Pseudoliparis swirei (Mariana hadal snailfish): 130200045
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Entry
130200045 CDS
T09868
Symbol
plxna1a
Name
(RefSeq) plexin-A1 isoform X1
KO
K06820
plexin A
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130200045 (plxna1a)
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GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
TIG_2
Sema
TIG_plexin
PSI
PSI_PlexinA-B
RasGAP
Motif
Other DBs
NCBI-GeneID:
130200045
NCBI-ProteinID:
XP_056279965
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All DBs
Position
9:complement(6074666..6331905)
Genome browser
AA seq
1903 aa
AA seq
DB search
MTSHLNPPLLIPPILFFLLLSLSAPSTSISISTSTPPSSLLSFLPPEGGLTHLVVHNKTG
EVYLGAVNWIYKLSSNLTKLRSHVTGPVTDNPRCYPPPGVQSCPHELVQTSNVNKLLLLD
AAHNRLIACGSTSQGICQFLRLDDLFKLGEPHHRKEHYLSSVAEAGTMSGVVISPDLFGG
GGKLFVGTPIDGKSEYFPTLSSRKLMSNEENAEMFSFVYQDEFVSSQLKIPSDTLSKFPA
FDIYYIYGFSSEQFVYYLTLQLDTQLTSPDASSEQFFTSKIVRLCVDDPKFYSYVEFPIG
CTKDGVEYRLVQDAYLARPGIRLARSLGIQEHEEVLFTVFAQGQKNRAKPPKETALCLFT
MKRIKEKIKERIQSCYRGEGKLSLPWLLNKELACINSPLQIDDNFCGQDFNQPLGGTTAI
EGIPLYVDKDDGMTSVTAYDYRGHTVAFTGTRGGRMKKILVNSITQPALLYENVVVSDGS
PILRDMLFSPDHQYLYALTNKQVNRVPVESCEQYSDCGACLGSGDPHCGWCVLHNVCSRK
NHCERAEEPQRFTTRVELCVRLSVQPNTISVTMSEVQLSLQTQNVPSLSAGVNCSFGDYV
ETEGRIYGGRIFCLSPSTKEVSPITRDQGDQRVIKLYLKSKETGKKFASVDFVFYNCSVH
QSCLSCVNGNFPCHWCKYRHMCTQDAGDCSFQEGRVNSSEECPQILPSTQIYMPAGVIRP
ITLLAQNLPQPQSGQRNYECIFHIQGSTHSVPALRFNSTSIQCQKTMYDYEGADISDLPV
DLSVVWNGNFVIDNPFNIQAHLYKCRALRDSCGMCLKAEPRFECGWCIHDRKCSLRQECT
GGGNFHLPLQPAEVGGWMHATSGNSRCTHPKITKLFPETGPRQGGTRVTILGENLGLQFR
DIKMGVRLGKVPCVPIEEEYVSAEKIVCLLNDATSYRVQEAQVEVCVRDCVNDYRALSPR
PFTFVTPYFSRIQPSQGPISGGTRITIEGSYLNAGSDVSVSIGPQPCSFKMRNAREIVCV
TPAGLATVGASLFVDIDDAELRNPEVKFNYTEDPTVLKIEPDWSIASGGTLLTVSGTNLA
TIREPKIRAKYGQAESFHNCTVYNNSVMVCLAPSLADSELGFPEAGTGPDEIGFYMDNVN
ALVVVNETFIYYPDPVFEPLSPSGILELKPTSPLILKGRNLIPAAPGNTRLNYTVLIGET
PCVLTLSESQLLCEWPNLTGQHKVTIRAGGFEYSPGTLHIYSDSLLTLPAIIGIGGGGGL
LLLVIIAVLIAYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDIHELTQELD
GAGIPFLDYRTYAMRVLFPGIEDHPVLKEMEVRVQANVEKALTLFGQLLTKKHFLLTFIR
TLEAQRSFSMRDRGNVASLIMTALQGEMEYATGVLKQLLSDLIDRNLESKNHPKLLLRRT
ESVAEKMLTNWFTFLLYKFLKECAGEPLFMLYCAIKQQMEKGPIDAITGEARYSLSEDKL
IRQQLDYKTLTLHCVNPENETAQEVTVKCLNCDTITQVKEKLLDAVYKGSPYSQRPKASD
MDLEWRQGRMARIILQDEDVTTKIDNDWKRLNTLAHYQVTDGSVIALVPKQNSAYNISNS
STFTKSLSRYESMLRTASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHSDQREGDRGSK
MVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHSITD
YDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHKLGK
DSPSNKLLYAKDIPNYKNWVERYYSDISRMPVISDQDMSAYLAEQSRLHLSQFNSMSALH
EIYSYIIKYKDEILSELQKDEQSRRQRLRGKLEQVIDTMALAS
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccacctcaacccacctcttctcattccccccatcctcttcttccttctcctc
tccctgtccgcgccctctacctccatctcaatctccacgtccactcctccctcctccctc
ctctccttcctcccaccggaagggggcctcacacatttggtggttcacaacaaaaccggc
gaggtctacctgggcgccgtcaactggatctacaagctgtcaagcaacctgaccaagcta
cggagccacgtcactggcccggtcacagacaaccctcgctgctaccctccacccggtgtc
cagtcctgcccccacgagctggtgcagacctctaatgtcaacaagctcctgctacttgat
gctgcccacaaccgcttgattgcctgtgggagtacctcccagggaatttgccagttccta
cgtctggatgatttgttcaagctgggcgaaccgcaccaccgtaaagagcattatctatcc
agcgttgccgaggcgggcaccatgtcgggcgtcgttatctctccggatctttttggcggc
ggcgggaagctttttgtcggcaccccgatcgacggtaaatcggagtacttcccaacacta
tccagccgcaagttgatgtccaacgaggagaatgctgagatgttcagcttcgtctaccag
gatgagtttgtctcctcgcagctgaagattccctccgacacgctgtcgaagttcccggcg
ttcgacatctactacatctacggcttcagcagcgagcagtttgtttattatctcaccctg
cagctcgacacccagctgacctcgccggacgcgagcagcgaacagttcttcacgtctaaa
atcgtgcgcctttgcgtcgacgatccaaagttctactcctacgtcgagttccccatcggc
tgcaccaaggacggagtggagtaccgcttggttcaggatgcttatttggcccggccgggg
atccgcttggcccgttcgctcggtattcaagagcacgaggaggttctgtttactgtattc
gcacagggtcagaagaacagagccaagccgcccaaggagacggctctgtgtctgttcaca
atgaaacggataaaggagaagattaaagagaggattcagtcgtgctacagaggagagggg
aaactctccctgccctggctgctcaacaaggagctggcctgcatcaactcgccgctgcag
atagacgacaacttctgcggccaggacttcaaccagcctctagggggcaccaccgccatc
gagggcatcccgctctacgtggacaaggacgacggcatgacctccgtgacggcctacgac
taccgcgggcacaccgtggcgttcacgggcacccgcggcgggcgcatgaagaagatcctg
gtgaactccatcacccagcctgccttgctgtatgagaatgtggtggtgagcgacgggagc
cccatcctgagagacatgctgttcagcccggaccaccagtacctatacgccctcaccaat
aagcaggtcaaccgtgtaccagtggagagctgcgagcagtacagcgactgtggagcctgt
ctgggatcaggggaccctcactgcggctggtgtgtactccataatgtatgttcgaggaag
aaccactgcgaacgagcagaggagcctcagcgtttcaccacccgagtggagctgtgcgtc
cggctctccgtccagcccaacacaatctccgtcaccatgtctgaagtgcagttgtcactt
cagacgcagaatgttcccagcctgtctgccggagtgaactgctccttcggggactatgtc
gagacagaaggacgcatctatgggggacggatcttctgcttgtccccttcaacaaaagag
gtgtcccccatcacacgagatcaaggtgaccaacgcgtgataaagttgtatctgaagtcg
aaggagacggggaagaagtttgccagcgtggactttgtcttctacaactgcagcgtccac
caatcgtgcctgtcctgcgtcaacggaaacttcccctgccactggtgcaagtaccgccac
atgtgcacgcaggacgccggcgactgctccttccaggaaggacgagtcaacagctcggag
gagtgccctcagatcctgccctccacccagatctacatgcccgccggagtcataaggccg
atcacgctgctggcccagaacctgccccagccacagtcgggtcagaggaactacgagtgc
atcttccacatccagggcagcacgcacagcgtcccggctctgaggttcaacagcaccagc
atccagtgtcagaagacgatgtatgactacgagggcgccgacatcagtgacctcccggtc
gacctctccgtggtgtggaatggaaactttgtgatcgacaacccgttcaacattcaagcc
cacctgtataagtgcagagcgttgcgggacagctgtggcatgtgcctgaaggccgagccc
aggttcgaatgcggttggtgcatccacgaccggaagtgctccctccggcaggagtgcacc
ggtggagggaatttccacctcccgctgcagccggcggaggtcggaggatggatgcacgcc
acctctggaaacagccgctgcacccaccccaagatcactaagttgttcccggagacgggg
cctcgccaagggggaaccagggtgaccatcctgggggagaacctgggtctacagttcaga
gacatcaagatgggggtccggctgggcaaggttccctgcgtgcctatcgaggaggagtac
gtgagtgcagagaagatagtgtgtctgctgaatgacgcgaccagctacagggtccaagaa
gctcaggtggaggtgtgtgtgagggactgcgtcaacgactacagagccctgtctcccagg
ccattcacctttgtgactccatacttcagccgcatccagccgtctcaggggcccatttcc
gggggcacccggatcaccatcgagggcagctacctcaacgcgggcagcgacgtatctgtc
agcatcggaccgcagccctgctccttcaaaatgaggaatgcccgcgagatagtgtgcgtg
acaccagccggattagcgacggtcggtgcatccctcttcgtggacatcgacgacgctgag
ctccgaaaccctgaggtcaagttcaactacaccgaagaccccacagtgctgaagatcgag
cctgactggagcattgccagcggtgggactctgctgacggtgagcgggaccaacctcgca
accatccgagaaccgaagatcagggccaagtacgggcaggcggaatcctttcataactgt
acggtgtacaacaactccgtcatggtgtgcctggctccctcgttggccgactcggagctg
gggtttcccgaggctggcacgggcccggacgagattggcttctacatggacaacgtgaac
gccctggtggtcgtcaacgagaccttcatctactatcccgaccccgtgttcgaaccgctc
agtccctccgggatactggagctcaagcccacgtcgccgctcattctcaagggccgtaac
ctgatcccagcggctccgggtaacactcgcctcaactacacggtgctgattggcgagact
ccctgcgtcctcaccctctctgagagccagctgctgtgtgaatggcccaacctcaccgga
caacacaaagtcacgattcgtgctggcgggttcgagtactcccccgggactcttcacatc
tactcggacagcctgctgacgcttcctgccattatcggcatcggcgggggtggcggcttg
cttctgttggtcatcatcgccgtgctgatcgcctacaagaggaagtcgagggacgctgac
cgcactctgaaacgtctacagctccagatggacaacctggagtccagagtggccctggag
tgtaaagaagcgtttgccgagcttcagacagacatccacgagctgacccaggagctggac
ggagctgggattcccttcctggactatcggacgtacgcaatgagggtcctgttcccgggc
attgaggaccaccctgtgctaaaggagatggaggtacgggtccaggcgaacgttgagaag
gctctgacgctgtttggccagctgctgacgaagaagcacttcctgttgacgttcatacga
accctggaggctcagaggtctttttccatgcgagaccgaggcaatgtggcatctctcatc
atgacagccctgcagggggagatggagtacgccaccggagtcctgaagcagctgctgtcc
gacctgatagacaggaacctggagagcaaaaaccatcccaagctgctgctcaggagaacg
gagtctgtcgctgagaagatgctgaccaactggtttacgttcctgctgtataagttcctc
aaggaatgtgccggggagcctctgttcatgctctactgtgccatcaagcagcagatggag
aaggggcccatagacgccatcacgggagaagcccgctactccctcagcgaggacaagctc
atccggcaacagctagactacaaaaccctgacgttgcactgcgtgaacccagagaacgag
accgcccaggaggtgacggtcaagtgtctgaactgtgacaccatcactcaggtcaaagag
aagctgctcgacgccgtgtacaagggcagcccctattcacagcggcccaaggcttccgac
atggacctggaatggcgccaaggtcgcatggcccgaatcattctgcaagatgaagatgtc
acaacaaagatcgacaacgactggaaacgactcaacacgttggctcactaccaggtgaca
gacggctccgtgatcgccctggtgccgaagcagaactctgcctacaacatctccaactcc
tccaccttcaccaagagcctcagcagatacgagagtatgctgaggacggccagtagtcca
gacagcctccgatcacgaacgcccatgataacccctgacctggagagcggaactaaattg
tggcatctggtgaagaaccacgaccattcggaccagagggagggcgaccgaggcagcaag
atggtctctgagatctatctgacacggctgctcgctacaaaaggtacgctgcagaagttt
gtggacgacctgttcgagaccatcttcagcacggcccacagaggcagcgcgctgccgctg
gccatcaagtacatgttcgacttcctggacgagcaggccgacaagcactccatcacggac
tacgacgtacggcacacctggaagagcaactgtcttcctctgcggttctgggtgaacgtc
atcaagaacccccagtttgtattcgacatccacaagaacagcatcacggacgcctgtctg
tccgtggtggcccagaccttcatggactcctgttcaacgtcagaacacaaactgggaaag
gactcgccctccaataagctcctctacgcgaaagacatccccaactacaagaactgggtc
gagaggtactactccgatatctcccgaatgccggtcatcagtgatcaggacatgagtgcc
taccttgcagagcagtcccgcctgcacctcagccagttcaacagcatgtcggcgctgcac
gagatctactcctacattatcaaatacaaagacgagatcctgtcggagttgcagaaggac
gagcagtcgcgccgacagcggctacgcggcaagctggagcaggtcatcgacaccatggcg
ctggccagctga
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