Pseudoliparis swirei (Mariana hadal snailfish): 130200092
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Entry
130200092 CDS
T09868
Name
(RefSeq) tubulin alpha-1C chain-like
KO
K07374
tubulin alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04145
Phagosome
pswi04210
Apoptosis
pswi04530
Tight junction
pswi04540
Gap junction
pswi04814
Motor proteins
pswi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130200092
09143 Cell growth and death
04210 Apoptosis
130200092
09144 Cellular community - eukaryotes
04530 Tight junction
130200092
04540 Gap junction
130200092
09142 Cell motility
04814 Motor proteins
130200092
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130200092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130200092
03036 Chromosome and associated proteins [BR:
pswi03036
]
130200092
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130200092
04147 Exosome [BR:
pswi04147
]
130200092
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130200092
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
130200092
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
130200092
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130200092
Exosomal proteins of other body fluids (saliva and urine)
130200092
Exosomal proteins of colorectal cancer cells
130200092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
130200092
NCBI-ProteinID:
XP_056280032
LinkDB
All DBs
Position
9:complement(19617516..19619182)
Genome browser
AA seq
465 aa
AA seq
DB search
MQENTEWSKLQIVVFLQRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQVPSGKTSGG
GDDSYNTFFSETGAGKHVPRAVFVDLEPTVIDEVRSGIYRQLFHPEQLITGKEDAANNYA
RGHYTIGKDVIELVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKK
SKLEFSIYPAPQVSTAVVEPYNAILTTHTTLEHSDCSFMVDNEAIFDICRSNLNVERPSY
SNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKACHE
QLTVAEITNSCFEPANQFVKCDPRHGKYMACCLLYRGDVVPKDVNAAIANIKTKSSIRFV
DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAF
VHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSVGDDEEGEEF
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaatactgaatggtcaaagttacaaattgttgttttcctccagcgtgagtgt
atctccatccacgtcggccaggccggggtccagattggcaatgcctgctgggagctttac
tgcctggaacatgggatccagccggacggacaggtgcccagtggaaagacctccggagga
ggagacgattcctacaacaccttcttcagtgagactggagccggaaagcacgtccccaga
gccgtgtttgtggatctggagcccactgtcatcgatgaggtgcgcagtggtatttaccgc
cagctgttccaccctgagcagctgatcactggtaaggaggatgctgccaacaattacgcc
cgtggacactacaccatcggcaaggatgtcattgaactggtgctggacaggatccgcaaa
ctgtcggaccagtgcaccggccttcagggcttcctggttttccacagctttggcggtggc
accggctctggcttcacctctctgctgatggagcgtctgtctgtcgactacggcaagaag
tccaagctggagttctccatctacccagctccccaggtgtccaccgctgtggtggagccc
tacaacgccatcctgaccacccacaccaccctggagcactccgactgttccttcatggtc
gataacgaggccatcttcgatatctgccgtagtaacctcaatgtcgagcgtccctcttac
agcaacctgaacaggttgatcagtcagattgtgtcctccatcaccgcttcccttcggttc
gatggcgccctcaatgttgatctgacagagttccagaccaacttggtgccatatccccgt
atccacttccctctggccacctatgcccccgtcatctctgctgagaaagcttgccatgag
cagttaacggtggccgaaatcaccaactcctgctttgaaccagccaatcaatttgtgaaa
tgtgaccctcgccacggtaaatacatggcctgctgccttttgtatcgtggtgatgtggtg
cccaaagatgtgaatgctgccattgccaacattaaaaccaagagttcaatcaggtttgtg
gactggtgccccactggtttcaaggtgggcatcaactaccagccgcccactgtagttcct
ggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaacaccactgctatt
gcagaggcctgggctcggcttgaccacaagtttgatctgatgtacgctaagcgtgccttt
gtccactggtatgtgggtgaaggtatggaggagggagagttctctgaggccagagaggac
atggcagctctggagaaggattacgaggaggttggagctgatagcgtcggagacgatgag
gagggagaagagttttaa
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