Pseudoliparis swirei (Mariana hadal snailfish): 130200052
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Entry
130200052 CDS
T09868
Symbol
clcnk
Name
(RefSeq) chloride channel K
KO
K05017
chloride channel Ka
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130200052 (clcnk)
Ion channels [BR:
pswi04040
]
Chloride channels
Chloride channel (CLC)
130200052 (clcnk)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
130200052
NCBI-ProteinID:
XP_056279977
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Position
9:complement(4711173..4738779)
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AA seq
707 aa
AA seq
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MTPTLQDKMKRPEEEEEDEEDQEAAGSGTVGEDDDRQRGNQSDTSYNETLLLADPWKPCR
RSRAAVKGWLLKLRGCLEAGCGMEWYGYAALGVSMAVLSFLMDLSVAKLLRAHQWLYTKL
RGNSLLQFFCWTLYPACLCAVGSSFSHNICPYSTGSGIPEVRTMLAGIEMPHYLSLTNMF
SKFLGLICTLAAGSTIFLGKVGPFVHLSTMVGAYLSNMCTLMQADKKEKAAGEMHVVASA
VGVASCFGAPFSGVLFSVEVMSSHFALEHYCPCFFSAACGALTFRLLPVWSGDGETPQAL
FKTNFPPALPFYPLELLLFAFLGLLCGAASRCFLLFHRRTLQFTKTNGVVLKMLTTEKAL
YSGAVALFLAALTFPPSAGQYMASTLGTKQLLTSLLDGRRWSSSHNASVQPGAESLLDWG
SSGSPLLSLAVFLLMKMWMLVVACTLPLPAGYFMPVFVYGAALGRLLGEGAAYVSSGQQW
ASINPGGYALAGAAAFSGAVTHNLSPALMALELTGQFSHALPILLATLLANALARSGHRP
SFYDALSISKRLPHLPSLVKACPRLPSTPVGQVLGANPVQLQKAAGPAEVQLAVNTSTHT
HIPVVDSHESQLLLGFVLRSELLMFLRHCRTETLEKHLDEVCRIYPTTVLISPHTTIQEA
HRVLSLVGGQSVCVADRGRLVGIITWPEMKRILEDLAKEIEAATHRK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgacacttcaagacaaaatgaagaggccagaggaggaagaggaggatgaggag
gatcaggaggctgccgggagcggaaccgtcggagaggacgacgaccggcagcgaggaaat
caatcggacacatcctataatgagactctgctccttgctgatccatggaaaccatgccga
cggtcccgtgcagcggtcaaaggctggctgctgaagctgcggggctgtctggaagctggc
tgtgggatggagtggtacggctacgccgcgctgggcgtgtccatggccgtcctcagcttc
ctgatggacctcagcgtggcgaagctgctgcgagcgcaccagtggctgtacaccaagctg
cggggcaacagtctgctgcagttcttctgctggactctttacccagcatgcctctgtgcc
gtcggatcgtcgttctcccacaacatctgtccctactccacaggctcggggatcccagag
gtgagaaccatgctggccggcattgagatgcctcattacttgtctctcactaacatgttt
tccaagttcctgggccttatctgcacactggcagccggcagcactattttcctgggcaaa
gtgggtccgtttgtgcatctctccaccatggtcggagcctacctgagcaacatgtgcact
ctcatgcaagccgataagaaggaaaaagctgctggagaaatgcacgttgtcgcctctgca
gtcggagtcgccagctgcttcggagcgcccttcagtggagtgttgttcagcgtggaagtg
atgagttctcactttgccctggagcactactgcccgtgtttcttctccgccgcctgcggg
gcgctgacgttccgcctgctgcccgtgtggagtggagatggagagactcctcaggcgttg
ttcaaaactaatttccctcctgccttacctttctacccactggagcttcttctgtttgcc
ttcctggggctgctgtgtggagccgcgagccgctgcttcctcctcttccaccggcgcacg
ctgcaattcaccaaaaccaacggcgtcgtcctcaaaatgctgacgacggagaaggcgctc
tactccggcgcggtggccctcttcctggcagcgctgacatttcctccctctgctggtcaa
tatatggcttccacgctcggcacgaagcagctcctgacctccttgctggatggcaggcgg
tggagctcttcccacaatgcatctgtccaaccgggggccgagtctttattggactggggc
tcgtccgggagcccgctcctttctctggctgtctttctgctcatgaagatgtggatgctg
gtcgtcgcctgcactctgcctctgccagctggatacttcatgccagtgtttgtctacggg
gcagctttgggccgtttgcttggagaaggggcagcttacgtgtcctcaggccagcagtgg
gcttctatcaatccggggggctacgcacttgctggtgcggccgccttctccggggctgtg
acacacaacttgtccccggccctgatggctttagagctaaccggtcagttcagccacgct
ctgcccatcctcctcgccactctgctggccaatgccctggctcgctctgggcaccgcccc
tctttctatgacgctctctccatcagcaagaggctcccacacctgccctctttggtgaag
gcgtgccctcggcttccctccacgcccgtcggacaggttttgggagcgaacccggtgcag
ctccagaaagcagccgggccggcggaggtccagctggctgtcaacaccagcactcacaca
cacatccctgtggtggactcacacgagtcgcagcttctactgggctttgttctccggtcg
gagctgctgatgttcctgcgtcactgcaggacggagactctggagaaacatctggatgaa
gtctgccgcatctacccgaccactgtcctgatatcgcctcacaccaccattcaggaggcc
cacagggtcctgagtctggtcggaggtcagagcgtgtgtgtcgcagacaggggacggctg
gtcgggatcatcacatggccggagatgaagagaatattagaagacttggcaaaagaaatc
gaagcagcgacacacaggaaataa
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