Pseudoliparis swirei (Mariana hadal snailfish): 130200141
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Entry
130200141 CDS
T09868
Symbol
zmp:0000000926
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130200141 (zmp:0000000926)
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Gene cluster
GFIT
Motif
Pfam:
AXH
Nucleocapsid-N
Motif
Other DBs
NCBI-GeneID:
130200141
NCBI-ProteinID:
XP_056280122
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Position
9:23786720..23803371
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AA seq
693 aa
AA seq
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MNPSHDRGKECLPPKKRESRQGSAERRVPLDEFKPPVPLRSRSCGGGGGEGGGGDGGREA
GERALLHPNPHLLHTPPPLPAPGLPLPLPWHVSYSPSVSLPLFPGQVAERRVSGSPAAWR
DDPLPSPLPHHSRWLRGEGPLSLPPSSSCAPSSSFKTPFPADSREIWSYINSGRRDNSSS
LFSPSYLFGHHSLYAQDPSFAEAHRHRYLGKRPNGLEGPGSRTASASRPLLTGEYGNDRT
RLDIGPHSSHTNGGRRQQDDLISRVHAGGPFLPDSQAQEGPEPHSSLQDRHLHGIVKASP
HPLGPVPRAGRGGLLDPLGVTPAEAQIYYTLGSVCQPCPQVQAYPLYSPSGTALYNLHRE
PGPRQHTLRNLPHSPLGLANSHDRSQRDRDRDHERDREKLRGKDKEKPPQQDKDPVRDGE
RERRRERDGDGGREPSPPRLHASPPGLQPPPPELLPHFSKGSLIELASGRLKRVEELRTE
DFLRSADTSPEFHLSTCTVLLISPGGAQGFSHLQVHLKDRNTQELLKVLVEYPFFVQDRG
WSSCCPQRTTQLYGLQCRQLMEGDVCLALTPAPTPTPAQTHRTQTRVGPRAQRTQLLPSR
AAGETGNSHREEMPPPPPPPPLPHHPPPAAPAPPPLPPPPPPPPRAPAVKPPAPEERPRP
RKRRWSAPDTLPSTGTDDSLRDLPHGCKLMKWQ
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccagccacgaccgcggcaaagagtgcctccctcccaagaagagggagtctcgg
caaggatcggcggagcgccgcgtccctctggacgagttcaaacccccggtgccgctccgg
agtcggtcctgcggaggaggaggaggagaaggaggaggaggggacggaggcagggaggcc
ggtgaacgggctctgcttcacccaaacccccatctcctccatactcctccaccccttccg
gctccaggcctccccctgcccctgccatggcacgtcagctattctccctccgtctccctc
ccccttttcccggggcaggtcgccgagcggagggtctccgggtctcccgccgcctggaga
gacgatcccctcccctcgcccctgccccaccactccaggtggctccgaggggaagggccc
ctctccttgccaccttcctcctcctgcgccccgtcctcctccttcaagactcccttcccg
gccgattcccgagagatatggtcctacattaacagcggccggcgggacaacagctcctcc
ctcttctccccgtcgtacttgttcggccaccactccctctacgctcaagatccgagcttt
gccgaagcacacagacacagatacctgggcaagaggcccaacggcctggaggggcccggc
agcaggactgcctccgcctccaggcccctgctcacaggagaatatgggaacgacaggacc
aggctggacatcggtccacacagctcccacaccaacggtgggcggaggcagcaggacgat
ctaatatcccgcgtccacgccggagggccatttttgccagactctcaagctcaggaaggc
cccgagccacattcctcactgcaggacagacatttgcatgggatagttaaggccagtccc
catcctctgggaccggtccccagggcaggccgagggggactgttggaccccctcggcgtc
acaccagccgaagcccagatctactacaccttgggatcggtgtgccaaccgtgccctcag
gtccaggcctacccgctctacagcccctcaggaaccgctctgtacaacctgcacagggag
cccggacccaggcagcacactctgaggaacttgccgcactcccccctgggtctagccaac
agccacgacaggtcgcaaagagaccgggaccgagaccacgagagagacagagagaaactc
agggggaaagacaaagagaagcccccgcaacaggacaaagacccagtgagggacggcgag
cgcgagagacgacgggagagagacggagacggagggagggagccgtcgccgcctcgtctt
cacgcctcgccgccgggccttcagccgcctccccccgagctcctacctcacttcagcaag
ggttctctgatcgagttggccagcggtcggttgaagcgggtggaggagctgcggaccgag
gacttcctgaggagcgccgacacctccccggagttccacctcagcacctgcaccgtgctg
ctgatttcccccggcggcgcgcaaggcttcagccacctgcaggtccacctcaaggaccgc
aacactcaggagctcctgaaggtcttggtggagtacccgttcttcgtgcaggaccgaggc
tggtcttcttgctgcccccagagaaccacgcagctgtacggcctgcaatgccgccagctc
atggagggggacgtctgcctggctctcacccccgcccccacccccacccccgcccaaacc
caccggacacaaacgcgcgtcggccccagggcccaacgcacgcaactcctcccctcgcgg
gctgcgggagagaccggcaactcgcacagggaggagatgccgcctcctcctcctccgccc
cctcttcctcaccacccacctcctgccgcgccggcccctcctcctcttcctcctcctcct
cctcctcctccgcgtgctccggccgtcaagcctcccgccccggaggagcggccgcgtcca
cgcaaacggcgctggtctgccccggataccctcccctcaactggaactgatgacagcctc
cgggatttacctcacggctgcaagctaatgaagtggcagtag
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