Pseudoliparis swirei (Mariana hadal snailfish): 130200126
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Entry
130200126 CDS
T09868
Name
(RefSeq) ubiquitin conjugation factor E4 B-like isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04120
Ubiquitin mediated proteolysis
pswi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130200126
04120 Ubiquitin mediated proteolysis
130200126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130200126
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130200126
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
U-box type E3
130200126
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
130200126
NCBI-ProteinID:
XP_056280095
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Position
9:complement(11498108..11509882)
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AA seq
638 aa
AA seq
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MEELSADEIRRRRLARLAVGQTSQPGTPLSTPVTSPQRETPPGPLPGPSGVAPQPLPPAS
SQSLGLNVHSGTPAMSPVGTSGVVYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVEDSDRREKRNLPEKEASANSDVSEEQALQLICKILRVS
WKEQDRDVIFLPSMAAEFHQNPKDVYSDFKDLIGQILMEVLMMSTQSRVHNPFASLTATS
QPIAAAKSPDHRLTLVQPSSQGGSPMGPSAGSFGASSLSSLYGCGSPQSMALDAAKRTSP
SLPAPTTPTVPSTPSTPQFIVPPSPPASATPRHILNSPSAPMPISQRYRPYSVTSPWGAP
SPASPGQSGFTFLGPSLSPAGPSVPPNTPVPVPPPSPQSLSLSSPRVPNQPSSTSLSMVP
PSPRSNTRQAAFASRIPPSSPLSVLSFALSDMSQDSSDDDSEEEDFARVQFGSSLGASGG
VMSCNSASDRFTIETCKETEMLNYLIERFDSVGMEERKAPKICSQPNVSQLLSNIRSQCI
SHISLVLQGTLTQPRSPLHQSLLVPYLLCRNLPYGFIPELVRITHQEEGAFSQIFTPILH
GLALAVKECSFDSDNFKFPLMVMRRCPGLTNTVVPSMS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagcgcagacgagatccgcagaaggcgactggcaagattggcagtggga
cagacgtcacagcccggcacccctctcagcacacctgtgacatctccacagagagagacc
ccccctggacccctccctggaccctcaggtgtcgcaccccagcccctgccaccagcttcc
tctcaatcattggggctcaatgtacacagtggtacccctgccatgtcccctgtgggcacc
tccggggtggtctatggtagtcagagcagcgagggcgtgagctccctctccagctccccc
tccaacagccttgagactcagtcccagagtctgtcccgatcacagagtatggacattgac
actgcctcctgtgaaaagagcatgtcccaggtggatgtggactcagggatagagaacatg
gaggtggaggacagcgatcgcagggagaagaggaacttgcctgaaaaggaagcctctgca
aactcagacgtctcggaagaacaagctctgcagctcatttgtaagatcctccgcgtatcg
tggaaggagcaggatagagatgtcatctttctcccgtcaatggctgcagagtttcaccag
aaccctaaagatgtatactctgactttaaagacttgatcggccagatcctgatggaagtc
ttaatgatgtccacccagtcccgagtccacaaccctttcgccagcttgaccgccacctct
cagccaattgcagcagccaaatccccagaccaccgtctgacgctagtgcagccctccagc
caaggtggcagccccatgggccccagtgcagggtcctttggagccagctccctgtccagt
ctgtatgggtgtggtagtcctcagtcgatggcattggatgcagctaagaggacctcccca
tctctccccgcccctactacacccactgtaccctccacaccctctaccccacaattcata
gtgcccccgagcccacccgctagtgctactccacgacatatactcaactctccatctgcc
ccaatgcccatctcacaacgctatcggccttactctgtcacctctccttggggggctcct
tccccagctagtcctggtcaaagcggatttactttcttaggaccctctctgagccctgca
gggccctctgttcctcctaacaccccagttcctgtgccacctcccagcccccaatccctc
tccttgagctcacccagggttcccaaccaaccctcctccacatccctttccatggtgccc
ccttctcccagatcgaatacccgacaggccgcctttgcttccaggatcccaccgtctagc
cccttgtcggtcctgtcctttgccctctctgacatgtctcaggacagcagtgatgacgat
tctgaggaggaggattttgcacgggttcagtttgggtccagtctcggtgcatctggagga
gtaatgtcctgcaattcagccagcgaccgcttcaccattgagacttgcaaagagacagag
atgctgaactacctcattgagcgttttgacagtgttggcatggaggagagaaaagctccc
aagatttgtagccaaccaaatgtcagccagcttctcagcaacattcgctctcagtgtatt
tctcatatttccctggtcctgcaaggcaccttgacccagccacggagccctctgcatcag
tctttgctggtaccttatctgctgtgtcgaaaccttccatatggctttattccagagctg
gtgcgcatcacccaccaggaggaaggggccttcagtcagatcttcactcccatcctccat
gggctggctcttgcagtgaaagaatgttccttcgacagtgacaactttaaatttcccctt
atggtaatgagacgttgtcctggtctgaccaatactgtagtaccaagcatgagttga
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