Pseudoliparis swirei (Mariana hadal snailfish): 130200010
Help
Entry
130200010 CDS
T09868
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2
KO
K06550
L1 cell adhesion molecule
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130200010 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130200010 (l1cama)
04090 CD molecules [BR:
pswi04090
]
130200010 (l1cama)
04091 Lectins [BR:
pswi04091
]
130200010 (l1cama)
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
L1 family
130200010 (l1cama)
CD molecules [BR:
pswi04090
]
Proteins
130200010 (l1cama)
Lectins [BR:
pswi04091
]
I-type lectins (Siglecs)
130200010 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Bravo_FIGEY
C2-set_2
Ig_5
C2-set_3
Ig_4
Pur_ac_phosph_N
V-set_CD47
Ig_C17orf99
Herpes_gE_N
Ig_6
DUF4998
Motif
Other DBs
NCBI-GeneID:
130200010
NCBI-ProteinID:
XP_056279924
LinkDB
All DBs
Position
9:13385524..13424911
Genome browser
AA seq
1280 aa
AA seq
DB search
MADVLSYQTGFINHESHAVGSLGSVCLHAWHILWYQWQMGPLTPSVKRPPMIITQPESVT
VFSVEDLVMSCGATGNPQPIFRWTKDGVEFDPGSEPELKISERSGSFSFYTLSHTMDSVK
QYQAKYICYASNVLGTAVSNEARINTDVLPTQQKEKKVHMKSEEGNSIVLKCNPPQSSME
PIIHWMDWKLRHIQLSERVVVGKDGNLYFAHLTIEDNRNDYTCNVQYLATRTILAKEPIT
LTVNPSNSLLQNRRPQMLRPTGIHTTYHSLRGQTVELECIVQGLPTPKVSWLRSDGEMSE
SRIIKDMFNRRLRFNNISESDAGEYQCMAENSQGKATHTYTVTVEAAPHWIKEPPSQLYA
PGETVKLHCQADGIPAPTISWTINGIALSETDKDIRRSVTRSGFLTLMDVELGDTAVYQC
QASNKHGTILTNTNVYVIELPPQILTEDGTTYTFIEGQNALLECVSFGSPRPKVTWESGR
TSSLLEDPRVKPLTNGLLEISNVTHDDEGIYTCSVQNTNLSINAELEVLNRTVILSPPQD
LKVQRGNTTIFTCLSLVDPKLGSPLIQWRKDNQKISESYTDGKYTIDGPDLKITNVEEDD
EGVYTCQVITKHDMAEASGTLTLWDRPDPPVLLQITDPKHRAVTLSWTPGDDHNSAVLEF
VVEFEDQGLKESGWEELKRVTGNNQRASLPLWPYMSYRFRVTAINYVGKSGPSKPSEIHN
TLAEAPDNNPEDVRSESKDPETLFISWEEMDKRSFNGPDFKYRVQWRRVVGSGPRWHTND
TTTPPFTVNDIGNFSAFEIKVQSVNAKGKGPEPDPIIGYSGEDFPLEAPMNVGVVLMNST
TIKVNWAAVNKETVRGNLMGYKVYLTRIGSRSHHRGRRSREPESTLMVETVANEEEKVIS
DLRPYSHYVLFVTVFNSKGEGPPSETLSFKTHEGVPGPPMSLMLDSPSETEMTLHWTPPA
QPNGVLIGYVLEYQQIVESNDSPTQKQTIEDPIATHLTLRALDPHSQYRFLLRGRTTAGE
GELIMREGATTLDGAPPVKFNLTVGENSVNLSWVAKKRHRNVSFQIYYLNKNGASKWEKT
EVNSSQSFYQLQGLTPRSHYRLRFAYSNITLFEENIETLGTGVTEVQPSFATQGWFIGVV
CAIVLLLLILLILCFIKRSKGGKYSVKDKEEGPMDSEARPMKDETFGEYRSLESDLEEKR
TASQPSLGEESKLCSEDNLDFNGSSAITTELNMDESLASQFSRPSEGPDALHGLPDNSPL
NPTTVSPATSGMPNSVTILD
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttctcagctatcaaactggcttcatcaatcatgagtcccatgctgtcggc
tcccttggcagcgtgtgtctgcatgcctggcatatcctctggtaccagtggcagatgggc
ccgctgacaccctcagtcaagagacctccaatgatcatcactcagccggagtctgtcacc
gtctttagtgttgaagacctcgtcatgagctgtggagccactggcaaccctcaacccatt
ttccgatggacaaaggatggagtggagtttgacccaggcagtgagccagagctgaagatt
tctgagcgctctggctcattttcattctacacactcagtcacaccatggacagcgtgaag
cagtaccaggccaaatacatctgctatgcatccaacgtgctcgggacagccgtctctaat
gaggcccgcatcaacactgatgttctcccgacccagcagaaagaaaagaaggttcatatg
aagtcagaagagggaaacagtatcgttctgaagtgtaaccccccgcagagctccatggag
cctattattcactggatggactggaagctacgccatatccagctaagtgaacgggtggtc
gtggggaaggatggcaacctatactttgcccatttgacaatcgaggacaacaggaacgac
tacacctgcaatgtccagtacctggcgacacgcaccattctggcaaaggagcccatcacg
ctgaccgtgaacccttccaactctctacttcagaacaggaggccccagatgttaagacct
actggaatccacaccacttaccattccctcagaggccagaccgtggagcttgagtgcatc
gtccaaggccttccaactcccaaagtttcgtggctgaggagtgacggcgagatgtctgaa
tctcggatcattaaagatatgttcaaccgccgcctgcgcttcaacaatatctcagagagc
gacgccggcgagtaccagtgtatggctgagaactcccaagggaaggccacacacacttac
accgtcactgtagaagcggctccccactggatcaaggagccacccagtcagctatatgcc
ccaggtgagactgtcaagctacactgccaggcggacggcatccccgctcctaccatcagt
tggaccatcaacgggatcgctctctcagaaaccgacaaggacatcagacgttctgtgaca
aggagcggatttctaacactaatggatgtcgaactgggagacactgccgtctatcagtgc
caggcctccaacaagcatggaaccatcctcaccaacaccaacgtctatgtcattgagctg
cctccccagatcctgactgaggatggaactacatacacatttatagagggccagaacgct
ttactggagtgtgtaagctttggctctccgagacctaaagtcacatgggagagcggcagg
acctcctcccttctggaagatcccagagtgaagccgctcaccaacggactgcttgagatc
tctaatgtcacccatgacgatgagggcatctacacatgctccgtgcagaacaccaacttg
tctatcaatgccgagctggaagtgctcaacaggacagtgatcctgtcacctccacaggat
ctgaaggtgcagcgtggaaacacaacaatcttcacttgtctgtcccttgttgacccaaaa
cttggctctccactcattcagtggagaaaggacaatcaaaagatctctgagtcgtacact
gacggaaaatacacaattgatggaccagacctgaaaataactaatgtggaagaagatgat
gagggtgtgtacacctgtcaggtcatcactaagcatgacatggctgaagccagtggcacc
ctcactttatgggatcgtccagaccctcctgtcctgctccagatcactgatcctaagcat
cgtgcagtcaccctcagctggactcctggagacgaccacaacagcgccgtgctagagttt
gtagttgagtttgaggaccaaggcttgaaagagagtggttgggaagagctgaagagagta
acaggaaacaatcagcgcgctagcctccctctgtggccctacatgtcttaccgtttccgg
gttactgccatcaattatgtaggaaagagtggccccagcaagccatctgaaatccacaat
acactcgctgaagctccagacaataaccctgaagatgttaggagtgagtccaaagatcca
gagacgctattcatcagctgggaggaaatggacaaacgtagcttcaatggacctgacttt
aagtatcgtgttcagtggaggcgagtagtgggcagcggaccccgctggcacacgaacgac
acaacaacaccaccattcacagtcaatgacattggcaacttttctgccttcgagatcaaa
gttcagtctgtcaatgcgaaggggaagggacctgagccagatcccatcatcggttactca
ggagaagattttccattagaggctccaatgaatgtaggtgttgttttaatgaacagcact
accatcaaagtgaactgggcagcagtgaacaaagagacggtcagaggaaacctgatggga
tacaaggtctacttgaccagaattggctccaggagccaccacaggggccggaggtccagg
gagccagagagcactttgatggtggagactgtggccaacgaggaagagaaggtgatcagt
gatctcagaccatactcccactacgtgctgttcgtcactgtattcaacagcaagggagag
ggacccccctctgagacgctgtccttcaagactcatgagggagttcctggtcctcccatg
tccctgatgctggacagcccatcagagacagaaatgaccctccactggacgccacctgct
cagcccaatggagtcctcattggatatgtactagagtaccaacagattgtggagagcaat
gacagccccacgcagaaacagacaatagaggaccccatagccacccacctcaccctgagg
gccctggacccccacagccagtaccgcttcttgttgagggggcgcaccactgcaggggaa
ggagagctcatcatgagggagggggccaccacactggatggagcacctcctgtcaagttc
aacttaactgttggagaaaactctgttaacctcagctgggtggccaagaagagacacaga
aacgtcagcttccagatatactacctcaataaaaatggtgccagtaaatgggagaaaact
gaggtgaactcctcccagtctttctaccagctccagggcctgactcctcgctctcattat
cgtctacgcttcgcctacagcaacattaccttatttgaagagaacattgagaccttagga
acaggagtaactgaggtgcagcccagttttgcaacgcaaggctggttcatcggtgttgtg
tgcgccatcgtgctgctgctgctgatcctgctgatcctctgcttcatcaagaggagtaaa
ggggggaagtattcagtgaaagataaagaagagggtccgatggactcagaagcacggcct
atgaaggatgagacttttggagagtatagatctctagaaagtgacctcgaggagaagcgc
acggccagtcagccgtccctcggcgaggagagcaagctgtgcagcgaggacaacctggac
ttcaacggcagcagtgccataaccaccgagctcaacatggacgagtctctggctagccag
ttcagtcgtcccagcgagggtccagatgcgctgcatggcctaccagacaactccccgctc
aatcccaccaccgtctccccagctaccagtggcatgcccaactcggtcaccatcctcgat
taa
DBGET
integrated database retrieval system
