Pseudoliparis swirei (Mariana hadal snailfish): 130200024
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Entry
130200024 CDS
T09868
Symbol
dtx3
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130200024 (dtx3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130200024 (dtx3)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130200024 (dtx3)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130200024 (dtx3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-RING_4
zf-RING_10
zf-C3HC4_4
zf-RING_6
Prok-RING_4
RING_XB3-XBAT31
Baculo_IE-1
zf-RING_11
zf-Nse
Motif
Other DBs
NCBI-GeneID:
130200024
NCBI-ProteinID:
XP_056279943
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All DBs
Position
9:13065399..13070857
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AA seq
369 aa
AA seq
DB search
MGSQVSSDEMSVRAGQGSDEVLVSQAVWDYLAAAGRPWLIDFQLKQGMSAGIIRRGERGG
CCAVRLQPVEGFRNGGAGVMDGPISSETRKAFIDLCRCARKEMSKQDGGPKRKRALLPCV
GVLEPNGEGSLLQPPPPQPRRSQRQQQRFRKPADEEACAMLHEAAQRKDMDPSLASHNEA
EDNSTCSICMGDIVEKTTLERCGHSFCRSCLDQAFKVKKACPVCRLVYGQLIGNQPANGT
MIVERDSDLELPGHEGSGCICIIYSFPPGLQAPEHPNPGVRYPGTDRVAYLPGGPEGNRV
LGLLRRAFEQRLIFTIGTSMTTGMQNVITWNDIHHKTSIWGGPRCFGYPDPTYLVRVTEE
LREKGITAD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgggatcacaagtttcctctgatgagatgagtgtgcgtgctggccagggcagtgatgag
gtgctggtttcacaggcggtgtgggattacctggctgcagctgggcggccctggctcatt
gacttccagctcaagcaggggatgagtgctggtatcattaggcgaggggagagggggggc
tgctgcgctgtgaggctgcagccggtggagggcttcaggaacggtggcgctggggtgatg
gatggacccatctctagcgagacacggaaagctttcattgacttatgccgctgcgcccgc
aaagaaatgagcaaacaggacgggggacccaagaggaagagggctctgctgccctgtgtg
ggagtcctggagccaaacggagaggggagcctgcttcagcctccacctccacagcctcgg
cgctcccagagacagcagcagcggttcaggaagcctgctgatgaggaggcctgcgccatg
ctccatgaggcagcccagaggaaggacatggaccccagcttggcttcccataatgaggca
gaggacaacagtacttgttcaatctgtatgggggacatagtggaaaagactactttggag
aggtgtggccattcattctgtcgctcttgtctggatcaagcctttaaggtgaagaaagcg
tgccccgtgtgtcggctagtgtacggccagctcattgggaaccagcctgctaatggtaca
atgatcgtagagcgagattctgatctggagcttcctggccatgaaggcagtgggtgcatc
tgcatcatctacagcttccctcctggcctccaggcgccagaacaccccaacccaggtgtt
cggtacccaggaacagaccgcgtggcctacctccctggcggccctgagggaaaccgtgtg
ctgggtctgctgcgccgggcctttgaacagcgccttatcttcaccatcggtacctccatg
actacgggcatgcaaaatgtcatcacctggaatgacattcaccacaagacctcaatatgg
ggtgggccccgctgttttggctacccagaccccacttacctggtgcgagtgacagaggag
ctcagagaaaaaggcatcacggcagactga
DBGET
integrated database retrieval system
