaatgattgtttttgctgccggactgcggctgctaatggcagca
atcatgaacacagcagggcaagtggtggcgactttactgctggggctggcaggtatcacg
ctgccatccctcacctcaggtgtgtatttcggggtgtttctctgtctggtgtggtgctgg
gtgtttagccgctccatcagcctgctactcttcagctccctgtgcgtgatgatggcaatc
ttcagtggcggacacctgctggctctgtacctctaccagctgcctctggcacagcagatt
gtgccaccagaagacatatatgcaaggttgtttggtatgacaggagtggtcaggaccaac
agttcagatccgcacattcttggtctgcacccacatgtcagctggccggacttcatcaac
cctttggttctactgctgctctactacacactagtggctctgctgcacaaatgggccaac
atcatagaagaggtttgtgatggagggatggaggctagtttccaagctcttctagttact
gacgatgacgaagagtgtaagagtccagtaggaagtccacagattcctccaagcttctcc
agggccatctacatctcaggatacaatcaggagcttttgagcagcacggatgatgaaatc
gatttcccgggtttattgactggcagttcctggcaagatgtcgatgaaaatgacctcagc
tctctgttaggaggggcagggtatacaaactgtttccttccaccccagtacaatgtcaaa
gactcagcaccagatgatacagaagttgaggaagaaatggaagaaacctgtgaagagaac
ctgaagactctgacagagacctcccctccccccacaggccccagtggcctggtaatcttt
ggactgcttgtgcaaaaacacagctatgtcagcgcccttatcatcatgatggtgtggagc
atcacctacaacagctggctgacttttgccctgctggtgtggtcctgtatcatttggatt
atgcgagaccggcgccgctacgccatgctgtccgccccgttcctggctgcctacggcacc
gtgctgctggtgctgggcttcctaagcgggctgcggctgagtcgggccgagctgtatccc
ggggtgcccccgacggtgattatggacttcgacctgaacagctaccaccctgcgccctgc
gtccacctgggagccaaggtcttctacagcttcagcttttggttgatgtttcgtcagcag
ctaaaggagagacatgaggaacagaccttaaaagaggaatctctagatgaagtcaaagtc
ctgccaccggaggagagtccgccatcccctatagcagcgatgctgatctcaggagtgaaa
gggatacttgtgaaatactggatcctcttctgctgctccatgttcttcgtggtcagcttc
tctggaaaggtggtcgtctacaagatcctctacattgtcctcttcctcttctgtgttgtc
ctctatcagatccgttacgacgtgtggcgtcgggtgctgaagacgttctgggcggtggtg
gtcggttactccatgttggtgttgatagccatctacatgtaccagttcagaagtgtgtct
ggtctgttcagacagattatgggcatgtcggaggaaggtcttcgtgacctgggtttggaa
cggtacgacaacgtggagctgtttgcgcgcatcctgcttcctgctgtgtttctattggct
tgtatcctccagctgcactacttcaactcagactttaagactctcactgatctcgacaac
gtacctgttagacaggcctccagagaagaagagctcaggagttcagtcaatctgatttct
gagaccattaaaggactcattcaaaagtttcatgacagacttgcaaaggaggaaattgga
agtgggaaaagtcaggagactctgaacagcattggactacaatcctgctcagagaaagga
gctggagagccggaggagacaccagaggaggaaactcctgccagcattcgtgaggacaag
tgggtggtgattgtggagcggtcgagcctgctgctcattcaggctctgtcaggcctctac
aggctccaggaccagagctggaggctgctggaactccacagcctcaaaatcgtgtcctcc
ggcatcatctgggtgtcactgcaagaggtctcgctgatgaactcggtcttcctgattctg
tgggcgtttgcgcttccgttcccacggttacgaccgacggcgtccagcgtttctgcggtg
tggtcctgcctcatggtggtgtgcaagatgttttaccagctcaaagtcatcaaacccctt
gattactcctccaactgcaccgctggtctggtgccgtccaacagctcgggactggatgat
ggagcggaagtgagggagaacatggtggagctgctcaggaggtctattctctacatcgag
cccgtagaccccatctactggtgtggagcgctgcttaaatgtgaaggcaggatcctcccc
tgtctcaggaaccatctgctggtgctcgggctgctggtgtttgaggcgaccgtccatcgg
catcagctctacttccgtctccataacgacctaaagtccccacccttcagcatcatcttt
catggcatcacgaggcagcacctggatcacggcgtcgtgccctgcatcaagtacttcatc
aacttctgcttctacaaatttggactggagattagtttaattgtggcagtcaacgtgatc
ggtcagaggatggatttctatgccctcctccattcctgcgccttgttggcggttctgtca
cggcgacgcaggaaggccatcggggaggtgtggcctaaatactgctgctttactgcaggg
ctcatggtgctgcagtacctgctctgcgttggcatccctcctgctctatgtgctgattac
ccctggagatctgcagcacgacctttgacctctaatattataaagtggttttacctgccc
gacttcgccatgacacccaatccatctttcatattctatgaccacctcctgttgctctgc
tcgtctctgcagtggctggtgtttgaggaggagaaccgagcagtggtgcggctgattgcc
ggagacaacgttgagatcagccgcagtctggatccttgttccttcaaccagttcataccc
gtagataacttcctccactgcaggtgctacctcgacatggtgaaggtgtttgtgttcagc
tacttcttctggctggtgctgtgcctcatcttcatcaccggcaccacgcggatcaacatc
ttctgtctgggctacctggtggcctgtttctacttcatgttgtttggaagcagcgtgttg
atgcagcctgtcaaatacatcctgcgactgtgggactggctcatcggatacacctgcttt
gtgattgccatgaagaacctgctttctctcggttcttgtgcctacctggacagcctgttg
aagaacagctgctggttcattcaggcattcagcatgttctgcaccatcaaagactacgac
ctccctgctcctgacgctgagtgcgagctgccagagggtgaggccggcatcgtctgggat
gcgatctgtttcactgtcctcttggcacagaggagggtcttcctcagctactacttcctg
tatgtggtgtcggacctcaagtcgtctaagatattggcctccaggggcgctgagctgttt
gaggccagagtgaagaagcagatagcagccagattggagctggagaagaagtctgtggag
acactgaagaaacagatggagaagatcaaatctaaagagaagactgggcctaaagcagca
ggcaaaccagctatctctgctgatccgaagcaggaggcactgcctaacacgagtgatgat
gagaaggcaaagcaagatactggaaaatggtggaagccttgggtgtctcgacctggagtg
gaaaacaactgtggctaccacctgtttgaaagtgacagcgaggaggaagaggaggaagtt
atagagaagaaggacgaggtaccaccaccaccacagaagaaaactgctttccagttggtc
tacaacgcctgggtcaacagctctaagtcgactctggaggacctgaaaagggagaagaaa
tcactacagagagaagagacgaagagagcaaagaaagagctgcagagactgcagggcatt
gaatcaaccgactccagtgatgaggaaccggatgaaagcattgtggaggaagaggaggaa
aaagaaaacattctgcagcgcgtcattagcaacttgaagttcttcgtggtcttcattcag
tacctgcttgacgacatgactgggggtctgaactcattctgtaaagaaaccctggagatc
tccacggtgctgcgtttcgagcgcgcgttactcagccaacagcagaataagggtaaagag
gtgggccagcacagcgtgaagcagttttatgaaagctggaggtcccgtcagaacacactt
tcatctcaagacgatatcgaggactgcatgccccctccctccttgaatgatgtcccctcc
tcgaaacattcctatgccaagctcaagaaccaagcctccaagatgtcctggggcagcagc
gattccagctgcgtgacagatgagacgatgctcggctcccgccagccgaccctggaagag
ctggacgaccctcccgatttgtcgcctgcacctcacaagatcaggcggaggctcgtgaaa
acagcaaacattgacctgccctcctttgagtgtatggaactttcaccaagctgtgaagct
gacgtcccacaaaagacagaccacgaacaagaagaggaggatgaggaggagatggagcgg
gagacgcaatgtgagcaagagcaagaagacacagaggtagaggagcaacgaggagaggag
tgtgaggtggaaagggaagacctgaatgacgaagcgcagcagagagaagaaaatgaatgc
gctgattactcagaatgctcattgttggacatcggggagagtgatggagggaaaagcctg
gagctcatagaatctcttaaacccctgagtcaggaaacgaggaatcttactgccagtgag
ctgctgcttaacaatatatttgaaaattatgagatctcggagtccgacaagtttttttgt
aggttgccgaggcccctgaagctggtgatttccctctataacaccatggtgtccaagtca
gagttgctgtgctactttgtcatcatcctcaaccacatcgtcacggcttcactgctctcc
ctcatcctgcccattctcatcttcctctgggccatgctgtctgtgccccgaccaaccaaa
cgcttctggatgactgccattgtctacacagagctgactgtcgtggtgaagtacttttcc
cagtttggtttcttcccctggaccacctctgcctacagaggcatcaacgctgagcggccc
tttgctatgcccaacatcatcggggtggagaagaaagacggctatgttcttttcgacctc
attcagctacttgctctgtttttccatcgctctattctcaagtgccacgggctgtgggac
aacaaagaggtcgagatgccagatttctttaaaaagatgaagaagaaagtcgacaagaag
aagatgggcagcaaagaaaaaactcagcgccggctgaagttctctttaaaggcatccacc
aactccttattctgtcgaggaaagagaggcgactcagcagaatctgaagagatgaagccc
aagaagcggcaaagcaggaagaagggacagcaaagagagaaggccccgctgaccaggaag
gagagaattcgacagctgttcagagagaagatgctccaggccaaagctgccatcatagaa
gttgcccttcacatttacttacccatcagacagttcttctatgacatcatccacccagac
tacagtcctgtctgtgatgtctatgccctcatgtttctcatcgatgtggtcaacttcatc
gtcactatctatgggtactcggcttttgggaaatatgcttccgtagcagacatctcagag
tctctctcagaggaccaggtcccagaggccttcctggtcatgctgctcatgcaattcggc
accatgatagtggaccgggctatctacctgaagaagtccctcatgggaaagtgtgttttc
caggtgacgctggtgttcggcatacacttctggatgttcttcatcctccccggggtcacg
gaaaggaggttcaacagaaactctattgctcagctctggtactttgtcaagtgcatctac
ttcggcttgtctgcctatcagatcaaatgtggctacccaaaccaaatcctgggaaacttc
ctcaccaagaacttcaacttcttgaacctcttcctcttccaagggtttcgcatggttccc
ttcttgacagagctgagggccgtgatggattgggtttggaccgacaccactctgtctctc
tccagttggatttgtgttgaagacatctatgcaaacatattcatcctcaagtgctcgagg
gagtccgataaaaaatacccccacactaaagggcagaagaagaagaaagtggtgaaatat
gggcagggaggattcatcatcttcgcgctcatcagcatcatctggttcccgctcctcttc
atgtcgctggtccagtcggctgccggagtgaccaatcagccggtggaagtctctatccag
ctcagcatcgcaggatatgagcctctgttcaccatgaccgctcaggagaagaacttggtt
ccgtatacagaatctggattcaaccgactcatcaaggtctacgcgacccatccatctgct
atgcagttcataatgaaatatggggcggacgacattgttgttgctaagatcaagagtgat
gccagtctgctgtggagcatcagcccggctagtcgagccgccatgatccaggagctcagc
gactcctcttatatatacataaccttacgctggaagcttgtcagggatccggccatatcc
atggtgccagagacggtgggcgaacacactgtgaagtatgaggacaaggccttgagggaa
gggctcgtcaacatgctgaacggcaacagcagcaaacctttgatcattgattctctgcta
ccaaagttcctcaagggtcccaaaggaccagagtccaaaatggcaaccaggatgacagta
gcgcactcggaccggccagacctccaggacctggctttcttcaggcccatgtcactccaa
caggtcaccgaagggccagaccagtggtgggtggtggaggagtgctcccctgttcccgcc
ttttccaaacacaagtgtcaaagcatcgagatggtggtgttaaatgacaaagtcagcccc
tccagcctgggctttctggctggtcacggcatcgtaggcctgtacatgtcggtggtgctg
gtcgtcggaaagttcgtcagggagttcttcaacgggatctccaggtccatcatgtttgag
gagctcccgtgtgtggaccgggtcctgaagctctgcacggacatctttgtggtccgcgag
acgggagagatggagctggaggagacgctctttgagaaactcatcttcctctaccgatcg
ccagagacaatggtcaagatgaccagggaaaagaaggacagctag
DBGET
integrated database retrieval system
